RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 DNAAF3Q8N9W5 541 aa2.16□□□□□ -2.06
LINC00557-201ENST00000563184 GPR119Q8TDV5 335 aa2.16□□□□□ -2.06
LINC00557-201ENST00000563184 GTSF1LQ9H1H1 148 aa2.16□□□□□ -2.06
LINC00557-201ENST00000563184 SCML1Q9UN30 329 aa2.16□□□□□ -2.06
LINC00557-201ENST00000563184 MKRN2OSH3BPM6 223 aa2.15□□□□□ -2.07
LINC00557-201ENST00000563184 H3BSA7 217 aa2.15□□□□□ -2.07
LINC00557-201ENST00000563184 SYNGR1O43759 233 aa2.15□□□□□ -2.07
LINC00557-201ENST00000563184 RAB36O95755 333 aa2.15□□□□□ -2.07
LINC00557-201ENST00000563184 RAB8AP61006 207 aa2.15□□□□□ -2.07
LINC00557-201ENST00000563184 GTF2BQ00403 316 aa2.15□□□□□ -2.07
LINC00557-201ENST00000563184 HTR4Q13639 388 aa2.15□□□□□ -2.07
LINC00557-201ENST00000563184 TIMM23BQ5SRD1 257 aa2.15□□□□□ -2.07
LINC00557-201ENST00000563184 DOLPP1Q86YN1 238 aa2.15□□□□□ -2.07
LINC00557-201ENST00000563184 OR4K13Q8NH42 304 aa2.15□□□□□ -2.07
LINC00557-201ENST00000563184 UGT2B28Q9BY64 529 aa2.15□□□□□ -2.07
LINC00557-201ENST00000563184 ASCL3Q9NQ33 180 aa2.15□□□□□ -2.07
LINC00557-201ENST00000563184 SAMHD1Q9Y3Z3 626 aaKnown RBP2.15□□□□□ -2.07
LINC00557-201ENST00000563184 HEY1Q9Y5J3 304 aa2.15□□□□□ -2.07
LINC00557-201ENST00000563184 NUP153P49790 1475 aaKnown RBP2.14□□□□□ -2.07
LINC00557-201ENST00000563184 ADAMTSL1Q8N6G6 1762 aa2.14□□□□□ -2.07
LINC00557-201ENST00000563184 TRGV4A0A0C4DH28 118 aa2.14□□□□□ -2.07
LINC00557-201ENST00000563184 IQCF5A8MTL0 148 aa2.14□□□□□ -2.07
LINC00557-201ENST00000563184 ODF3BA8MYP8 253 aa2.14□□□□□ -2.07
LINC00557-201ENST00000563184 NDUFS6O75380 124 aaKnown RBP2.14□□□□□ -2.07
LINC00557-201ENST00000563184 ZNF189O75820 626 aaPredicted RBP2.14□□□□□ -2.07
LINC00557-201ENST00000563184 ASS1P00966 412 aaKnown RBP2.14□□□□□ -2.07
LINC00557-201ENST00000563184 FBP1P09467 338 aa2.14□□□□□ -2.07
LINC00557-201ENST00000563184 BLVRBP30043 206 aaPredicted RBP2.14□□□□□ -2.07
LINC00557-201ENST00000563184 KDELR2P33947 212 aa2.14□□□□□ -2.07
LINC00557-201ENST00000563184 SULT1A2P50226 295 aa2.14□□□□□ -2.07
LINC00557-201ENST00000563184 STC1P52823 247 aa2.14□□□□□ -2.07
LINC00557-201ENST00000563184 SLAMF1Q13291 335 aa2.14□□□□□ -2.07
LINC00557-201ENST00000563184 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
LINC00557-201ENST00000563184 TRMT12Q53H54 448 aaKnown RBP2.14□□□□□ -2.07
LINC00557-201ENST00000563184 TAMM41Q96BW9 452 aa2.14□□□□□ -2.07
LINC00557-201ENST00000563184 KLF6Q99612 283 aaPredicted RBP2.14□□□□□ -2.07
LINC00557-201ENST00000563184 EBNA1BP2Q99848 306 aaKnown RBP2.14□□□□□ -2.07
LINC00557-201ENST00000563184 C1QTNF6Q9BXI9 259 aa2.14□□□□□ -2.07
LINC00557-201ENST00000563184 C16orf95Q9H693 158 aa2.14□□□□□ -2.07
LINC00557-201ENST00000563184 TMEM216Q9P0N5 145 aa2.14□□□□□ -2.07
LINC00557-201ENST00000563184 ADAMTS7Q9UKP4 1686 aa2.14□□□□□ -2.07
LINC00557-201ENST00000563184 CHD2O14647 1828 aaKnown RBP2.14□□□□□ -2.07
LINC00557-201ENST00000563184 MAP3K19Q56UN5 1328 aa2.14□□□□□ -2.07
LINC00557-201ENST00000563184 ARHGAP32A7KAX9 2087 aa2.13□□□□□ -2.07
LINC00557-201ENST00000563184 ADGRB3O60242 1522 aa2.13□□□□□ -2.07
LINC00557-201ENST00000563184 COL11A1P12107 1806 aaPredicted RBP2.13□□□□□ -2.07
LINC00557-201ENST00000563184 C9J4A7 227 aa2.13□□□□□ -2.07
LINC00557-201ENST00000563184 HSBP1L1C9JCN9 74 aa2.13□□□□□ -2.07
LINC00557-201ENST00000563184 RD3LP0DJH9 198 aa2.13□□□□□ -2.07
LINC00557-201ENST00000563184 IGHV3-30-3P0DP02 117 aa2.13□□□□□ -2.07
LINC00557-201ENST00000563184 DLX6P56179 175 aa2.13□□□□□ -2.07
LINC00557-201ENST00000563184 TTC33Q6PID6 262 aaPredicted RBP2.13□□□□□ -2.07
LINC00557-201ENST00000563184 SYCE1Q8N0S2 351 aa2.13□□□□□ -2.07
LINC00557-201ENST00000563184 TMEM75Q8N9X5 138 aa2.13□□□□□ -2.07
LINC00557-201ENST00000563184 OR5K1Q8NHB7 308 aa2.13□□□□□ -2.07
LINC00557-201ENST00000563184 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.13□□□□□ -2.07
LINC00557-201ENST00000563184 PPWD1Q96BP3 646 aaKnown RBP2.13□□□□□ -2.07
LINC00557-201ENST00000563184 CAPZA3Q96KX2 299 aa2.13□□□□□ -2.07
LINC00557-201ENST00000563184 UPK3BQ9BT76 320 aa2.13□□□□□ -2.07
LINC00557-201ENST00000563184 MED10Q9BTT4 135 aa2.13□□□□□ -2.07
LINC00557-201ENST00000563184 NRBP2Q9NSY0 501 aa2.13□□□□□ -2.07
LINC00557-201ENST00000563184 COL5A3P25940 1745 aaPredicted RBP2.13□□□□□ -2.07
LINC00557-201ENST00000563184 PLXNA3P51805 1871 aa2.13□□□□□ -2.07
LINC00557-201ENST00000563184 CLUHO75153 1309 aa2.13□□□□□ -2.07
LINC00557-201ENST00000563184 F5H5K5 113 aa2.12□□□□□ -2.07
LINC00557-201ENST00000563184 SMLR1H3BR10 107 aa2.12□□□□□ -2.07
LINC00557-201ENST00000563184 OR4A8P0C604 315 aa2.12□□□□□ -2.07
LINC00557-201ENST00000563184 P0DMU3 169 aa2.12□□□□□ -2.07
LINC00557-201ENST00000563184 FAM231AP0DMU4 169 aa2.12□□□□□ -2.07
LINC00557-201ENST00000563184 FAM231CP0DMU5 169 aa2.12□□□□□ -2.07
LINC00557-201ENST00000563184 GABRA4P48169 554 aa2.12□□□□□ -2.07
LINC00557-201ENST00000563184 PSMB3P49720 205 aa2.12□□□□□ -2.07
LINC00557-201ENST00000563184 DEFB103AP81534 67 aa2.12□□□□□ -2.07
LINC00557-201ENST00000563184 MAPK14Q16539 360 aa2.12□□□□□ -2.07
LINC00557-201ENST00000563184 PCOTHQ58A44 107 aa2.12□□□□□ -2.07
LINC00557-201ENST00000563184 ZNF767PQ75MW2 155 aa2.12□□□□□ -2.07
LINC00557-201ENST00000563184 BOD1L2Q8IYS8 172 aa2.12□□□□□ -2.07
LINC00557-201ENST00000563184 OR4C16Q8NGL9 310 aa2.12□□□□□ -2.07
LINC00557-201ENST00000563184 CCDC12Q8WUD4 166 aaPredicted RBP2.12□□□□□ -2.07
LINC00557-201ENST00000563184 MRPS16Q9Y3D3 137 aaKnown RBP2.12□□□□□ -2.07
LINC00557-201ENST00000563184 J3QKU1 62 aa2.11□□□□□ -2.07
LINC00557-201ENST00000563184 CYTH3O43739 400 aa2.11□□□□□ -2.07
LINC00557-201ENST00000563184 SOD1P00441 154 aa2.11□□□□□ -2.07
LINC00557-201ENST00000563184 CPMP14384 443 aa2.11□□□□□ -2.07
LINC00557-201ENST00000563184 ZNF7P17097 686 aaPredicted RBP2.11□□□□□ -2.07
LINC00557-201ENST00000563184 PMS2P3Q13401 168 aa2.11□□□□□ -2.07
LINC00557-201ENST00000563184 PDK2Q15119 407 aa2.11□□□□□ -2.07
LINC00557-201ENST00000563184 TMEM176BQ3YBM2 270 aaPredicted RBP2.11□□□□□ -2.07
LINC00557-201ENST00000563184 MRPL51Q4U2R6 128 aaKnown RBP2.11□□□□□ -2.07
LINC00557-201ENST00000563184 SMDT1Q9H4I9 107 aa2.11□□□□□ -2.07
LINC00557-201ENST00000563184 TMEM106BQ9NUM4 274 aa2.11□□□□□ -2.07
LINC00557-201ENST00000563184 LINC00527Q9UJ94 153 aa2.11□□□□□ -2.07
LINC00557-201ENST00000563184 MINOS1-NBL1R4GNA1 71 aa2.11□□□□□ -2.07
LINC00557-201ENST00000563184 LRPPRCP42704 1394 aaKnown RBP2.1□□□□□ -2.07
LINC00557-201ENST00000563184 M0QYV0 167 aa2.1□□□□□ -2.07
LINC00557-201ENST00000563184 OVOL1O14753 267 aa2.1□□□□□ -2.07
LINC00557-201ENST00000563184 NPPAP01160 153 aa2.1□□□□□ -2.07
LINC00557-201ENST00000563184 NQO1P15559 274 aaKnown RBP2.1□□□□□ -2.07
LINC00557-201ENST00000563184 ORM2P19652 201 aa2.1□□□□□ -2.07
LINC00557-201ENST00000563184 PPP1CCP36873 323 aaKnown RBP2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms