RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.74□□□□□ -0.69
CTSA-213ENST00000606782 SERTAD4Q9NUC0 356 aa10.74□□□□□ -0.69
CTSA-213ENST00000606782 PITPNC1Q9UKF7 332 aa10.74□□□□□ -0.69
CTSA-213ENST00000606782 KCNK7Q9Y2U2 307 aa10.74□□□□□ -0.69
CTSA-213ENST00000606782 IGHV2-26A0A0B4J1V2 119 aa10.73□□□□□ -0.69
CTSA-213ENST00000606782 MEX3AA1L020 520 aaKnown RBP10.73□□□□□ -0.69
CTSA-213ENST00000606782 UBE2QL1A1L167 161 aa10.73□□□□□ -0.69
CTSA-213ENST00000606782 HSPB6O14558 160 aa10.73□□□□□ -0.69
CTSA-213ENST00000606782 CTDSP2O14595 271 aa10.73□□□□□ -0.69
CTSA-213ENST00000606782 XRCC3O43542 346 aa10.73□□□□□ -0.69
CTSA-213ENST00000606782 HPGDSO60760 199 aa10.73□□□□□ -0.69
CTSA-213ENST00000606782 CA11O75493 328 aa10.73□□□□□ -0.69
CTSA-213ENST00000606782 APOA1P02647 267 aa10.73□□□□□ -0.69
CTSA-213ENST00000606782 EDDM3AQ14507 147 aa10.73□□□□□ -0.69
CTSA-213ENST00000606782 ATXN7L3Q14CW9 347 aaPredicted RBP10.73□□□□□ -0.69
CTSA-213ENST00000606782 ZNF260Q3ZCT1 412 aa10.73□□□□□ -0.69
CTSA-213ENST00000606782 CDNFQ49AH0 187 aa10.73□□□□□ -0.69
CTSA-213ENST00000606782 NKAPLQ5M9Q1 402 aa10.73□□□□□ -0.69
CTSA-213ENST00000606782 RTN4RL2Q86UN3 420 aa10.73□□□□□ -0.69
CTSA-213ENST00000606782 KLHDC1Q8N7A1 406 aa10.73□□□□□ -0.69
CTSA-213ENST00000606782 TPRX1Q8N7U7 411 aa10.73□□□□□ -0.69
CTSA-213ENST00000606782 FAM110DQ8TAY7 271 aaPredicted RBP10.73□□□□□ -0.69
CTSA-213ENST00000606782 DCUN1D5Q9BTE7 237 aa10.73□□□□□ -0.69
CTSA-213ENST00000606782 CLEC7AQ9BXN2 247 aa10.73□□□□□ -0.69
CTSA-213ENST00000606782 MIXL1Q9H2W2 232 aa10.73□□□□□ -0.69
CTSA-213ENST00000606782 DIABLOQ9NR28 239 aa10.73□□□□□ -0.69
CTSA-213ENST00000606782 ETAA1Q9NY74 926 aa10.73□□□□□ -0.69
CTSA-213ENST00000606782 A3GALT2U3KPV4 340 aa10.73□□□□□ -0.69
CTSA-213ENST00000606782 PLXNB1O43157 2135 aa10.72□□□□□ -0.69
CTSA-213ENST00000606782 ODAMA1E959 279 aa10.72□□□□□ -0.69
CTSA-213ENST00000606782 MMP23AO75900 390 aa10.72□□□□□ -0.69
CTSA-213ENST00000606782 OPN1MWP04001 364 aa10.72□□□□□ -0.69
CTSA-213ENST00000606782 EIF4EP06730 217 aaKnown RBP10.72□□□□□ -0.69
CTSA-213ENST00000606782 OPN1MW2P0DN77 364 aa10.72□□□□□ -0.69
CTSA-213ENST00000606782 OPN1MW3P0DN78 364 aa10.72□□□□□ -0.69
CTSA-213ENST00000606782 GNB3P16520 340 aa10.72□□□□□ -0.69
CTSA-213ENST00000606782 ELK1P19419 428 aa10.72□□□□□ -0.69
CTSA-213ENST00000606782 CDK2P24941 298 aa10.72□□□□□ -0.69
CTSA-213ENST00000606782 CD34P28906 385 aa10.72□□□□□ -0.69
CTSA-213ENST00000606782 ARL6IP1Q15041 203 aa10.72□□□□□ -0.69
CTSA-213ENST00000606782 OR52W1Q6IF63 320 aa10.72□□□□□ -0.69
CTSA-213ENST00000606782 HEPN1Q6WQI6 88 aa10.72□□□□□ -0.69
CTSA-213ENST00000606782 ZNF565Q8N9K5 539 aa10.72□□□□□ -0.69
CTSA-213ENST00000606782 PRSS22Q9GZN4 317 aa10.72□□□□□ -0.69
CTSA-213ENST00000606782 WNT10AQ9GZT5 417 aa10.72□□□□□ -0.69
CTSA-213ENST00000606782 RIMS4Q9H426 269 aaPredicted RBP10.72□□□□□ -0.69
CTSA-213ENST00000606782 ABCB10Q9NRK6 738 aa10.72□□□□□ -0.69
CTSA-213ENST00000606782 TAS2R3Q9NYW6 316 aa10.72□□□□□ -0.69
CTSA-213ENST00000606782 TRAV18A0A075B6X5 111 aa10.71□□□□□ -0.69
CTSA-213ENST00000606782 TRBV6-6A0A0A6YYG2 114 aa10.71□□□□□ -0.69
CTSA-213ENST00000606782 TMEM30CPA0ZSE6 113 aa10.71□□□□□ -0.69
CTSA-213ENST00000606782 SERPINE3A8MV23 424 aa10.71□□□□□ -0.69
CTSA-213ENST00000606782 MFNGO00587 321 aa10.71□□□□□ -0.69
CTSA-213ENST00000606782 NAPSAO96009 420 aa10.71□□□□□ -0.69
CTSA-213ENST00000606782 HIST1H1DP16402 221 aaKnown RBP10.71□□□□□ -0.69
CTSA-213ENST00000606782 GZMHP20718 246 aa10.71□□□□□ -0.69
CTSA-213ENST00000606782 HTR1DP28221 377 aa10.71□□□□□ -0.69
CTSA-213ENST00000606782 PNLIPRP3Q17RR3 467 aa10.71□□□□□ -0.69
CTSA-213ENST00000606782 ZNF880Q6PDB4 577 aa10.71□□□□□ -0.69
CTSA-213ENST00000606782 OR4P4Q8NGL7 312 aa10.71□□□□□ -0.69
CTSA-213ENST00000606782 MCFD2Q8NI22 146 aa10.71□□□□□ -0.69
CTSA-213ENST00000606782 NEK7Q8TDX7 302 aa10.71□□□□□ -0.69
CTSA-213ENST00000606782 PHF21AQ96BD5 680 aa10.71□□□□□ -0.69
CTSA-213ENST00000606782 LINC00574Q9H8X3 128 aa10.71□□□□□ -0.69
CTSA-213ENST00000606782 ING3Q9NXR8 418 aa10.71□□□□□ -0.69
CTSA-213ENST00000606782 OR6C3Q9NZP0 311 aa10.71□□□□□ -0.69
CTSA-213ENST00000606782 DPM3Q9P2X0 92 aa10.71□□□□□ -0.69
CTSA-213ENST00000606782 AK3Q9UIJ7 227 aa10.71□□□□□ -0.69
CTSA-213ENST00000606782 KIF25Q9UIL4 384 aa10.71□□□□□ -0.69
CTSA-213ENST00000606782 MEIKINA0A087WXM9 373 aa10.7□□□□□ -0.7
CTSA-213ENST00000606782 A0A087X0M5 115 aa10.7□□□□□ -0.7
CTSA-213ENST00000606782 TRGV10A0A0A0MS01 117 aa10.7□□□□□ -0.7
CTSA-213ENST00000606782 A0A1B0GX30 115 aa10.7□□□□□ -0.7
CTSA-213ENST00000606782 TPPPO94811 219 aa10.7□□□□□ -0.7
CTSA-213ENST00000606782 IGLV1-47P01700 117 aa10.7□□□□□ -0.7
CTSA-213ENST00000606782 HLA-DQB1P01920 261 aa10.7□□□□□ -0.7
CTSA-213ENST00000606782 GSTP1P09211 210 aaKnown RBP10.7□□□□□ -0.7
CTSA-213ENST00000606782 VSIG10L2P0DP72 767 aa10.7□□□□□ -0.7
CTSA-213ENST00000606782 PLA1AQ53H76 456 aa10.7□□□□□ -0.7
CTSA-213ENST00000606782 KPRPQ5T749 579 aaPredicted RBP10.7□□□□□ -0.7
CTSA-213ENST00000606782 HACD4Q5VWC8 232 aa10.7□□□□□ -0.7
CTSA-213ENST00000606782 TMEM219Q86XT9 240 aa10.7□□□□□ -0.7
CTSA-213ENST00000606782 ABHD12Q8N2K0 398 aa10.7□□□□□ -0.7
CTSA-213ENST00000606782 MRPL30Q8TCC3 161 aaKnown RBP10.7□□□□□ -0.7
CTSA-213ENST00000606782 CMSS1Q9BQ75 279 aaKnown RBP10.7□□□□□ -0.7
CTSA-213ENST00000606782 GAL3ST2Q9H3Q3 398 aa10.7□□□□□ -0.7
CTSA-213ENST00000606782 AUNIPQ9H7T9 357 aa10.7□□□□□ -0.7
CTSA-213ENST00000606782 MBNL3Q9NUK0 354 aaKnown RBP10.7□□□□□ -0.7
CTSA-213ENST00000606782 ELF5Q9UKW6 265 aaPredicted RBP10.7□□□□□ -0.7
CTSA-213ENST00000606782 HILPDAQ9Y5L2 63 aa10.7□□□□□ -0.7
CTSA-213ENST00000606782 F2RL2O00254 374 aa10.69□□□□□ -0.7
CTSA-213ENST00000606782 RGS5O15539 181 aa10.69□□□□□ -0.7
CTSA-213ENST00000606782 MNDAP41218 407 aa10.69□□□□□ -0.7
CTSA-213ENST00000606782 BLCAPP62952 87 aa10.69□□□□□ -0.7
CTSA-213ENST00000606782 HABP2Q14520 560 aaPredicted RBP10.69□□□□□ -0.7
CTSA-213ENST00000606782 C17orf58Q2M2W7 97 aa10.69□□□□□ -0.7
CTSA-213ENST00000606782 CNPY1Q3B7I2 92 aa10.69□□□□□ -0.7
CTSA-213ENST00000606782 Q6ZPA2 131 aa10.69□□□□□ -0.7
CTSA-213ENST00000606782 C16orf82Q7Z2V1 217 aa10.69□□□□□ -0.7
CTSA-213ENST00000606782 TRAPPC6BQ86SZ2 158 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms