RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 C9orf170A2RU37 121 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 ZNF729A6NN14 1252 aaPredicted RBP4.72□□□□□ -1.65
CHD2-227ENST00000637572 TM4SF5O14894 197 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 RAB29O14966 203 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 FOXH1O75593 365 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 CDS2O95674 445 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 IGFBP3P17936 291 aaPredicted RBP4.72□□□□□ -1.65
CHD2-227ENST00000637572 MC5RP33032 325 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 HIST1H3AP68431 136 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 BAXQ07812 192 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 ANKRD39Q53RE8 183 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 PHYHD1Q5SRE7 291 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 HIST2H3PS2Q5TEC6 136 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 SLC35E4Q6ICL7 350 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 FAAP20Q6NZ36 180 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 ZNF529Q6P280 563 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 HIST2H3AQ71DI3 136 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 RFESDQ8TAC1 157 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 ZNF355PQ9NSJ1 428 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 TREM2Q9NZC2 230 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 JPT1Q9UK76 154 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 HLA-DQB1P01920 261 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 TAGLN2P37802 199 aaKnown RBP4.72□□□□□ -1.65
CHD2-227ENST00000637572 BSPH1Q075Z2 132 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 BAMBIQ13145 260 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 C1orf229Q6ZS94 237 aaPredicted RBP4.72□□□□□ -1.65
CHD2-227ENST00000637572 TGIF2LYQ8IUE0 185 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 TGIF2LXQ8IUE1 241 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.72□□□□□ -1.65
CHD2-227ENST00000637572 C14orf79Q96F83 325 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 UHRF2Q96PU4 802 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 CSAG2Q9Y5P2 127 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 PLXNB3Q9ULL4 1909 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 MUC22E2RYF6 1773 aaPredicted RBP4.72□□□□□ -1.65
CHD2-227ENST00000637572 MYO7BQ6PIF6 2116 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 A0A1W2PN81 502 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 C17orf100A8MU93 164 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 F6UZH7 168 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 TXNL1O43396 289 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 MELTFP08582 738 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 PI3P19957 117 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 RPL12P30050 165 aaKnown RBP4.72□□□□□ -1.65
CHD2-227ENST00000637572 BMI1P35226 326 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 CHRNA7P36544 502 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 LPAR6P43657 344 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 TAS2R45P59539 299 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 OR2B8PP59922 312 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 PSG7Q13046 419 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 HMGN3Q15651 99 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 ATP6V1FQ16864 119 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 Q3ZCU0 254 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 SPSB4Q96A44 273 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 WBP1Q96G27 269 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 LURAP1Q96LR2 239 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 Q9N2K0 584 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 SLC35D1Q9NTN3 355 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 OPN4Q9UHM6 478 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 FLVCR2Q9UPI3 526 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 CADP27708 2225 aa4.71□□□□□ -1.65
CHD2-227ENST00000637572 ODAMA1E959 279 aa4.71□□□□□ -1.66
CHD2-227ENST00000637572 ZNF705EA8MWA4 302 aaPredicted RBP4.71□□□□□ -1.66
CHD2-227ENST00000637572 K7N7A8 449 aa4.71□□□□□ -1.66
CHD2-227ENST00000637572 LANCL1O43813 399 aa4.71□□□□□ -1.66
CHD2-227ENST00000637572 MMP7P09237 267 aaPredicted RBP4.71□□□□□ -1.66
CHD2-227ENST00000637572 NQO2P16083 231 aa4.71□□□□□ -1.66
CHD2-227ENST00000637572 S100PP25815 95 aa4.71□□□□□ -1.66
CHD2-227ENST00000637572 CHATP28329 748 aa4.71□□□□□ -1.66
CHD2-227ENST00000637572 CD80P33681 288 aa4.71□□□□□ -1.66
CHD2-227ENST00000637572 GZMKP49863 264 aa4.71□□□□□ -1.66
CHD2-227ENST00000637572 DEFA5Q01523 94 aa4.71□□□□□ -1.66
CHD2-227ENST00000637572 MEF2CQ06413 473 aaPredicted RBP4.71□□□□□ -1.66
CHD2-227ENST00000637572 GVQW1Q8N7I0 195 aa4.71□□□□□ -1.66
CHD2-227ENST00000637572 NUP37Q8NFH4 326 aa4.71□□□□□ -1.66
CHD2-227ENST00000637572 LILRB4Q8NHJ6 448 aa4.71□□□□□ -1.66
CHD2-227ENST00000637572 ZNRF4Q8WWF5 429 aa4.71□□□□□ -1.66
CHD2-227ENST00000637572 BBC3Q96PG8 261 aaPredicted RBP4.71□□□□□ -1.66
CHD2-227ENST00000637572 LPAR2Q9HBW0 351 aa4.71□□□□□ -1.66
CHD2-227ENST00000637572 PROK2Q9HC23 129 aa4.71□□□□□ -1.66
CHD2-227ENST00000637572 CBLN4Q9NTU7 201 aa4.71□□□□□ -1.66
CHD2-227ENST00000637572 PSENENQ9NZ42 101 aa4.71□□□□□ -1.66
CHD2-227ENST00000637572 PRNDQ9UKY0 176 aa4.71□□□□□ -1.66
CHD2-227ENST00000637572 M0R036 132 aa4.71□□□□□ -1.66
CHD2-227ENST00000637572 TNFSF12O43508 249 aa4.71□□□□□ -1.66
CHD2-227ENST00000637572 FCGR3BO75015 233 aa4.71□□□□□ -1.66
CHD2-227ENST00000637572 IGHV3-13P01766 116 aa4.71□□□□□ -1.66
CHD2-227ENST00000637572 ACKR3P25106 362 aa4.71□□□□□ -1.66
CHD2-227ENST00000637572 EFNB2P52799 333 aa4.71□□□□□ -1.66
CHD2-227ENST00000637572 UCP3P55916 312 aa4.71□□□□□ -1.66
CHD2-227ENST00000637572 PPP1R1AQ13522 171 aa4.71□□□□□ -1.66
CHD2-227ENST00000637572 ZNF79Q15937 498 aa4.71□□□□□ -1.66
CHD2-227ENST00000637572 TMUB2Q71RG4 321 aa4.71□□□□□ -1.66
CHD2-227ENST00000637572 TMEM104Q8NE00 496 aa4.71□□□□□ -1.66
CHD2-227ENST00000637572 LINC01560Q8TB33 94 aa4.71□□□□□ -1.66
CHD2-227ENST00000637572 SCARB1Q8WTV0 552 aa4.71□□□□□ -1.66
CHD2-227ENST00000637572 PPP1R1CQ8WVI7 109 aa4.71□□□□□ -1.66
CHD2-227ENST00000637572 SLC25A38Q96DW6 304 aa4.71□□□□□ -1.66
CHD2-227ENST00000637572 SOX7Q9BT81 388 aa4.71□□□□□ -1.66
CHD2-227ENST00000637572 SMIM3Q9BZL3 60 aa4.71□□□□□ -1.66
CHD2-227ENST00000637572 SLC39A9Q9NUM3 307 aa4.71□□□□□ -1.66
CHD2-227ENST00000637572 TMEM106BQ9NUM4 274 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms