RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 ZNF554Q86TJ5 538 aa14.73□□□□□ -0.05
SHKBP1-202ENST00000593764 OR51D1Q8NGF3 324 aa14.73□□□□□ -0.05
SHKBP1-202ENST00000593764 OR10V1Q8NGI7 309 aa14.73□□□□□ -0.05
SHKBP1-202ENST00000593764 CT45A3Q8NHU0 189 aa14.73□□□□□ -0.05
SHKBP1-202ENST00000593764 YTHDF1Q9BYJ9 559 aaKnown RBP14.73□□□□□ -0.05
SHKBP1-202ENST00000593764 RAB9BQ9NP90 201 aa14.73□□□□□ -0.05
SHKBP1-202ENST00000593764 GNG12Q9UBI6 72 aa14.73□□□□□ -0.05
SHKBP1-202ENST00000593764 LRRC42Q9Y546 428 aa14.73□□□□□ -0.05
SHKBP1-202ENST00000593764 V9GY05 133 aa14.73□□□□□ -0.05
SHKBP1-202ENST00000593764 TRAV1-2A0A0B4J238 106 aa14.72□□□□□ -0.05
SHKBP1-202ENST00000593764 IGHV1-3A0A0C4DH29 117 aa14.72□□□□□ -0.05
SHKBP1-202ENST00000593764 TRDV1A0A1B0GX56 115 aa14.72□□□□□ -0.05
SHKBP1-202ENST00000593764 SH2D7A6NKC9 451 aaPredicted RBP14.72□□□□□ -0.05
SHKBP1-202ENST00000593764 FOXI3A8MTJ6 420 aaPredicted RBP14.72□□□□□ -0.05
SHKBP1-202ENST00000593764 CCRL2O00421 344 aa14.72□□□□□ -0.05
SHKBP1-202ENST00000593764 NAPSAO96009 420 aa14.72□□□□□ -0.05
SHKBP1-202ENST00000593764 GAPDHP04406 335 aaKnown RBP14.72□□□□□ -0.05
SHKBP1-202ENST00000593764 CD28P10747 220 aa14.72□□□□□ -0.05
SHKBP1-202ENST00000593764 VDAC2P45880 294 aaPredicted RBP14.72□□□□□ -0.05
SHKBP1-202ENST00000593764 REG1BP48304 166 aa14.72□□□□□ -0.05
SHKBP1-202ENST00000593764 TMEM50BP56557 158 aa14.72□□□□□ -0.05
SHKBP1-202ENST00000593764 C2orf68Q2NKX9 166 aa14.72□□□□□ -0.05
SHKBP1-202ENST00000593764 C2orf76Q3KRA6 126 aa14.72□□□□□ -0.05
SHKBP1-202ENST00000593764 MORN2Q502X0 79 aa14.72□□□□□ -0.05
SHKBP1-202ENST00000593764 SVOPQ8N4V2 548 aa14.72□□□□□ -0.05
SHKBP1-202ENST00000593764 FAM3DQ96BQ1 224 aa14.72□□□□□ -0.05
SHKBP1-202ENST00000593764 KCNIP1Q9NZI2 227 aa14.72□□□□□ -0.05
SHKBP1-202ENST00000593764 NOTCH1P46531 2555 aa14.71□□□□□ -0.05
SHKBP1-202ENST00000593764 LDLRAD4O15165 306 aa14.71□□□□□ -0.05
SHKBP1-202ENST00000593764 LPLP06858 475 aa14.71□□□□□ -0.05
SHKBP1-202ENST00000593764 PSMD7P51665 324 aa14.71□□□□□ -0.05
SHKBP1-202ENST00000593764 ZNF137PP52743 207 aa14.71□□□□□ -0.05
SHKBP1-202ENST00000593764 EBI3Q14213 229 aa14.71□□□□□ -0.05
SHKBP1-202ENST00000593764 GNMTQ14749 295 aa14.71□□□□□ -0.05
SHKBP1-202ENST00000593764 STEAP3Q658P3 488 aa14.71□□□□□ -0.05
SHKBP1-202ENST00000593764 ZNF880Q6PDB4 577 aa14.71□□□□□ -0.05
SHKBP1-202ENST00000593764 OR52L2PQ8NGH6 319 aa14.71□□□□□ -0.05
SHKBP1-202ENST00000593764 RTN4IP1Q8WWV3 396 aaPredicted RBP14.71□□□□□ -0.05
SHKBP1-202ENST00000593764 URM1Q9BTM9 101 aaKnown RBP14.71□□□□□ -0.05
SHKBP1-202ENST00000593764 OR2S2Q9NQN1 319 aa14.71□□□□□ -0.05
SHKBP1-202ENST00000593764 PLEKHJ1Q9NW61 149 aa14.71□□□□□ -0.05
SHKBP1-202ENST00000593764 M0QZK8 103 aa14.7□□□□□ -0.06
SHKBP1-202ENST00000593764 FBXO24O75426 580 aa14.7□□□□□ -0.06
SHKBP1-202ENST00000593764 IGKV1D-33P01593 117 aa14.7□□□□□ -0.06
SHKBP1-202ENST00000593764 IGKV1-33P01594 117 aa14.7□□□□□ -0.06
SHKBP1-202ENST00000593764 CSF1P09603 554 aa14.7□□□□□ -0.06
SHKBP1-202ENST00000593764 GALP22466 123 aa14.7□□□□□ -0.06
SHKBP1-202ENST00000593764 OR10A3P58181 314 aa14.7□□□□□ -0.06
SHKBP1-202ENST00000593764 HTD2P86397 168 aa14.7□□□□□ -0.06
SHKBP1-202ENST00000593764 PLA2G7Q13093 441 aa14.7□□□□□ -0.06
SHKBP1-202ENST00000593764 HNF4GQ14541 408 aa14.7□□□□□ -0.06
SHKBP1-202ENST00000593764 HMGN3Q15651 99 aa14.7□□□□□ -0.06
SHKBP1-202ENST00000593764 ARSJQ5FYB0 599 aaPredicted RBP14.7□□□□□ -0.06
SHKBP1-202ENST00000593764 HES5Q5TA89 166 aa14.7□□□□□ -0.06
SHKBP1-202ENST00000593764 MOB3BQ86TA1 216 aa14.7□□□□□ -0.06
SHKBP1-202ENST00000593764 FAM110DQ8TAY7 271 aaPredicted RBP14.7□□□□□ -0.06
SHKBP1-202ENST00000593764 STEAP1Q9UHE8 339 aa14.7□□□□□ -0.06
SHKBP1-202ENST00000593764 MOB4Q9Y3A3 225 aa14.7□□□□□ -0.06
SHKBP1-202ENST00000593764 RRP15Q9Y3B9 282 aaKnown RBP14.7□□□□□ -0.06
SHKBP1-202ENST00000593764 IGHV3-72A0A0B4J1Y9 119 aa14.69□□□□□ -0.06
SHKBP1-202ENST00000593764 TMEM11P17152 192 aa14.69□□□□□ -0.06
SHKBP1-202ENST00000593764 PPP1CCP36873 323 aaKnown RBP14.69□□□□□ -0.06
SHKBP1-202ENST00000593764 HES1Q14469 280 aa14.69□□□□□ -0.06
SHKBP1-202ENST00000593764 LYG1Q8N1E2 194 aa14.69□□□□□ -0.06
SHKBP1-202ENST00000593764 HDHD3Q9BSH5 251 aaPredicted RBP14.69□□□□□ -0.06
SHKBP1-202ENST00000593764 AK3Q9UIJ7 227 aa14.69□□□□□ -0.06
SHKBP1-202ENST00000593764 JPT1Q9UK76 154 aa14.69□□□□□ -0.06
SHKBP1-202ENST00000593764 HSF4Q9ULV5 492 aa14.69□□□□□ -0.06
SHKBP1-202ENST00000593764 TRBV6-6A0A0A6YYG2 114 aa14.68□□□□□ -0.06
SHKBP1-202ENST00000593764 TMEM272A0A1B0GTI8 110 aa14.68□□□□□ -0.06
SHKBP1-202ENST00000593764 ADARB2-AS1A8MUL3 147 aa14.68□□□□□ -0.06
SHKBP1-202ENST00000593764 YPEL1O60688 119 aa14.68□□□□□ -0.06
SHKBP1-202ENST00000593764 PEX14O75381 377 aa14.68□□□□□ -0.06
SHKBP1-202ENST00000593764 IL3RAP26951 378 aa14.68□□□□□ -0.06
SHKBP1-202ENST00000593764 PSMB9P28065 219 aa14.68□□□□□ -0.06
SHKBP1-202ENST00000593764 VEGFCP49767 419 aa14.68□□□□□ -0.06
SHKBP1-202ENST00000593764 LY6G6FQ5SQ64 297 aa14.68□□□□□ -0.06
SHKBP1-202ENST00000593764 C22orf42Q6IC83 251 aa14.68□□□□□ -0.06
SHKBP1-202ENST00000593764 NR2C2APQ86WQ0 139 aa14.68□□□□□ -0.06
SHKBP1-202ENST00000593764 IZUMO1Q8IYV9 350 aa14.68□□□□□ -0.06
SHKBP1-202ENST00000593764 Q8N6K4 173 aa14.68□□□□□ -0.06
SHKBP1-202ENST00000593764 C5orf56Q8N8D9 126 aa14.68□□□□□ -0.06
SHKBP1-202ENST00000593764 FCGR1BQ92637 280 aa14.68□□□□□ -0.06
SHKBP1-202ENST00000593764 GALMQ96C23 342 aa14.68□□□□□ -0.06
SHKBP1-202ENST00000593764 RBMXL1Q96E39 390 aaKnown RBP14.68□□□□□ -0.06
SHKBP1-202ENST00000593764 EAF1Q96JC9 268 aaPredicted RBP14.68□□□□□ -0.06
SHKBP1-202ENST00000593764 YPEL2Q96QA6 119 aa14.68□□□□□ -0.06
SHKBP1-202ENST00000593764 CITED2Q99967 270 aaPredicted RBP14.68□□□□□ -0.06
SHKBP1-202ENST00000593764 IFITM5A6NNB3 132 aa14.67□□□□□ -0.06
SHKBP1-202ENST00000593764 ZNF736B4DX44 427 aaPredicted RBP14.67□□□□□ -0.06
SHKBP1-202ENST00000593764 PDCD5O14737 125 aa14.67□□□□□ -0.06
SHKBP1-202ENST00000593764 FGF16O43320 207 aa14.67□□□□□ -0.06
SHKBP1-202ENST00000593764 CD1BP29016 333 aa14.67□□□□□ -0.06
SHKBP1-202ENST00000593764 TCTEX1D4Q5JR98 221 aa14.67□□□□□ -0.06
SHKBP1-202ENST00000593764 PLAC9Q5JTB6 97 aa14.67□□□□□ -0.06
SHKBP1-202ENST00000593764 ZNF773Q6PK81 442 aa14.67□□□□□ -0.06
SHKBP1-202ENST00000593764 ODF3L1Q8IXM7 274 aa14.67□□□□□ -0.06
SHKBP1-202ENST00000593764 OR5AU1Q8NGC0 362 aa14.67□□□□□ -0.06
SHKBP1-202ENST00000593764 ARHGAP5-AS1Q96IT6 56 aa14.67□□□□□ -0.06
SHKBP1-202ENST00000593764 PECRQ9BY49 303 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms