RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 AKR1E2Q96JD6 320 aa14□□□□□ -0.17
SHKBP1-203ENST00000594298 KCTD7Q96MP8 289 aa14□□□□□ -0.17
SHKBP1-203ENST00000594298 LIN7BQ9HAP6 207 aa14□□□□□ -0.17
SHKBP1-203ENST00000594298 ZNF286AQ9HBT8 521 aa14□□□□□ -0.17
SHKBP1-203ENST00000594298 RAB22AQ9UL26 194 aa14□□□□□ -0.17
SHKBP1-203ENST00000594298 AMMECR1Q9Y4X0 333 aaPredicted RBP14□□□□□ -0.17
SHKBP1-203ENST00000594298 TRAV39A0A0B4J263 110 aa13.99□□□□□ -0.17
SHKBP1-203ENST00000594298 A0A1W2PRX2 142 aa13.99□□□□□ -0.17
SHKBP1-203ENST00000594298 IGLV1-47P01700 117 aa13.99□□□□□ -0.17
SHKBP1-203ENST00000594298 PF4V1P10720 104 aa13.99□□□□□ -0.17
SHKBP1-203ENST00000594298 SSTR5P35346 364 aa13.99□□□□□ -0.17
SHKBP1-203ENST00000594298 CLDN12P56749 244 aa13.99□□□□□ -0.17
SHKBP1-203ENST00000594298 HLA-DRB5Q30154 266 aa13.99□□□□□ -0.17
SHKBP1-203ENST00000594298 ZNF554Q86TJ5 538 aa13.99□□□□□ -0.17
SHKBP1-203ENST00000594298 FAM89BQ8N5H3 189 aa13.99□□□□□ -0.17
SHKBP1-203ENST00000594298 OR56B1Q8NGI3 324 aa13.99□□□□□ -0.17
SHKBP1-203ENST00000594298 OR4K15Q8NH41 348 aa13.99□□□□□ -0.17
SHKBP1-203ENST00000594298 LPAR5Q9H1C0 372 aa13.99□□□□□ -0.17
SHKBP1-203ENST00000594298 RIMS4Q9H426 269 aaPredicted RBP13.99□□□□□ -0.17
SHKBP1-203ENST00000594298 TSSC4Q9Y5U2 329 aaPredicted RBP13.99□□□□□ -0.17
SHKBP1-203ENST00000594298 NOTCH3Q9UM47 2321 aa13.99□□□□□ -0.17
SHKBP1-203ENST00000594298 SHISA3A0PJX4 238 aa13.98□□□□□ -0.17
SHKBP1-203ENST00000594298 FAM172BPA6NC97 362 aa13.98□□□□□ -0.17
SHKBP1-203ENST00000594298 OOSP1A8MZH6 123 aa13.98□□□□□ -0.17
SHKBP1-203ENST00000594298 DUS4LO95620 317 aaKnown RBP13.98□□□□□ -0.17
SHKBP1-203ENST00000594298 BRS3P32247 399 aa13.98□□□□□ -0.17
SHKBP1-203ENST00000594298 OR10A3P58181 314 aa13.98□□□□□ -0.17
SHKBP1-203ENST00000594298 LTC4SQ16873 150 aa13.98□□□□□ -0.17
SHKBP1-203ENST00000594298 VAX1Q5SQQ9 334 aa13.98□□□□□ -0.17
SHKBP1-203ENST00000594298 BAIAP2L2Q6UXY1 529 aa13.98□□□□□ -0.17
SHKBP1-203ENST00000594298 CENPVQ7Z7K6 275 aaPredicted RBP13.98□□□□□ -0.17
SHKBP1-203ENST00000594298 RCC1LQ96I51 464 aaKnown RBP13.98□□□□□ -0.17
SHKBP1-203ENST00000594298 CHCHD6Q9BRQ6 235 aa13.98□□□□□ -0.17
SHKBP1-203ENST00000594298 NICN1Q9BSH3 213 aa13.98□□□□□ -0.17
SHKBP1-203ENST00000594298 FAAP24Q9BTP7 215 aa13.98□□□□□ -0.17
SHKBP1-203ENST00000594298 OR51E2Q9H255 320 aa13.98□□□□□ -0.17
SHKBP1-203ENST00000594298 KCNK15Q9H427 330 aa13.98□□□□□ -0.17
SHKBP1-203ENST00000594298 HSF4Q9ULV5 492 aa13.98□□□□□ -0.17
SHKBP1-203ENST00000594298 TCRBV4S1A1TA0A5B7 111 aa13.97□□□□□ -0.17
SHKBP1-203ENST00000594298 NOTOA8MTQ0 251 aa13.97□□□□□ -0.17
SHKBP1-203ENST00000594298 C15orf65H3BRN8 121 aa13.97□□□□□ -0.17
SHKBP1-203ENST00000594298 BUB1B-PAK6H3BSN5 160 aa13.97□□□□□ -0.17
SHKBP1-203ENST00000594298 J3QR06 171 aa13.97□□□□□ -0.17
SHKBP1-203ENST00000594298 K7EIL1 84 aa13.97□□□□□ -0.17
SHKBP1-203ENST00000594298 SDCBPO00560 298 aaPredicted RBP13.97□□□□□ -0.17
SHKBP1-203ENST00000594298 Q3ZCU0 254 aa13.97□□□□□ -0.17
SHKBP1-203ENST00000594298 CCDC144NLQ6NUI1 221 aa13.97□□□□□ -0.17
SHKBP1-203ENST00000594298 C6orf201Q7Z4U5 140 aa13.97□□□□□ -0.17
SHKBP1-203ENST00000594298 SULT4A1Q9BR01 284 aa13.97□□□□□ -0.17
SHKBP1-203ENST00000594298 CHMP1AQ9HD42 196 aaPredicted RBP13.97□□□□□ -0.17
SHKBP1-203ENST00000594298 PSG11Q9UQ72 335 aa13.97□□□□□ -0.17
SHKBP1-203ENST00000594298 DSCAML1Q8TD84 2053 aa13.96□□□□□ -0.17
SHKBP1-203ENST00000594298 LOC100506127A0A0U1RQW1 187 aa13.96□□□□□ -0.17
SHKBP1-203ENST00000594298 TMEM272A0A1B0GTI8 110 aa13.96□□□□□ -0.17
SHKBP1-203ENST00000594298 METTL21EPA6NDL7 271 aa13.96□□□□□ -0.17
SHKBP1-203ENST00000594298 C12orf77C9JDV5 145 aa13.96□□□□□ -0.17
SHKBP1-203ENST00000594298 LDLRAD4O15165 306 aa13.96□□□□□ -0.17
SHKBP1-203ENST00000594298 SOCS1O15524 211 aa13.96□□□□□ -0.17
SHKBP1-203ENST00000594298 OR2F2O95006 317 aa13.96□□□□□ -0.17
SHKBP1-203ENST00000594298 PF4P02776 101 aa13.96□□□□□ -0.17
SHKBP1-203ENST00000594298 RAB6AP20340 208 aa13.96□□□□□ -0.17
SHKBP1-203ENST00000594298 GADD45AP24522 165 aa13.96□□□□□ -0.17
SHKBP1-203ENST00000594298 MNDAP41218 407 aa13.96□□□□□ -0.17
SHKBP1-203ENST00000594298 VEGFCP49767 419 aa13.96□□□□□ -0.17
SHKBP1-203ENST00000594298 OR4X2Q8NGF9 303 aa13.96□□□□□ -0.17
SHKBP1-203ENST00000594298 MRPL30Q8TCC3 161 aaKnown RBP13.96□□□□□ -0.17
SHKBP1-203ENST00000594298 CAPSLQ8WWF8 208 aa13.96□□□□□ -0.17
SHKBP1-203ENST00000594298 PTX4Q96A99 478 aa13.96□□□□□ -0.17
SHKBP1-203ENST00000594298 RBM14Q96PK6 669 aaKnown RBP13.96□□□□□ -0.17
SHKBP1-203ENST00000594298 SLC25A33Q9BSK2 321 aa13.96□□□□□ -0.17
SHKBP1-203ENST00000594298 TAF9BQ9HBM6 251 aa13.96□□□□□ -0.17
SHKBP1-203ENST00000594298 MBNL3Q9NUK0 354 aaKnown RBP13.96□□□□□ -0.17
SHKBP1-203ENST00000594298 GFOD1Q9NXC2 390 aa13.96□□□□□ -0.17
SHKBP1-203ENST00000594298 KMT2CQ8NEZ4 4911 aaKnown RBP13.95□□□□□ -0.18
SHKBP1-203ENST00000594298 A0A0A6YYD4 124 aa13.95□□□□□ -0.18
SHKBP1-203ENST00000594298 HBZP02008 142 aa13.95□□□□□ -0.18
SHKBP1-203ENST00000594298 LPLP06858 475 aa13.95□□□□□ -0.18
SHKBP1-203ENST00000594298 RCC1P18754 421 aaPredicted RBP13.95□□□□□ -0.18
SHKBP1-203ENST00000594298 MRPS15P82914 257 aaKnown RBP13.95□□□□□ -0.18
SHKBP1-203ENST00000594298 MADCAM1Q13477 382 aa13.95□□□□□ -0.18
SHKBP1-203ENST00000594298 ABCA11PQ4W5N1 156 aa13.95□□□□□ -0.18
SHKBP1-203ENST00000594298 TPTE2P1Q5T6R2 138 aa13.95□□□□□ -0.18
SHKBP1-203ENST00000594298 MOB1BQ7L9L4 216 aa13.95□□□□□ -0.18
SHKBP1-203ENST00000594298 C8orf31Q8N9H6 132 aa13.95□□□□□ -0.18
SHKBP1-203ENST00000594298 OR10X1Q8NGY0 326 aa13.95□□□□□ -0.18
SHKBP1-203ENST00000594298 RPEQ96AT9 228 aa13.95□□□□□ -0.18
SHKBP1-203ENST00000594298 ABRACLQ9P1F3 81 aa13.95□□□□□ -0.18
SHKBP1-203ENST00000594298 GNG12Q9UBI6 72 aa13.95□□□□□ -0.18
SHKBP1-203ENST00000594298 MGAT4AQ9UM21 535 aa13.95□□□□□ -0.18
SHKBP1-203ENST00000594298 LY6LH3BQJ8 138 aa13.94□□□□□ -0.18
SHKBP1-203ENST00000594298 AMY1AP04745 511 aa13.94□□□□□ -0.18
SHKBP1-203ENST00000594298 AMY2AP04746 511 aa13.94□□□□□ -0.18
SHKBP1-203ENST00000594298 CD24P25063 80 aa13.94□□□□□ -0.18
SHKBP1-203ENST00000594298 IL3RAP26951 378 aa13.94□□□□□ -0.18
SHKBP1-203ENST00000594298 SDC2P34741 201 aa13.94□□□□□ -0.18
SHKBP1-203ENST00000594298 GNG10P50151 68 aa13.94□□□□□ -0.18
SHKBP1-203ENST00000594298 EGFEM1PQ0D2K5 195 aa13.94□□□□□ -0.18
SHKBP1-203ENST00000594298 PRR18Q8N4B5 295 aa13.94□□□□□ -0.18
SHKBP1-203ENST00000594298 LINC00311Q8N616 119 aa13.94□□□□□ -0.18
SHKBP1-203ENST00000594298 LEAP2Q969E1 77 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms