RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 DUX4L9Q6RFH8 374 aaPredicted RBP14.68□□□□□ -0.06
SHKBP1-224ENST00000600718 CLEC18BQ6UXF7 455 aa14.68□□□□□ -0.06
SHKBP1-224ENST00000600718 CCDC71LQ8N9Z2 235 aa14.68□□□□□ -0.06
SHKBP1-224ENST00000600718 ARL11Q969Q4 196 aa14.68□□□□□ -0.06
SHKBP1-224ENST00000600718 C14orf79Q96F83 325 aa14.68□□□□□ -0.06
SHKBP1-224ENST00000600718 AIFM2Q9BRQ8 373 aa14.68□□□□□ -0.06
SHKBP1-224ENST00000600718 SLC5A7Q9GZV3 580 aa14.68□□□□□ -0.06
SHKBP1-224ENST00000600718 UBTD1Q9HAC8 227 aa14.68□□□□□ -0.06
SHKBP1-224ENST00000600718 DUX4Q9UBX2 424 aa14.68□□□□□ -0.06
SHKBP1-224ENST00000600718 SHPKQ9UHJ6 478 aa14.68□□□□□ -0.06
SHKBP1-224ENST00000600718 RNF224P0DH78 156 aa14.67□□□□□ -0.06
SHKBP1-224ENST00000600718 GNRHRP30968 328 aa14.67□□□□□ -0.06
SHKBP1-224ENST00000600718 CEACAM6P40199 344 aa14.67□□□□□ -0.06
SHKBP1-224ENST00000600718 LGALSLQ3ZCW2 172 aaPredicted RBP14.67□□□□□ -0.06
SHKBP1-224ENST00000600718 FAM185AQ8N0U4 392 aa14.67□□□□□ -0.06
SHKBP1-224ENST00000600718 LHFPL5Q8TAF8 219 aa14.67□□□□□ -0.06
SHKBP1-224ENST00000600718 UBALD1Q8TB05 177 aa14.67□□□□□ -0.06
SHKBP1-224ENST00000600718 SECTM1Q8WVN6 248 aa14.67□□□□□ -0.06
SHKBP1-224ENST00000600718 TOLLIPQ9H0E2 274 aa14.67□□□□□ -0.06
SHKBP1-224ENST00000600718 KAAG1Q9UBP8 84 aa14.67□□□□□ -0.06
SHKBP1-224ENST00000600718 LAMP3Q9UQV4 416 aa14.67□□□□□ -0.06
SHKBP1-224ENST00000600718 KCNIP3Q9Y2W7 256 aa14.67□□□□□ -0.06
SHKBP1-224ENST00000600718 ARFGEF3Q5TH69 2177 aa14.67□□□□□ -0.06
SHKBP1-224ENST00000600718 IGKV1D-13A0A0B4J2D9 117 aa14.67□□□□□ -0.06
SHKBP1-224ENST00000600718 TEX13DA0A0J9YY54 714 aaPredicted RBP14.67□□□□□ -0.06
SHKBP1-224ENST00000600718 C15orf65H3BRN8 121 aa14.67□□□□□ -0.06
SHKBP1-224ENST00000600718 IGKV1-13P0DP09 117 aa14.67□□□□□ -0.06
SHKBP1-224ENST00000600718 RAB14P61106 215 aa14.67□□□□□ -0.06
SHKBP1-224ENST00000600718 SLC9A3R2Q15599 337 aa14.67□□□□□ -0.06
SHKBP1-224ENST00000600718 PXDC1Q5TGL8 231 aa14.67□□□□□ -0.06
SHKBP1-224ENST00000600718 COQ8AQ8NI60 647 aa14.67□□□□□ -0.06
SHKBP1-224ENST00000600718 RTN4IP1Q8WWV3 396 aaPredicted RBP14.67□□□□□ -0.06
SHKBP1-224ENST00000600718 DCTN5Q9BTE1 182 aa14.67□□□□□ -0.06
SHKBP1-224ENST00000600718 RAB9BQ9NP90 201 aa14.67□□□□□ -0.06
SHKBP1-224ENST00000600718 SLC2A9Q9NRM0 540 aa14.67□□□□□ -0.06
SHKBP1-224ENST00000600718 RDH8Q9NYR8 311 aa14.67□□□□□ -0.06
SHKBP1-224ENST00000600718 TANC2Q9HCD6 1990 aa14.66□□□□□ -0.06
SHKBP1-224ENST00000600718 GOSR2O14653 212 aa14.66□□□□□ -0.06
SHKBP1-224ENST00000600718 OR2A4O95047 310 aa14.66□□□□□ -0.06
SHKBP1-224ENST00000600718 IFNA2P01563 188 aa14.66□□□□□ -0.06
SHKBP1-224ENST00000600718 HLA-GP17693 338 aa14.66□□□□□ -0.06
SHKBP1-224ENST00000600718 DNASE1P24855 282 aa14.66□□□□□ -0.06
SHKBP1-224ENST00000600718 LUMP51884 338 aaPredicted RBP14.66□□□□□ -0.06
SHKBP1-224ENST00000600718 HTD2P86397 168 aa14.66□□□□□ -0.06
SHKBP1-224ENST00000600718 C2orf68Q2NKX9 166 aa14.66□□□□□ -0.06
SHKBP1-224ENST00000600718 PHLDA2Q53GA4 152 aa14.66□□□□□ -0.06
SHKBP1-224ENST00000600718 NLRC3Q7RTR2 1065 aa14.66□□□□□ -0.06
SHKBP1-224ENST00000600718 OR10V1Q8NGI7 309 aa14.66□□□□□ -0.06
SHKBP1-224ENST00000600718 OR2A7Q96R45 310 aa14.66□□□□□ -0.06
SHKBP1-224ENST00000600718 SLC25A10Q9UBX3 287 aaPredicted RBP14.66□□□□□ -0.06
SHKBP1-224ENST00000600718 LYNX1G3V0Z9 82 aa14.65□□□□□ -0.06
SHKBP1-224ENST00000600718 GPR31O00270 319 aa14.65□□□□□ -0.06
SHKBP1-224ENST00000600718 ADAM20O43506 726 aa14.65□□□□□ -0.06
SHKBP1-224ENST00000600718 RP2O75695 350 aa14.65□□□□□ -0.06
SHKBP1-224ENST00000600718 GIPP09681 153 aaPredicted RBP14.65□□□□□ -0.06
SHKBP1-224ENST00000600718 CGB3P0DN86 165 aa14.65□□□□□ -0.06
SHKBP1-224ENST00000600718 CGB7P0DN87 165 aa14.65□□□□□ -0.06
SHKBP1-224ENST00000600718 LYNX1P0DP58 116 aa14.65□□□□□ -0.06
SHKBP1-224ENST00000600718 SSTR5P35346 364 aa14.65□□□□□ -0.06
SHKBP1-224ENST00000600718 RND3P61587 244 aa14.65□□□□□ -0.06
SHKBP1-224ENST00000600718 ASB13Q8WXK3 278 aa14.65□□□□□ -0.06
SHKBP1-224ENST00000600718 CORO2AQ92828 525 aa14.65□□□□□ -0.06
SHKBP1-224ENST00000600718 NINJ1Q92982 152 aa14.65□□□□□ -0.06
SHKBP1-224ENST00000600718 NAA60Q9H7X0 242 aa14.65□□□□□ -0.06
SHKBP1-224ENST00000600718 TRGV10A0A0A0MS01 117 aa14.65□□□□□ -0.06
SHKBP1-224ENST00000600718 TRIM77I1YAP6 450 aa14.65□□□□□ -0.06
SHKBP1-224ENST00000600718 NDUFB3O43676 98 aa14.65□□□□□ -0.06
SHKBP1-224ENST00000600718 MPC2O95563 127 aa14.65□□□□□ -0.06
SHKBP1-224ENST00000600718 LIN54Q6MZP7 749 aa14.65□□□□□ -0.06
SHKBP1-224ENST00000600718 FAM122CQ6P4D5 195 aa14.65□□□□□ -0.06
SHKBP1-224ENST00000600718 KCTD9Q7L273 389 aa14.65□□□□□ -0.06
SHKBP1-224ENST00000600718 OR52L2PQ8NGH6 319 aa14.65□□□□□ -0.06
SHKBP1-224ENST00000600718 GALNT14Q96FL9 552 aa14.65□□□□□ -0.06
SHKBP1-224ENST00000600718 CCL28Q9NRJ3 127 aa14.65□□□□□ -0.06
SHKBP1-224ENST00000600718 PIPOXQ9P0Z9 390 aa14.65□□□□□ -0.06
SHKBP1-224ENST00000600718 CFAP46Q8IYW2 2715 aa14.65□□□□□ -0.06
SHKBP1-224ENST00000600718 ROS1P08922 2347 aa14.64□□□□□ -0.07
SHKBP1-224ENST00000600718 DBX1A6NMT0 343 aa14.64□□□□□ -0.07
SHKBP1-224ENST00000600718 MPPED1O15442 326 aa14.64□□□□□ -0.07
SHKBP1-224ENST00000600718 NDUFB7P17568 137 aa14.64□□□□□ -0.07
SHKBP1-224ENST00000600718 RAP2BP61225 183 aa14.64□□□□□ -0.07
SHKBP1-224ENST00000600718 MEF2CQ06413 473 aaPredicted RBP14.64□□□□□ -0.07
SHKBP1-224ENST00000600718 LRRC10Q5BKY1 277 aa14.64□□□□□ -0.07
SHKBP1-224ENST00000600718 LYPD2Q6UXB3 125 aa14.64□□□□□ -0.07
SHKBP1-224ENST00000600718 ZNF818PQ6ZRF7 136 aa14.64□□□□□ -0.07
SHKBP1-224ENST00000600718 LDLRAD3Q86YD5 345 aa14.64□□□□□ -0.07
SHKBP1-224ENST00000600718 CMTM1Q8IZ96 169 aa14.64□□□□□ -0.07
SHKBP1-224ENST00000600718 RFESDQ8TAC1 157 aa14.64□□□□□ -0.07
SHKBP1-224ENST00000600718 GSX2Q9BZM3 304 aa14.64□□□□□ -0.07
SHKBP1-224ENST00000600718 CHIAQ9BZP6 476 aa14.64□□□□□ -0.07
SHKBP1-224ENST00000600718 OR2S2Q9NQN1 319 aa14.64□□□□□ -0.07
SHKBP1-224ENST00000600718 HSD17B6O14756 317 aa14.64□□□□□ -0.07
SHKBP1-224ENST00000600718 SNAPC5O75971 98 aa14.64□□□□□ -0.07
SHKBP1-224ENST00000600718 IGHV2-70P01814 119 aa14.64□□□□□ -0.07
SHKBP1-224ENST00000600718 DAOP14920 347 aa14.64□□□□□ -0.07
SHKBP1-224ENST00000600718 S100GP29377 79 aa14.64□□□□□ -0.07
SHKBP1-224ENST00000600718 H2BFSP57053 126 aa14.64□□□□□ -0.07
SHKBP1-224ENST00000600718 TLE4Q04727 773 aa14.64□□□□□ -0.07
SHKBP1-224ENST00000600718 ANKRD55Q3KP44 614 aa14.64□□□□□ -0.07
SHKBP1-224ENST00000600718 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms