RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 TRBV5-5A0A0J9YX44 114 aa13.91□□□□□ -0.18
SHKBP1-227ENST00000602011 SC5DO75845 299 aa13.91□□□□□ -0.18
SHKBP1-227ENST00000602011 RGS11O94810 467 aa13.91□□□□□ -0.18
SHKBP1-227ENST00000602011 HBZP02008 142 aa13.91□□□□□ -0.18
SHKBP1-227ENST00000602011 IGHV3-43DP0DP04 118 aa13.91□□□□□ -0.18
SHKBP1-227ENST00000602011 FSTP19883 344 aa13.91□□□□□ -0.18
SHKBP1-227ENST00000602011 FUT3P21217 361 aa13.91□□□□□ -0.18
SHKBP1-227ENST00000602011 ZNF134P52741 427 aa13.91□□□□□ -0.18
SHKBP1-227ENST00000602011 F2RL1P55085 397 aa13.91□□□□□ -0.18
SHKBP1-227ENST00000602011 ZNF260Q3ZCT1 412 aa13.91□□□□□ -0.18
SHKBP1-227ENST00000602011 FAM27D1Q5T7N8 215 aa13.91□□□□□ -0.18
SHKBP1-227ENST00000602011 RAB12Q6IQ22 244 aa13.91□□□□□ -0.18
SHKBP1-227ENST00000602011 OR1N2Q8NGR9 330 aa13.91□□□□□ -0.18
SHKBP1-227ENST00000602011 OR2S2Q9NQN1 319 aa13.91□□□□□ -0.18
SHKBP1-227ENST00000602011 GHRLQ9UBU3 117 aa13.91□□□□□ -0.18
SHKBP1-227ENST00000602011 DIMT1Q9UNQ2 313 aaKnown RBP13.91□□□□□ -0.18
SHKBP1-227ENST00000602011 PEX16Q9Y5Y5 336 aa13.91□□□□□ -0.18
SHKBP1-227ENST00000602011 SMAD5-AS1Q9Y6J3 95 aa13.91□□□□□ -0.18
SHKBP1-227ENST00000602011 HUWE1Q7Z6Z7 4374 aaKnown RBP13.91□□□□□ -0.18
SHKBP1-227ENST00000602011 STAB2Q8WWQ8 2551 aa13.9□□□□□ -0.18
SHKBP1-227ENST00000602011 ZNF736B4DX44 427 aaPredicted RBP13.9□□□□□ -0.18
SHKBP1-227ENST00000602011 HLA-DRB1P01911 266 aa13.9□□□□□ -0.18
SHKBP1-227ENST00000602011 PPIFP30405 207 aaKnown RBP13.9□□□□□ -0.18
SHKBP1-227ENST00000602011 ETV1P50549 477 aa13.9□□□□□ -0.18
SHKBP1-227ENST00000602011 HTD2P86397 168 aa13.9□□□□□ -0.18
SHKBP1-227ENST00000602011 ZNF616Q08AN1 781 aa13.9□□□□□ -0.18
SHKBP1-227ENST00000602011 LSAMPQ13449 338 aa13.9□□□□□ -0.18
SHKBP1-227ENST00000602011 MMDQ15546 238 aa13.9□□□□□ -0.18
SHKBP1-227ENST00000602011 DEFB136Q30KP8 78 aa13.9□□□□□ -0.18
SHKBP1-227ENST00000602011 MORN2Q502X0 79 aa13.9□□□□□ -0.18
SHKBP1-227ENST00000602011 NKAPLQ5M9Q1 402 aa13.9□□□□□ -0.18
SHKBP1-227ENST00000602011 DMKNQ6E0U4 476 aaPredicted RBP13.9□□□□□ -0.18
SHKBP1-227ENST00000602011 GLIPR1L1Q6UWM5 242 aa13.9□□□□□ -0.18
SHKBP1-227ENST00000602011 APH1BQ8WW43 257 aa13.9□□□□□ -0.18
SHKBP1-227ENST00000602011 PRR25Q96S07 402 aa13.9□□□□□ -0.18
SHKBP1-227ENST00000602011 SLC29A1Q99808 456 aa13.9□□□□□ -0.18
SHKBP1-227ENST00000602011 ASCL2Q99929 193 aa13.9□□□□□ -0.18
SHKBP1-227ENST00000602011 HSPB9Q9BQS6 159 aa13.9□□□□□ -0.18
SHKBP1-227ENST00000602011 ZNF251Q9BRH9 671 aa13.9□□□□□ -0.18
SHKBP1-227ENST00000602011 MBNL3Q9NUK0 354 aaKnown RBP13.9□□□□□ -0.18
SHKBP1-227ENST00000602011 ZNF581Q9P0T4 197 aa13.9□□□□□ -0.18
SHKBP1-227ENST00000602011 JPT1Q9UK76 154 aa13.9□□□□□ -0.18
SHKBP1-227ENST00000602011 MRPS28Q9Y2Q9 187 aaKnown RBP13.9□□□□□ -0.18
SHKBP1-227ENST00000602011 TAS2R43P59537 309 aa13.89□□□□□ -0.19
SHKBP1-227ENST00000602011 XAF1Q6GPH4 301 aa13.89□□□□□ -0.19
SHKBP1-227ENST00000602011 ZNF491Q8N8L2 437 aa13.89□□□□□ -0.19
SHKBP1-227ENST00000602011 OR4K15Q8NH41 348 aa13.89□□□□□ -0.19
SHKBP1-227ENST00000602011 OR51J1Q9H342 316 aa13.89□□□□□ -0.19
SHKBP1-227ENST00000602011 GHITMQ9H3K2 345 aa13.89□□□□□ -0.19
SHKBP1-227ENST00000602011 TAF9BQ9HBM6 251 aa13.89□□□□□ -0.19
SHKBP1-227ENST00000602011 TENM2Q9NT68 2774 aa13.88□□□□□ -0.19
SHKBP1-227ENST00000602011 I3L521 148 aa13.88□□□□□ -0.19
SHKBP1-227ENST00000602011 ARPC1BO15143 372 aaKnown RBP13.88□□□□□ -0.19
SHKBP1-227ENST00000602011 SLC31A2O15432 143 aa13.88□□□□□ -0.19
SHKBP1-227ENST00000602011 YPEL1O60688 119 aa13.88□□□□□ -0.19
SHKBP1-227ENST00000602011 WBP4O75554 376 aaKnown RBP13.88□□□□□ -0.19
SHKBP1-227ENST00000602011 IGLV1-40P01703 118 aa13.88□□□□□ -0.19
SHKBP1-227ENST00000602011 ACTBP60709 375 aa13.88□□□□□ -0.19
SHKBP1-227ENST00000602011 OR2G6Q5TZ20 316 aa13.88□□□□□ -0.19
SHKBP1-227ENST00000602011 LIN54Q6MZP7 749 aa13.88□□□□□ -0.19
SHKBP1-227ENST00000602011 JAGN1Q8N5M9 183 aa13.88□□□□□ -0.19
SHKBP1-227ENST00000602011 TCTEX1D1Q8N7M0 179 aa13.88□□□□□ -0.19
SHKBP1-227ENST00000602011 UBALD1Q8TB05 177 aa13.88□□□□□ -0.19
SHKBP1-227ENST00000602011 TMEM80Q96HE8 168 aa13.88□□□□□ -0.19
SHKBP1-227ENST00000602011 YPEL2Q96QA6 119 aa13.88□□□□□ -0.19
SHKBP1-227ENST00000602011 UQCC2Q9BRT2 126 aa13.88□□□□□ -0.19
SHKBP1-227ENST00000602011 CST11Q9H112 138 aa13.88□□□□□ -0.19
SHKBP1-227ENST00000602011 KIAA1456Q9P272 454 aa13.88□□□□□ -0.19
SHKBP1-227ENST00000602011 SORL1Q92673 2214 aa13.87□□□□□ -0.19
SHKBP1-227ENST00000602011 SACSQ9NZJ4 4579 aa13.87□□□□□ -0.19
SHKBP1-227ENST00000602011 A0A1W2PP11 408 aa13.87□□□□□ -0.19
SHKBP1-227ENST00000602011 CD1AP06126 327 aa13.87□□□□□ -0.19
SHKBP1-227ENST00000602011 CAPGP40121 348 aa13.87□□□□□ -0.19
SHKBP1-227ENST00000602011 RAB9AP51151 201 aa13.87□□□□□ -0.19
SHKBP1-227ENST00000602011 KIAA0141Q14154 515 aaPredicted RBP13.87□□□□□ -0.19
SHKBP1-227ENST00000602011 DOC2BQ14184 412 aa13.87□□□□□ -0.19
SHKBP1-227ENST00000602011 AWAT2Q6E213 333 aa13.87□□□□□ -0.19
SHKBP1-227ENST00000602011 FAM71F2Q6NXP2 309 aa13.87□□□□□ -0.19
SHKBP1-227ENST00000602011 PQLC1Q8N2U9 271 aa13.87□□□□□ -0.19
SHKBP1-227ENST00000602011 PRR18Q8N4B5 295 aa13.87□□□□□ -0.19
SHKBP1-227ENST00000602011 NKAIN3Q8N8D7 197 aa13.87□□□□□ -0.19
SHKBP1-227ENST00000602011 NPBQ8NG41 125 aa13.87□□□□□ -0.19
SHKBP1-227ENST00000602011 OR10V1Q8NGI7 309 aa13.87□□□□□ -0.19
SHKBP1-227ENST00000602011 OR1L1Q8NH94 360 aa13.87□□□□□ -0.19
SHKBP1-227ENST00000602011 MUL1Q969V5 352 aa13.87□□□□□ -0.19
SHKBP1-227ENST00000602011 GALMQ96C23 342 aa13.87□□□□□ -0.19
SHKBP1-227ENST00000602011 ABHD14AQ9BUJ0 271 aa13.87□□□□□ -0.19
SHKBP1-227ENST00000602011 SELENOIQ9C0D9 397 aa13.87□□□□□ -0.19
SHKBP1-227ENST00000602011 S100A14Q9HCY8 104 aa13.87□□□□□ -0.19
SHKBP1-227ENST00000602011 SMPD3Q9NY59 655 aaPredicted RBP13.87□□□□□ -0.19
SHKBP1-227ENST00000602011 DNAH7Q8WXX0 4024 aa13.87□□□□□ -0.19
SHKBP1-227ENST00000602011 TRBV5-7A0A0A0MS05 114 aa13.86□□□□□ -0.19
SHKBP1-227ENST00000602011 TRAV41A0A0B4J266 112 aa13.86□□□□□ -0.19
SHKBP1-227ENST00000602011 NBR2O15453 112 aa13.86□□□□□ -0.19
SHKBP1-227ENST00000602011 MGMTP16455 207 aa13.86□□□□□ -0.19
SHKBP1-227ENST00000602011 RCC1P18754 421 aaPredicted RBP13.86□□□□□ -0.19
SHKBP1-227ENST00000602011 RPS11P62280 158 aaKnown RBP eCLIP13.86□□□□□ -0.19
SHKBP1-227ENST00000602011 TMEM267Q0VDI3 215 aaPredicted RBP13.86□□□□□ -0.19
SHKBP1-227ENST00000602011 C5orf64Q2M2E5 130 aa13.86□□□□□ -0.19
SHKBP1-227ENST00000602011 TTC23Q5W5X9 447 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms