RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 CEBPGP53567 150 aa14.59□□□□□ -0.07
NEK3-206ENST00000611833 SNRPEP62304 92 aaKnown RBP14.59□□□□□ -0.07
NEK3-206ENST00000611833 TLE4Q04727 773 aa14.59□□□□□ -0.07
NEK3-206ENST00000611833 TESK1Q15569 626 aa14.59□□□□□ -0.07
NEK3-206ENST00000611833 SHEQ5VZ18 495 aa14.59□□□□□ -0.07
NEK3-206ENST00000611833 ZNF497Q6ZNH5 498 aa14.59□□□□□ -0.07
NEK3-206ENST00000611833 ZNF561Q8N587 486 aa14.59□□□□□ -0.07
NEK3-206ENST00000611833 UNKLQ9H9P5 680 aaKnown RBP14.59□□□□□ -0.07
NEK3-206ENST00000611833 TMEM9BQ9NQ34 198 aa14.59□□□□□ -0.07
NEK3-206ENST00000611833 COA4Q9NYJ1 87 aa14.59□□□□□ -0.07
NEK3-206ENST00000611833 KIAA1456Q9P272 454 aa14.59□□□□□ -0.07
NEK3-206ENST00000611833 CACNG5Q9UF02 275 aa14.59□□□□□ -0.07
NEK3-206ENST00000611833 TXNL1O43396 289 aa14.59□□□□□ -0.07
NEK3-206ENST00000611833 CEACAM1P13688 526 aa14.59□□□□□ -0.07
NEK3-206ENST00000611833 ZNF14P17017 642 aaPredicted RBP14.59□□□□□ -0.07
NEK3-206ENST00000611833 TAS2R30P59541 319 aa14.59□□□□□ -0.07
NEK3-206ENST00000611833 RAB2AP61019 212 aa14.59□□□□□ -0.07
NEK3-206ENST00000611833 ERVS71-1P61550 626 aa14.59□□□□□ -0.07
NEK3-206ENST00000611833 Q6ZRM9 215 aa14.59□□□□□ -0.07
NEK3-206ENST00000611833 THNSL2Q86YJ6 484 aa14.59□□□□□ -0.07
NEK3-206ENST00000611833 TMEM178AQ8NBL3 297 aa14.59□□□□□ -0.07
NEK3-206ENST00000611833 LOC400499M0QZD8 3231 aa14.59□□□□□ -0.07
NEK3-206ENST00000611833 PCNX2A6NKB5 2137 aa14.58□□□□□ -0.07
NEK3-206ENST00000611833 A0A1W2PPE2 198 aa14.58□□□□□ -0.08
NEK3-206ENST00000611833 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.58□□□□□ -0.08
NEK3-206ENST00000611833 J3QW42 95 aa14.58□□□□□ -0.08
NEK3-206ENST00000611833 SH2D1BO14796 132 aa14.58□□□□□ -0.08
NEK3-206ENST00000611833 IGLV2-14P01704 120 aa14.58□□□□□ -0.08
NEK3-206ENST00000611833 TGFBR3Q03167 851 aa14.58□□□□□ -0.08
NEK3-206ENST00000611833 FAM24BQ8N5W8 94 aa14.58□□□□□ -0.08
NEK3-206ENST00000611833 LSM10Q969L4 123 aaKnown RBP14.58□□□□□ -0.08
NEK3-206ENST00000611833 GMPPAQ96IJ6 420 aaPredicted RBP14.58□□□□□ -0.08
NEK3-206ENST00000611833 KIAA1324LA8MWY0 1029 aaPredicted RBP14.58□□□□□ -0.08
NEK3-206ENST00000611833 WDR1O75083 606 aa14.58□□□□□ -0.08
NEK3-206ENST00000611833 GRPP07492 148 aa14.58□□□□□ -0.08
NEK3-206ENST00000611833 ZNF806P0C7X5 589 aa14.58□□□□□ -0.08
NEK3-206ENST00000611833 RAB5AP20339 215 aa14.58□□□□□ -0.08
NEK3-206ENST00000611833 CEACAM6P40199 344 aa14.58□□□□□ -0.08
NEK3-206ENST00000611833 ERVK11-1P61568 191 aa14.58□□□□□ -0.08
NEK3-206ENST00000611833 WSB1Q9Y6I7 421 aa14.58□□□□□ -0.08
NEK3-206ENST00000611833 hCG_1809904A0A1W2PP81 198 aa14.57□□□□□ -0.08
NEK3-206ENST00000611833 A0A1W2PR64 198 aa14.57□□□□□ -0.08
NEK3-206ENST00000611833 A0A1W2PRV1 198 aa14.57□□□□□ -0.08
NEK3-206ENST00000611833 SYNGR2O43760 224 aa14.57□□□□□ -0.08
NEK3-206ENST00000611833 IGKV1-39P01597 117 aa14.57□□□□□ -0.08
NEK3-206ENST00000611833 IGKV1D-39P04432 117 aa14.57□□□□□ -0.08
NEK3-206ENST00000611833 WNT2P09544 360 aa14.57□□□□□ -0.08
NEK3-206ENST00000611833 IAPPP10997 89 aa14.57□□□□□ -0.08
NEK3-206ENST00000611833 EIF2S3LQ2VIR3 472 aaKnown RBP14.57□□□□□ -0.08
NEK3-206ENST00000611833 SLC25A40Q8TBP6 338 aa14.57□□□□□ -0.08
NEK3-206ENST00000611833 LIN7CQ9NUP9 197 aaKnown RBP14.57□□□□□ -0.08
NEK3-206ENST00000611833 LYZL6O75951 148 aa14.57□□□□□ -0.08
NEK3-206ENST00000611833 HBE1P02100 147 aa14.57□□□□□ -0.08
NEK3-206ENST00000611833 PGA5P0DJD9 388 aa14.57□□□□□ -0.08
NEK3-206ENST00000611833 IGHV1-2P23083 117 aa14.57□□□□□ -0.08
NEK3-206ENST00000611833 ALKBH6Q3KRA9 238 aa14.57□□□□□ -0.08
NEK3-206ENST00000611833 DPPA3Q6W0C5 159 aa14.57□□□□□ -0.08
NEK3-206ENST00000611833 ZNF295-AS1Q8N0V1 137 aa14.57□□□□□ -0.08
NEK3-206ENST00000611833 GCNT2Q8N0V5 402 aa14.57□□□□□ -0.08
NEK3-206ENST00000611833 SCGB1C1Q8TD33 95 aa14.57□□□□□ -0.08
NEK3-206ENST00000611833 PSENENQ9NZ42 101 aa14.57□□□□□ -0.08
NEK3-206ENST00000611833 OR14J1Q9UGF5 321 aa14.57□□□□□ -0.08
NEK3-206ENST00000611833 TNFSF10P50591 281 aa14.56□□□□□ -0.08
NEK3-206ENST00000611833 RBMXL1Q96E39 390 aaKnown RBP14.56□□□□□ -0.08
NEK3-206ENST00000611833 OR2C1O95371 312 aa14.55□□□□□ -0.08
NEK3-206ENST00000611833 IGKV1-5P01602 117 aa14.55□□□□□ -0.08
NEK3-206ENST00000611833 SRP19P09132 144 aaKnown RBP14.55□□□□□ -0.08
NEK3-206ENST00000611833 RAC2P15153 192 aa14.55□□□□□ -0.08
NEK3-206ENST00000611833 AGAP20933 346 aa14.55□□□□□ -0.08
NEK3-206ENST00000611833 ZNF146Q15072 292 aa14.55□□□□□ -0.08
NEK3-206ENST00000611833 TRIP6Q15654 476 aaKnown RBP14.55□□□□□ -0.08
NEK3-206ENST00000611833 ADAM5Q6NVV9 412 aa14.55□□□□□ -0.08
NEK3-206ENST00000611833 URB1O60287 2271 aaKnown RBP14.55□□□□□ -0.08
NEK3-206ENST00000611833 H3BQ15 152 aa14.55□□□□□ -0.08
NEK3-206ENST00000611833 SCAF4O95104 1147 aaKnown RBP14.55□□□□□ -0.08
NEK3-206ENST00000611833 METTL15P1P0C7V9 234 aa14.55□□□□□ -0.08
NEK3-206ENST00000611833 MEOX2P50222 304 aa14.55□□□□□ -0.08
NEK3-206ENST00000611833 SOX8P57073 446 aa14.55□□□□□ -0.08
NEK3-206ENST00000611833 ICAM4Q14773 271 aa14.55□□□□□ -0.08
NEK3-206ENST00000611833 FIP1L1Q6UN15 594 aaKnown RBP14.55□□□□□ -0.08
NEK3-206ENST00000611833 H0YL77 283 aa14.54□□□□□ -0.08
NEK3-206ENST00000611833 CD200P41217 278 aa14.54□□□□□ -0.08
NEK3-206ENST00000611833 PSG7Q13046 419 aa14.54□□□□□ -0.08
NEK3-206ENST00000611833 SRSF6Q13247 344 aaKnown RBP14.54□□□□□ -0.08
NEK3-206ENST00000611833 ZNF585BQ52M93 769 aa14.54□□□□□ -0.08
NEK3-206ENST00000611833 OBP2BQ9NPH6 170 aa14.54□□□□□ -0.08
NEK3-206ENST00000611833 MBNL3Q9NUK0 354 aaKnown RBP14.54□□□□□ -0.08
NEK3-206ENST00000611833 KCNIP1Q9NZI2 227 aa14.54□□□□□ -0.08
NEK3-206ENST00000611833 WIPI2Q9Y4P8 454 aa14.54□□□□□ -0.08
NEK3-206ENST00000611833 C5orf52A6NGY3 159 aa14.54□□□□□ -0.08
NEK3-206ENST00000611833 EIF3GO75821 320 aaKnown RBP eCLIP14.54□□□□□ -0.08
NEK3-206ENST00000611833 WISP2O76076 250 aa14.54□□□□□ -0.08
NEK3-206ENST00000611833 HAND1O96004 215 aa14.54□□□□□ -0.08
NEK3-206ENST00000611833 HSPB1P04792 205 aaKnown RBP14.54□□□□□ -0.08
NEK3-206ENST00000611833 FBP1P09467 338 aa14.54□□□□□ -0.08
NEK3-206ENST00000611833 SELEP16581 610 aa14.54□□□□□ -0.08
NEK3-206ENST00000611833 CEBPDP49716 269 aaPredicted RBP14.54□□□□□ -0.08
NEK3-206ENST00000611833 RPS23P62266 143 aaKnown RBP14.54□□□□□ -0.08
NEK3-206ENST00000611833 GABRA6Q16445 453 aa14.54□□□□□ -0.08
NEK3-206ENST00000611833 ZNF506Q5JVG8 444 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms