RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 PRDX2P32119 198 aa16.01■□□□□ 0.15
SMPD3-203ENST00000563226 POLR2GP62487 172 aaKnown RBP eCLIP16.01■□□□□ 0.15
SMPD3-203ENST00000563226 CXorf66Q5JRM2 361 aaPredicted RBP16.01■□□□□ 0.15
SMPD3-203ENST00000563226 HSD17B13Q7Z5P4 300 aaPredicted RBP16.01■□□□□ 0.15
SMPD3-203ENST00000563226 OR13A1Q8NGR1 328 aa16.01■□□□□ 0.15
SMPD3-203ENST00000563226 C11orf1Q9H5F2 150 aa16.01■□□□□ 0.15
SMPD3-203ENST00000563226 OOEPA6NGQ2 149 aa16■□□□□ 0.15
SMPD3-203ENST00000563226 C16orf97H3BN30 126 aa16■□□□□ 0.15
SMPD3-203ENST00000563226 NXPH3O95157 252 aa16■□□□□ 0.15
SMPD3-203ENST00000563226 VDAC1P21796 283 aa16■□□□□ 0.15
SMPD3-203ENST00000563226 SSTR5P35346 364 aa16■□□□□ 0.15
SMPD3-203ENST00000563226 WFDC8Q8IUA0 241 aa16■□□□□ 0.15
SMPD3-203ENST00000563226 OR10Z1Q8NGY1 313 aa16■□□□□ 0.15
SMPD3-203ENST00000563226 MAGT1Q9H0U3 335 aa16■□□□□ 0.15
SMPD3-203ENST00000563226 DUXBA0A1W2PPF3 345 aa15.99■□□□□ 0.15
SMPD3-203ENST00000563226 SHOXO15266 292 aa15.99■□□□□ 0.15
SMPD3-203ENST00000563226 ZNF737O75373 536 aa15.99■□□□□ 0.15
SMPD3-203ENST00000563226 SCO1O75880 301 aa15.99■□□□□ 0.15
SMPD3-203ENST00000563226 IGKV1-39P01597 117 aa15.99■□□□□ 0.15
SMPD3-203ENST00000563226 IGKV1D-39P04432 117 aa15.99■□□□□ 0.15
SMPD3-203ENST00000563226 FAM157CP0CG43 387 aa15.99■□□□□ 0.15
SMPD3-203ENST00000563226 S100GP29377 79 aa15.99■□□□□ 0.15
SMPD3-203ENST00000563226 NKX2-1P43699 371 aaPredicted RBP15.99■□□□□ 0.15
SMPD3-203ENST00000563226 TMPRSS3P57727 454 aa15.99■□□□□ 0.15
SMPD3-203ENST00000563226 EDDM3AQ14507 147 aa15.99■□□□□ 0.15
SMPD3-203ENST00000563226 FAM201AQ5SY85 155 aa15.99■□□□□ 0.15
SMPD3-203ENST00000563226 DRAM1Q8N682 238 aa15.99■□□□□ 0.15
SMPD3-203ENST00000563226 OR1S2Q8NGQ3 325 aa15.99■□□□□ 0.15
SMPD3-203ENST00000563226 LRRC20Q8TCA0 184 aa15.99■□□□□ 0.15
SMPD3-203ENST00000563226 IL22RA2Q969J5 263 aa15.99■□□□□ 0.15
SMPD3-203ENST00000563226 GALMQ96C23 342 aa15.99■□□□□ 0.15
SMPD3-203ENST00000563226 SPIN2AQ99865 258 aa15.99■□□□□ 0.15
SMPD3-203ENST00000563226 SPIN2BQ9BPZ2 258 aa15.99■□□□□ 0.15
SMPD3-203ENST00000563226 WFDC1Q9HC57 220 aa15.99■□□□□ 0.15
SMPD3-203ENST00000563226 JKAMPQ9P055 326 aa15.99■□□□□ 0.15
SMPD3-203ENST00000563226 CLEC18AA5D8T8 446 aa15.99■□□□□ 0.15
SMPD3-203ENST00000563226 GPR137BO60478 399 aa15.99■□□□□ 0.15
SMPD3-203ENST00000563226 THBDP07204 575 aa15.99■□□□□ 0.15
SMPD3-203ENST00000563226 IL2RGP31785 369 aa15.99■□□□□ 0.15
SMPD3-203ENST00000563226 P2RY1P47900 373 aa15.99■□□□□ 0.15
SMPD3-203ENST00000563226 IZUMO4Q1ZYL8 232 aa15.99■□□□□ 0.15
SMPD3-203ENST00000563226 CLEC18CQ8NCF0 446 aa15.99■□□□□ 0.15
SMPD3-203ENST00000563226 C5orf30Q96GV9 206 aa15.99■□□□□ 0.15
SMPD3-203ENST00000563226 ZFP57Q9NU63 452 aa15.99■□□□□ 0.15
SMPD3-203ENST00000563226 ELOVL5Q9NYP7 299 aa15.99■□□□□ 0.15
SMPD3-203ENST00000563226 RNF150Q9ULK6 438 aa15.99■□□□□ 0.15
SMPD3-203ENST00000563226 DSCAMO60469 2012 aa15.98■□□□□ 0.15
SMPD3-203ENST00000563226 CFHR2P36980 270 aa15.98■□□□□ 0.15
SMPD3-203ENST00000563226 RPS23P62266 143 aaKnown RBP15.98■□□□□ 0.15
SMPD3-203ENST00000563226 ADGRG4Q8IZF6 3080 aa15.98■□□□□ 0.15
SMPD3-203ENST00000563226 EIF4E3Q8N5X7 224 aaKnown RBP15.98■□□□□ 0.15
SMPD3-203ENST00000563226 AKR1E2Q96JD6 320 aa15.98■□□□□ 0.15
SMPD3-203ENST00000563226 PLA2G2EQ9NZK7 142 aa15.98■□□□□ 0.15
SMPD3-203ENST00000563226 DPRXA6NFQ7 191 aa15.98■□□□□ 0.15
SMPD3-203ENST00000563226 SSSCA1O60232 199 aa15.98■□□□□ 0.15
SMPD3-203ENST00000563226 IGHV1-46P01743 117 aa15.98■□□□□ 0.15
SMPD3-203ENST00000563226 SERPINE2P07093 398 aa15.98■□□□□ 0.15
SMPD3-203ENST00000563226 WNT2P09544 360 aa15.98■□□□□ 0.15
SMPD3-203ENST00000563226 ZNF16P17020 682 aaPredicted RBP15.98■□□□□ 0.15
SMPD3-203ENST00000563226 EPHA1P21709 976 aa15.98■□□□□ 0.15
SMPD3-203ENST00000563226 ZP3P21754 424 aa15.98■□□□□ 0.15
SMPD3-203ENST00000563226 PPP1CCP36873 323 aaKnown RBP15.98■□□□□ 0.15
SMPD3-203ENST00000563226 NHLH2Q02577 135 aa15.98■□□□□ 0.15
SMPD3-203ENST00000563226 RFESDQ8TAC1 157 aa15.98■□□□□ 0.15
SMPD3-203ENST00000563226 SESN1Q9Y6P5 492 aa15.98■□□□□ 0.15
SMPD3-203ENST00000563226 IGHV3-43A0A0B4J1X8 118 aa15.97■□□□□ 0.15
SMPD3-203ENST00000563226 ABCD4O14678 606 aa15.97■□□□□ 0.15
SMPD3-203ENST00000563226 ATXN7O15265 892 aaPredicted RBP15.97■□□□□ 0.15
SMPD3-203ENST00000563226 GAPDHP04406 335 aaKnown RBP15.97■□□□□ 0.15
SMPD3-203ENST00000563226 IGHV3-43DP0DP04 118 aa15.97■□□□□ 0.15
SMPD3-203ENST00000563226 ZNF585BQ52M93 769 aa15.97■□□□□ 0.15
SMPD3-203ENST00000563226 RNF141Q8WVD5 230 aa15.97■□□□□ 0.15
SMPD3-203ENST00000563226 GPR146Q96CH1 333 aa15.97■□□□□ 0.15
SMPD3-203ENST00000563226 RAI1Q7Z5J4 1906 aaPredicted RBP15.97■□□□□ 0.15
SMPD3-203ENST00000563226 DIDO1Q9BTC0 2240 aaKnown RBP15.96■□□□□ 0.15
SMPD3-203ENST00000563226 A0A1B0GW55 424 aa15.96■□□□□ 0.15
SMPD3-203ENST00000563226 FAM24AA6NFZ4 105 aa15.96■□□□□ 0.15
SMPD3-203ENST00000563226 FBXO24O75426 580 aa15.96■□□□□ 0.15
SMPD3-203ENST00000563226 LHBP01229 141 aa15.96■□□□□ 0.15
SMPD3-203ENST00000563226 DUX4L2P0CJ85 424 aa15.96■□□□□ 0.15
SMPD3-203ENST00000563226 DUX4L3P0CJ86 424 aa15.96■□□□□ 0.15
SMPD3-203ENST00000563226 DUX4L4P0CJ87 422 aa15.96■□□□□ 0.15
SMPD3-203ENST00000563226 DUX4L5P0CJ88 424 aa15.96■□□□□ 0.15
SMPD3-203ENST00000563226 DUX4L6P0CJ89 424 aa15.96■□□□□ 0.15
SMPD3-203ENST00000563226 DUX4L7P0CJ90 424 aa15.96■□□□□ 0.15
SMPD3-203ENST00000563226 CD80P33681 288 aa15.96■□□□□ 0.15
SMPD3-203ENST00000563226 GPR157Q5UAW9 335 aa15.96■□□□□ 0.15
SMPD3-203ENST00000563226 TMEM108Q6UXF1 575 aa15.96■□□□□ 0.15
SMPD3-203ENST00000563226 OR2D2Q9H210 308 aa15.96■□□□□ 0.15
SMPD3-203ENST00000563226 NARFLQ9H6Q4 476 aa15.96■□□□□ 0.15
SMPD3-203ENST00000563226 DUX4Q9UBX2 424 aa15.96■□□□□ 0.15
SMPD3-203ENST00000563226 IGSF23A1L1A6 192 aa15.96■□□□□ 0.15
SMPD3-203ENST00000563226 TMEM50AO95807 157 aa15.96■□□□□ 0.15
SMPD3-203ENST00000563226 ASCL1P50553 236 aa15.96■□□□□ 0.15
SMPD3-203ENST00000563226 Q6ZRM9 215 aa15.96■□□□□ 0.15
SMPD3-203ENST00000563226 ZNRF1Q8ND25 227 aa15.96■□□□□ 0.15
SMPD3-203ENST00000563226 NUP37Q8NFH4 326 aa15.96■□□□□ 0.15
SMPD3-203ENST00000563226 ARL11Q969Q4 196 aa15.96■□□□□ 0.15
SMPD3-203ENST00000563226 TAS2R3Q9NYW6 316 aa15.96■□□□□ 0.15
SMPD3-203ENST00000563226 SPTBN4Q9H254 2564 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms