RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 H0YIZ8 118 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 HSD17B6O14756 317 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 PHF1O43189 567 aaPredicted RBP7.89□□□□□ -1.15
LINC00838-201ENST00000562956 IGHV1-46P01743 117 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 S100A9P06702 114 aaKnown RBP7.89□□□□□ -1.15
LINC00838-201ENST00000562956 ADCYAP1P18509 176 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 OR3A1P47881 315 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 NPBWR1P48145 328 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 SELENOVP59797 346 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 IL15RAQ13261 267 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 GGNBP1Q5YKI7 109 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 UNQ6494/PRO21346Q6UXR6 183 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 TBC1D26Q86UD7 250 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 GCSAMQ8N6F7 178 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 ZNF565Q8N9K5 539 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 CCDC71LQ8N9Z2 235 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 ST6GALNAC3Q8NDV1 305 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 RXFP4Q8TDU9 374 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 ZCCHC14Q8WYQ9 949 aaKnown RBP7.89□□□□□ -1.15
LINC00838-201ENST00000562956 MSI2Q96DH6 328 aaKnown RBP7.89□□□□□ -1.15
LINC00838-201ENST00000562956 COQ2Q96H96 371 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 TAF9BQ9HBM6 251 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 KALRNO60229 2985 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 HEATR1Q9H583 2144 aaKnown RBP7.89□□□□□ -1.15
LINC00838-201ENST00000562956 IGKV1D-17A0A075B6S4 117 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 IGHV3OR15-7A0A075B7D8 119 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 C3orf85A0A1B0GTC6 90 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 TMEM30CPA0ZSE6 113 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 PSG2P11465 335 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 FOSL1P15407 271 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 CFHR2P36980 270 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 CASP6P55212 293 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 IAH1Q2TAA2 248 aaPredicted RBP7.89□□□□□ -1.15
LINC00838-201ENST00000562956 LIAT1Q6ZQX7 453 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 LYZL2Q7Z4W2 148 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 SUCNR1Q9BXA5 334 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 MIOXQ9UGB7 285 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 ERRFI1Q9UJM3 462 aaPredicted RBP7.89□□□□□ -1.15
LINC00838-201ENST00000562956 OR2W1Q9Y3N9 320 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 ZNF705EA8MWA4 302 aaPredicted RBP7.89□□□□□ -1.15
LINC00838-201ENST00000562956 NPIPB11E5RHQ5 1161 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 IFNL4K9M1U5 179 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 PRDX2P32119 198 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 RAB32Q13637 225 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 TESK1Q15569 626 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 HMGN3Q15651 99 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 ADIPOQQ15848 244 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 ADAM5Q6NVV9 412 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 TPRX1Q8N7U7 411 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 KDF1Q8NAX2 398 aaPredicted RBP7.89□□□□□ -1.15
LINC00838-201ENST00000562956 C18orf12Q96KH6 178 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 VRK1Q99986 396 aaPredicted RBP7.89□□□□□ -1.15
LINC00838-201ENST00000562956 PARP12Q9H0J9 701 aaKnown RBP7.89□□□□□ -1.15
LINC00838-201ENST00000562956 TREM1Q9NP99 234 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 NBEAQ8NFP9 2946 aa7.88□□□□□ -1.15
LINC00838-201ENST00000562956 CCL21O00585 134 aa7.88□□□□□ -1.15
LINC00838-201ENST00000562956 TNFSF12O43508 249 aa7.88□□□□□ -1.15
LINC00838-201ENST00000562956 LHBP01229 141 aa7.88□□□□□ -1.15
LINC00838-201ENST00000562956 OR4A8P0C604 315 aa7.88□□□□□ -1.15
LINC00838-201ENST00000562956 GLIPR1P48060 266 aa7.88□□□□□ -1.15
LINC00838-201ENST00000562956 TNFAIP6P98066 277 aaPredicted RBP7.88□□□□□ -1.15
LINC00838-201ENST00000562956 LY6DQ14210 128 aa7.88□□□□□ -1.15
LINC00838-201ENST00000562956 C9orf152Q5JTZ5 239 aa7.88□□□□□ -1.15
LINC00838-201ENST00000562956 FAM201AQ5SY85 155 aa7.88□□□□□ -1.15
LINC00838-201ENST00000562956 SLC35E4Q6ICL7 350 aa7.88□□□□□ -1.15
LINC00838-201ENST00000562956 FAM185AQ8N0U4 392 aa7.88□□□□□ -1.15
LINC00838-201ENST00000562956 LILRB2Q8N423 598 aa7.88□□□□□ -1.15
LINC00838-201ENST00000562956 KCNRGQ8N5I3 272 aa7.88□□□□□ -1.15
LINC00838-201ENST00000562956 LRTM2Q8N967 370 aa7.88□□□□□ -1.15
LINC00838-201ENST00000562956 DCUN1D4Q92564 292 aa7.88□□□□□ -1.15
LINC00838-201ENST00000562956 GCM1Q9NP62 436 aa7.88□□□□□ -1.15
LINC00838-201ENST00000562956 OR5AC2Q9NZP5 309 aa7.88□□□□□ -1.15
LINC00838-201ENST00000562956 DNAJB11Q9UBS4 358 aa7.88□□□□□ -1.15
LINC00838-201ENST00000562956 MEX3AA1L020 520 aaKnown RBP7.88□□□□□ -1.15
LINC00838-201ENST00000562956 OR2F2O95006 317 aa7.88□□□□□ -1.15
LINC00838-201ENST00000562956 LY86O95711 162 aa7.88□□□□□ -1.15
LINC00838-201ENST00000562956 IFNA21P01568 189 aa7.88□□□□□ -1.15
LINC00838-201ENST00000562956 GATA4P43694 442 aa7.88□□□□□ -1.15
LINC00838-201ENST00000562956 GABRA2P47869 451 aa7.88□□□□□ -1.15
LINC00838-201ENST00000562956 RND3P61587 244 aa7.88□□□□□ -1.15
LINC00838-201ENST00000562956 OR2F1Q13607 317 aa7.88□□□□□ -1.15
LINC00838-201ENST00000562956 ZNF345Q14585 488 aa7.88□□□□□ -1.15
LINC00838-201ENST00000562956 KRBOX4Q5JUW0 171 aa7.88□□□□□ -1.15
LINC00838-201ENST00000562956 AVPI1Q5T686 147 aa7.88□□□□□ -1.15
LINC00838-201ENST00000562956 FAM53AQ6NSI3 398 aaPredicted RBP7.88□□□□□ -1.15
LINC00838-201ENST00000562956 MEX3BQ6ZN04 569 aaKnown RBP7.88□□□□□ -1.15
LINC00838-201ENST00000562956 ACOT7LQ6ZUV0 252 aa7.88□□□□□ -1.15
LINC00838-201ENST00000562956 SPAG16Q8N0X2 631 aa7.88□□□□□ -1.15
LINC00838-201ENST00000562956 OR1L1Q8NH94 360 aa7.88□□□□□ -1.15
LINC00838-201ENST00000562956 RRNAD1Q96FB5 475 aaKnown RBP7.88□□□□□ -1.15
LINC00838-201ENST00000562956 TMEM222Q9H0R3 208 aa7.88□□□□□ -1.15
LINC00838-201ENST00000562956 PRORYQ9H606 182 aa7.88□□□□□ -1.15
LINC00838-201ENST00000562956 IL19Q9UHD0 177 aa7.88□□□□□ -1.15
LINC00838-201ENST00000562956 SPTA1P02549 2419 aa7.87□□□□□ -1.15
LINC00838-201ENST00000562956 ATRXP46100 2492 aa7.87□□□□□ -1.15
LINC00838-201ENST00000562956 A0A0D9SG52 128 aa7.87□□□□□ -1.15
LINC00838-201ENST00000562956 C12orf77C9JDV5 145 aa7.87□□□□□ -1.15
LINC00838-201ENST00000562956 HSPA12AO43301 675 aa7.87□□□□□ -1.15
LINC00838-201ENST00000562956 ZNF737O75373 536 aa7.87□□□□□ -1.15
LINC00838-201ENST00000562956 IGLV2-14P01704 120 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms