RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 FAM90A10PA6NDY2 464 aa10.85□□□□□ -0.67
RAB40B-204ENST00000571554 FAM90A7PA6NKC0 464 aa10.85□□□□□ -0.67
RAB40B-204ENST00000571554 NUDT19A8MXV4 375 aa10.85□□□□□ -0.67
RAB40B-204ENST00000571554 FAM90A23PA8MXZ1 464 aa10.85□□□□□ -0.67
RAB40B-204ENST00000571554 SC5DO75845 299 aa10.85□□□□□ -0.67
RAB40B-204ENST00000571554 RPL23AP62750 156 aaKnown RBP10.85□□□□□ -0.67
RAB40B-204ENST00000571554 RPS25P62851 125 aaKnown RBP10.85□□□□□ -0.67
RAB40B-204ENST00000571554 EBI3Q14213 229 aa10.85□□□□□ -0.67
RAB40B-204ENST00000571554 HSD17B12Q53GQ0 312 aa10.85□□□□□ -0.67
RAB40B-204ENST00000571554 GLT8D1Q68CQ7 371 aa10.85□□□□□ -0.67
RAB40B-204ENST00000571554 ETV3LQ6ZN32 361 aa10.85□□□□□ -0.67
RAB40B-204ENST00000571554 LCNL1Q6ZST4 164 aa10.85□□□□□ -0.67
RAB40B-204ENST00000571554 C8orf86Q6ZUL3 223 aa10.85□□□□□ -0.67
RAB40B-204ENST00000571554 C6orf201Q7Z4U5 140 aa10.85□□□□□ -0.67
RAB40B-204ENST00000571554 STPG2Q8N412 459 aa10.85□□□□□ -0.67
RAB40B-204ENST00000571554 MS4A15Q8N5U1 240 aa10.85□□□□□ -0.67
RAB40B-204ENST00000571554 Q8N6K4 173 aa10.85□□□□□ -0.67
RAB40B-204ENST00000571554 C8orf31Q8N9H6 132 aa10.85□□□□□ -0.67
RAB40B-204ENST00000571554 Q8N9W7 124 aa10.85□□□□□ -0.67
RAB40B-204ENST00000571554 WFDC9Q8NEX5 89 aa10.85□□□□□ -0.67
RAB40B-204ENST00000571554 CHPT1Q8WUD6 406 aa10.85□□□□□ -0.67
RAB40B-204ENST00000571554 THRSPQ92748 146 aa10.85□□□□□ -0.67
RAB40B-204ENST00000571554 DUX3Q96PT4 197 aa10.85□□□□□ -0.67
RAB40B-204ENST00000571554 FAAP24Q9BTP7 215 aa10.85□□□□□ -0.67
RAB40B-204ENST00000571554 KCNIP1Q9NZI2 227 aa10.85□□□□□ -0.67
RAB40B-204ENST00000571554 MOSP00540 346 aa10.84□□□□□ -0.67
RAB40B-204ENST00000571554 IGHG2P01859 326 aa10.84□□□□□ -0.67
RAB40B-204ENST00000571554 SRMP19623 302 aa10.84□□□□□ -0.67
RAB40B-204ENST00000571554 MYF6P23409 242 aa10.84□□□□□ -0.67
RAB40B-204ENST00000571554 CHATP28329 748 aa10.84□□□□□ -0.67
RAB40B-204ENST00000571554 HTR2CP28335 458 aa10.84□□□□□ -0.67
RAB40B-204ENST00000571554 GPR12P47775 334 aa10.84□□□□□ -0.67
RAB40B-204ENST00000571554 F2RL1P55085 397 aa10.84□□□□□ -0.67
RAB40B-204ENST00000571554 SLC35A2P78381 396 aa10.84□□□□□ -0.67
RAB40B-204ENST00000571554 UNC119Q13432 240 aa10.84□□□□□ -0.67
RAB40B-204ENST00000571554 IRF3Q14653 427 aa10.84□□□□□ -0.67
RAB40B-204ENST00000571554 P2RY14Q15391 338 aa10.84□□□□□ -0.67
RAB40B-204ENST00000571554 MORN2Q502X0 79 aa10.84□□□□□ -0.67
RAB40B-204ENST00000571554 RNLSQ5VYX0 342 aa10.84□□□□□ -0.67
RAB40B-204ENST00000571554 TRAT1Q6PIZ9 186 aa10.84□□□□□ -0.67
RAB40B-204ENST00000571554 OR2W3Q7Z3T1 314 aa10.84□□□□□ -0.67
RAB40B-204ENST00000571554 FOXRED2Q8IWF2 684 aa10.84□□□□□ -0.67
RAB40B-204ENST00000571554 KLHL30-AS1Q8NEE0 82 aa10.84□□□□□ -0.67
RAB40B-204ENST00000571554 SETD6Q8TBK2 473 aa10.84□□□□□ -0.67
RAB40B-204ENST00000571554 UFD1Q92890 307 aa10.84□□□□□ -0.67
RAB40B-204ENST00000571554 NEDD4LQ96PU5 975 aa10.84□□□□□ -0.67
RAB40B-204ENST00000571554 HSPB9Q9BQS6 159 aa10.84□□□□□ -0.67
RAB40B-204ENST00000571554 TMEM59Q9BXS4 323 aa10.84□□□□□ -0.67
RAB40B-204ENST00000571554 CCDC90BQ9GZT6 254 aa10.84□□□□□ -0.67
RAB40B-204ENST00000571554 PLSCR3Q9NRY6 295 aa10.84□□□□□ -0.67
RAB40B-204ENST00000571554 MBNL3Q9NUK0 354 aaKnown RBP10.84□□□□□ -0.67
RAB40B-204ENST00000571554 GHRLQ9UBU3 117 aa10.84□□□□□ -0.67
RAB40B-204ENST00000571554 A0A0A6YYD4 124 aa10.83□□□□□ -0.68
RAB40B-204ENST00000571554 CA11O75493 328 aa10.83□□□□□ -0.68
RAB40B-204ENST00000571554 UBBP0CG47 229 aa10.83□□□□□ -0.68
RAB40B-204ENST00000571554 SLC2A2P11168 524 aaPredicted RBP10.83□□□□□ -0.68
RAB40B-204ENST00000571554 CD1BP29016 333 aa10.83□□□□□ -0.68
RAB40B-204ENST00000571554 HOXD3P31249 432 aaPredicted RBP10.83□□□□□ -0.68
RAB40B-204ENST00000571554 MAP2K4P45985 399 aa10.83□□□□□ -0.68
RAB40B-204ENST00000571554 OR3A3P47888 321 aa10.83□□□□□ -0.68
RAB40B-204ENST00000571554 RPS27AP62979 156 aaKnown RBP10.83□□□□□ -0.68
RAB40B-204ENST00000571554 SLC35B1P78383 322 aa10.83□□□□□ -0.68
RAB40B-204ENST00000571554 Q3ZCU0 254 aa10.83□□□□□ -0.68
RAB40B-204ENST00000571554 C1orf100Q5SVJ3 147 aa10.83□□□□□ -0.68
RAB40B-204ENST00000571554 REC114Q7Z4M0 266 aa10.83□□□□□ -0.68
RAB40B-204ENST00000571554 MRPL41Q8IXM3 137 aaKnown RBP10.83□□□□□ -0.68
RAB40B-204ENST00000571554 LINC00482Q8N8I6 264 aa10.83□□□□□ -0.68
RAB40B-204ENST00000571554 IL1F10Q8WWZ1 152 aa10.83□□□□□ -0.68
RAB40B-204ENST00000571554 PHYHIPQ92561 330 aa10.83□□□□□ -0.68
RAB40B-204ENST00000571554 S1PR3Q99500 378 aa10.83□□□□□ -0.68
RAB40B-204ENST00000571554 GFI1Q99684 422 aa10.83□□□□□ -0.68
RAB40B-204ENST00000571554 RASL11BQ9BPW5 248 aa10.83□□□□□ -0.68
RAB40B-204ENST00000571554 ABHD14AQ9BUJ0 271 aa10.83□□□□□ -0.68
RAB40B-204ENST00000571554 MRPL20Q9BYC9 149 aaKnown RBP10.83□□□□□ -0.68
RAB40B-204ENST00000571554 ABCG5Q9H222 651 aa10.83□□□□□ -0.68
RAB40B-204ENST00000571554 CHMP1AQ9HD42 196 aaPredicted RBP10.83□□□□□ -0.68
RAB40B-204ENST00000571554 RAB9BQ9NP90 201 aa10.83□□□□□ -0.68
RAB40B-204ENST00000571554 LIN7CQ9NUP9 197 aaKnown RBP10.83□□□□□ -0.68
RAB40B-204ENST00000571554 AK6Q9Y3D8 172 aaKnown RBP10.83□□□□□ -0.68
RAB40B-204ENST00000571554 AP4M1O00189 453 aa10.82□□□□□ -0.68
RAB40B-204ENST00000571554 SLC22A1O15245 554 aa10.82□□□□□ -0.68
RAB40B-204ENST00000571554 RGS10O43665 173 aa10.82□□□□□ -0.68
RAB40B-204ENST00000571554 RPLP1P05386 114 aaKnown RBP10.82□□□□□ -0.68
RAB40B-204ENST00000571554 GLAP06280 429 aa10.82□□□□□ -0.68
RAB40B-204ENST00000571554 UCHL1P09936 223 aa10.82□□□□□ -0.68
RAB40B-204ENST00000571554 CNTFRP26992 372 aa10.82□□□□□ -0.68
RAB40B-204ENST00000571554 BLVRBP30043 206 aaPredicted RBP10.82□□□□□ -0.68
RAB40B-204ENST00000571554 ZNF137PP52743 207 aa10.82□□□□□ -0.68
RAB40B-204ENST00000571554 KRTAP10-11P60412 298 aa10.82□□□□□ -0.68
RAB40B-204ENST00000571554 LSAMPQ13449 338 aa10.82□□□□□ -0.68
RAB40B-204ENST00000571554 TMEM30BQ3MIR4 351 aa10.82□□□□□ -0.68
RAB40B-204ENST00000571554 TMEM91Q6ZNR0 172 aa10.82□□□□□ -0.68
RAB40B-204ENST00000571554 ODF3L1Q8IXM7 274 aa10.82□□□□□ -0.68
RAB40B-204ENST00000571554 RITA1Q96K30 269 aa10.82□□□□□ -0.68
RAB40B-204ENST00000571554 HDHD3Q9BSH5 251 aaPredicted RBP10.82□□□□□ -0.68
RAB40B-204ENST00000571554 JPT1Q9UK76 154 aa10.82□□□□□ -0.68
RAB40B-204ENST00000571554 TPRKBQ9Y3C4 175 aa10.82□□□□□ -0.68
RAB40B-204ENST00000571554 ERICH4A6NGS2 130 aa10.81□□□□□ -0.68
RAB40B-204ENST00000571554 TMEM14DPA8MWL7 114 aa10.81□□□□□ -0.68
RAB40B-204ENST00000571554 ST8SIA5O15466 376 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms