RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 VDAC1P21796 283 aa9.62□□□□□ -0.87
TOP3A-217ENST00000584582 UBE2KP61086 200 aa9.62□□□□□ -0.87
TOP3A-217ENST00000584582 CATR1Q13166 79 aa9.62□□□□□ -0.87
TOP3A-217ENST00000584582 PRAMEF5Q5TYX0 476 aa9.62□□□□□ -0.87
TOP3A-217ENST00000584582 RPRMLQ8N4K4 120 aa9.62□□□□□ -0.87
TOP3A-217ENST00000584582 RNF138Q8WVD3 245 aa9.62□□□□□ -0.87
TOP3A-217ENST00000584582 BCL2L2Q92843 193 aaPredicted RBP9.62□□□□□ -0.87
TOP3A-217ENST00000584582 AIFM2Q9BRQ8 373 aa9.62□□□□□ -0.87
TOP3A-217ENST00000584582 MMP26Q9NRE1 261 aa9.62□□□□□ -0.87
TOP3A-217ENST00000584582 HOXD4P09016 255 aaPredicted RBP9.61□□□□□ -0.87
TOP3A-217ENST00000584582 F2RP25116 425 aa9.61□□□□□ -0.87
TOP3A-217ENST00000584582 GPR12P47775 334 aa9.61□□□□□ -0.87
TOP3A-217ENST00000584582 HLA-DRB3P79483 266 aa9.61□□□□□ -0.87
TOP3A-217ENST00000584582 DHODHQ02127 395 aa9.61□□□□□ -0.87
TOP3A-217ENST00000584582 MPV17LQ2QL34 196 aa9.61□□□□□ -0.87
TOP3A-217ENST00000584582 FAM185AQ8N0U4 392 aa9.61□□□□□ -0.87
TOP3A-217ENST00000584582 TMEM252Q8N6L7 170 aa9.61□□□□□ -0.87
TOP3A-217ENST00000584582 ZNRF1Q8ND25 227 aa9.61□□□□□ -0.87
TOP3A-217ENST00000584582 PLPPR1Q8TBJ4 325 aa9.61□□□□□ -0.87
TOP3A-217ENST00000584582 TMEM222Q9H0R3 208 aa9.61□□□□□ -0.87
TOP3A-217ENST00000584582 NOTCH3Q9UM47 2321 aa9.61□□□□□ -0.87
TOP3A-217ENST00000584582 TMEM30CPA0ZSE6 113 aa9.61□□□□□ -0.87
TOP3A-217ENST00000584582 PQLC2LA1A4F0 135 aa9.61□□□□□ -0.87
TOP3A-217ENST00000584582 HIST1H3AP68431 136 aa9.61□□□□□ -0.87
TOP3A-217ENST00000584582 HIST2H3PS2Q5TEC6 136 aa9.61□□□□□ -0.87
TOP3A-217ENST00000584582 HIST2H3AQ71DI3 136 aa9.61□□□□□ -0.87
TOP3A-217ENST00000584582 VKORC1L1Q8N0U8 176 aa9.61□□□□□ -0.87
TOP3A-217ENST00000584582 LOXL4Q96JB6 756 aa9.61□□□□□ -0.87
TOP3A-217ENST00000584582 DYNLRB1Q9NP97 96 aa9.61□□□□□ -0.87
TOP3A-217ENST00000584582 MYOZ1Q9NP98 299 aaPredicted RBP9.61□□□□□ -0.87
TOP3A-217ENST00000584582 CLN8Q9UBY8 286 aa9.61□□□□□ -0.87
TOP3A-217ENST00000584582 TRAV24A0A0B4J272 114 aa9.61□□□□□ -0.87
TOP3A-217ENST00000584582 CECR9P0C854 216 aa9.61□□□□□ -0.87
TOP3A-217ENST00000584582 FAM27E3Q08E93 113 aa9.61□□□□□ -0.87
TOP3A-217ENST00000584582 PDZD11Q5EBL8 140 aa9.61□□□□□ -0.87
TOP3A-217ENST00000584582 CST9LP1Q5W188 147 aa9.61□□□□□ -0.87
TOP3A-217ENST00000584582 FAM24BQ8N5W8 94 aa9.61□□□□□ -0.87
TOP3A-217ENST00000584582 SLC39A9Q9NUM3 307 aa9.61□□□□□ -0.87
TOP3A-217ENST00000584582 YLPM1P49750 1951 aaKnown RBP9.61□□□□□ -0.87
TOP3A-217ENST00000584582 SMPD2O60906 423 aa9.6□□□□□ -0.87
TOP3A-217ENST00000584582 EIF2S3P41091 472 aaKnown RBP9.6□□□□□ -0.87
TOP3A-217ENST00000584582 COL10A1Q03692 680 aa9.6□□□□□ -0.87
TOP3A-217ENST00000584582 SMIM21Q3B7S5 101 aa9.6□□□□□ -0.87
TOP3A-217ENST00000584582 NECAP1Q8NC96 275 aa9.6□□□□□ -0.87
TOP3A-217ENST00000584582 PPP1R35Q8TAP8 253 aa9.6□□□□□ -0.87
TOP3A-217ENST00000584582 CCL17Q92583 94 aa9.6□□□□□ -0.87
TOP3A-217ENST00000584582 TMEM45BQ96B21 275 aa9.6□□□□□ -0.87
TOP3A-217ENST00000584582 AQP10Q96PS8 301 aa9.6□□□□□ -0.87
TOP3A-217ENST00000584582 REG4Q9BYZ8 158 aa9.6□□□□□ -0.87
TOP3A-217ENST00000584582 OPA3Q9H6K4 179 aa9.6□□□□□ -0.87
TOP3A-217ENST00000584582 ENY2Q9NPA8 101 aa9.6□□□□□ -0.87
TOP3A-217ENST00000584582 ARPC4-TTLL3A0A0A6YYG9 625 aa9.6□□□□□ -0.87
TOP3A-217ENST00000584582 TRGV8A0A0C4DH27 118 aa9.6□□□□□ -0.87
TOP3A-217ENST00000584582 MKRN2OSH3BPM6 223 aa9.6□□□□□ -0.87
TOP3A-217ENST00000584582 PRRG2O14669 202 aa9.6□□□□□ -0.87
TOP3A-217ENST00000584582 TAGLN2P37802 199 aaKnown RBP9.6□□□□□ -0.87
TOP3A-217ENST00000584582 ERVK-16P61578 105 aa9.6□□□□□ -0.87
TOP3A-217ENST00000584582 BHLHA15Q7RTS1 189 aaPredicted RBP9.6□□□□□ -0.87
TOP3A-217ENST00000584582 RARRES2Q99969 163 aa9.6□□□□□ -0.87
TOP3A-217ENST00000584582 RIMS4Q9H426 269 aaPredicted RBP9.6□□□□□ -0.87
TOP3A-217ENST00000584582 PRB3Q04118 309 aaPredicted RBP9.6□□□□□ -0.87
TOP3A-217ENST00000584582 MSMO1Q15800 293 aa9.6□□□□□ -0.87
TOP3A-217ENST00000584582 LRP11Q86VZ4 500 aa9.6□□□□□ -0.87
TOP3A-217ENST00000584582 GPR146Q96CH1 333 aa9.6□□□□□ -0.87
TOP3A-217ENST00000584582 RPUSD4Q96CM3 377 aaKnown RBP9.6□□□□□ -0.87
TOP3A-217ENST00000584582 ZNF891A8MT65 544 aaPredicted RBP9.59□□□□□ -0.87
TOP3A-217ENST00000584582 C1orf196B1AJZ1 125 aa9.59□□□□□ -0.87
TOP3A-217ENST00000584582 CDK2AP1O14519 115 aa9.59□□□□□ -0.87
TOP3A-217ENST00000584582 HNF1AP20823 631 aa9.59□□□□□ -0.87
TOP3A-217ENST00000584582 ALDH3B1P43353 468 aa9.59□□□□□ -0.87
TOP3A-217ENST00000584582 KIAA0141Q14154 515 aaPredicted RBP9.59□□□□□ -0.87
TOP3A-217ENST00000584582 ZNF273Q14593 569 aa9.59□□□□□ -0.87
TOP3A-217ENST00000584582 GFRALQ6UXV0 394 aa9.59□□□□□ -0.87
TOP3A-217ENST00000584582 SELENOHQ8IZQ5 122 aaKnown RBP9.59□□□□□ -0.87
TOP3A-217ENST00000584582 NTNG2Q96CW9 530 aa9.59□□□□□ -0.87
TOP3A-217ENST00000584582 LINC00470Q9BZP3 86 aa9.59□□□□□ -0.87
TOP3A-217ENST00000584582 LOC105371267A0A1B0GV96 52 aa9.59□□□□□ -0.87
TOP3A-217ENST00000584582 IGSF23A1L1A6 192 aa9.59□□□□□ -0.87
TOP3A-217ENST00000584582 A8MXK9 166 aa9.59□□□□□ -0.87
TOP3A-217ENST00000584582 HBZP02008 142 aa9.59□□□□□ -0.87
TOP3A-217ENST00000584582 SNRPCP09234 159 aaKnown RBP9.59□□□□□ -0.87
TOP3A-217ENST00000584582 UBE2G2P60604 165 aa9.59□□□□□ -0.87
TOP3A-217ENST00000584582 HBG1P69891 147 aa9.59□□□□□ -0.87
TOP3A-217ENST00000584582 HBG2P69892 147 aa9.59□□□□□ -0.87
TOP3A-217ENST00000584582 C4orf17Q53FE4 359 aa9.59□□□□□ -0.87
TOP3A-217ENST00000584582 LDLRAD3Q86YD5 345 aa9.59□□□□□ -0.87
TOP3A-217ENST00000584582 LYG1Q8N1E2 194 aa9.59□□□□□ -0.87
TOP3A-217ENST00000584582 CLRN3Q8NCR9 226 aa9.59□□□□□ -0.87
TOP3A-217ENST00000584582 OR4A16Q8NH70 328 aa9.59□□□□□ -0.87
TOP3A-217ENST00000584582 GTF3AQ92664 365 aaKnown RBP9.59□□□□□ -0.87
TOP3A-217ENST00000584582 NRIP2Q9BQI9 281 aa9.59□□□□□ -0.87
TOP3A-217ENST00000584582 NUDT16L1Q9BRJ7 211 aaKnown RBP9.59□□□□□ -0.87
TOP3A-217ENST00000584582 SLC25A22Q9H936 323 aa9.59□□□□□ -0.87
TOP3A-217ENST00000584582 RNF122Q9H9V4 155 aa9.59□□□□□ -0.87
TOP3A-217ENST00000584582 LIN7CQ9NUP9 197 aaKnown RBP9.59□□□□□ -0.87
TOP3A-217ENST00000584582 SELLP14151 372 aa9.59□□□□□ -0.87
TOP3A-217ENST00000584582 DHRS11Q6UWP2 260 aa9.59□□□□□ -0.87
TOP3A-217ENST00000584582 S100PBPQ96BU1 408 aa9.59□□□□□ -0.87
TOP3A-217ENST00000584582 OR2V2Q96R30 315 aa9.59□□□□□ -0.87
TOP3A-217ENST00000584582 RSRP1Q9BUV0 290 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms