RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 MMP9P14780 707 aa11.02□□□□□ -0.64
SYNM-203ENST00000560674 FAM209AQ5JX71 171 aa11.02□□□□□ -0.64
SYNM-203ENST00000560674 GBGT1Q8N5D6 347 aa11.02□□□□□ -0.64
SYNM-203ENST00000560674 RFLNBQ8N5W9 214 aa11.02□□□□□ -0.64
SYNM-203ENST00000560674 TMEM204Q9BSN7 226 aa11.02□□□□□ -0.64
SYNM-203ENST00000560674 HEXA-AS1Q9H8Q6 139 aa11.02□□□□□ -0.64
SYNM-203ENST00000560674 C21orf140B9A014 251 aa11.02□□□□□ -0.65
SYNM-203ENST00000560674 CYB5R3P00387 301 aaPredicted RBP11.02□□□□□ -0.65
SYNM-203ENST00000560674 CD1BP29016 333 aa11.02□□□□□ -0.65
SYNM-203ENST00000560674 SGMS2Q8NHU3 365 aa11.02□□□□□ -0.65
SYNM-203ENST00000560674 PRSS27Q9BQR3 290 aa11.02□□□□□ -0.65
SYNM-203ENST00000560674 OR5AC2Q9NZP5 309 aa11.02□□□□□ -0.65
SYNM-203ENST00000560674 KCNK7Q9Y2U2 307 aa11.02□□□□□ -0.65
SYNM-203ENST00000560674 FOCADQ5VW36 1801 aa11.02□□□□□ -0.65
SYNM-203ENST00000560674 KNL1Q8NG31 2342 aa11.02□□□□□ -0.65
SYNM-203ENST00000560674 CRXO43186 299 aaPredicted RBP11.02□□□□□ -0.65
SYNM-203ENST00000560674 SPINT1O43278 529 aa11.02□□□□□ -0.65
SYNM-203ENST00000560674 PPP1CCP36873 323 aaKnown RBP11.02□□□□□ -0.65
SYNM-203ENST00000560674 CLDN18P56856 261 aa11.02□□□□□ -0.65
SYNM-203ENST00000560674 PAFAH1B2P68402 229 aa11.02□□□□□ -0.65
SYNM-203ENST00000560674 ABLIM2Q6H8Q1 611 aa11.02□□□□□ -0.65
SYNM-203ENST00000560674 SBF2Q86WG5 1849 aa11.02□□□□□ -0.65
SYNM-203ENST00000560674 NMBP08949 121 aa11.02□□□□□ -0.65
SYNM-203ENST00000560674 ASAH2BP0C7U1 165 aa11.02□□□□□ -0.65
SYNM-203ENST00000560674 SRP14P37108 136 aaKnown RBP11.02□□□□□ -0.65
SYNM-203ENST00000560674 RTP5Q14D33 572 aa11.02□□□□□ -0.65
SYNM-203ENST00000560674 GUCA2BQ16661 112 aa11.02□□□□□ -0.65
SYNM-203ENST00000560674 TMUB1Q9BVT8 246 aa11.02□□□□□ -0.65
SYNM-203ENST00000560674 SMOC1Q9H4F8 434 aa11.02□□□□□ -0.65
SYNM-203ENST00000560674 IGHV3OR15-7A0A075B7D8 119 aa11.01□□□□□ -0.65
SYNM-203ENST00000560674 IGKV1D-16P01601 117 aa11.01□□□□□ -0.65
SYNM-203ENST00000560674 RUNX1Q01196 453 aa11.01□□□□□ -0.65
SYNM-203ENST00000560674 GABRA6Q16445 453 aa11.01□□□□□ -0.65
SYNM-203ENST00000560674 FBXW9Q5XUX1 488 aa11.01□□□□□ -0.65
SYNM-203ENST00000560674 ZNF385AQ96PM9 386 aaKnown RBP11.01□□□□□ -0.65
SYNM-203ENST00000560674 PAXXQ9BUH6 204 aa11.01□□□□□ -0.65
SYNM-203ENST00000560674 QSER1Q2KHR3 1735 aa11.01□□□□□ -0.65
SYNM-203ENST00000560674 SMCHD1A6NHR9 2005 aa11.01□□□□□ -0.65
SYNM-203ENST00000560674 COL4A1P02462 1669 aa11.01□□□□□ -0.65
SYNM-203ENST00000560674 LOC102724200A0A096LPH7 203 aaPredicted RBP11.01□□□□□ -0.65
SYNM-203ENST00000560674 IGHV5-10-1A0A0J9YXX1 117 aa11.01□□□□□ -0.65
SYNM-203ENST00000560674 A0A0U1RQV5 110 aa11.01□□□□□ -0.65
SYNM-203ENST00000560674 CDX4O14627 284 aaPredicted RBP11.01□□□□□ -0.65
SYNM-203ENST00000560674 FOXS1O43638 330 aa11.01□□□□□ -0.65
SYNM-203ENST00000560674 HPRT1P00492 218 aa11.01□□□□□ -0.65
SYNM-203ENST00000560674 KLF7O75840 302 aaPredicted RBP11.01□□□□□ -0.65
SYNM-203ENST00000560674 HLA-DQB1P01920 261 aa11.01□□□□□ -0.65
SYNM-203ENST00000560674 MDP1Q86V88 176 aa11.01□□□□□ -0.65
SYNM-203ENST00000560674 OR4C12Q96R67 309 aa11.01□□□□□ -0.65
SYNM-203ENST00000560674 ZFP30Q9Y2G7 519 aa11.01□□□□□ -0.65
SYNM-203ENST00000560674 WDR54Q9H977 334 aa11.01□□□□□ -0.65
SYNM-203ENST00000560674 ZNF71Q9NQZ8 489 aaPredicted RBP11.01□□□□□ -0.65
SYNM-203ENST00000560674 HIGD1AQ9Y241 93 aa11.01□□□□□ -0.65
SYNM-203ENST00000560674 COL10A1Q03692 680 aa11□□□□□ -0.65
SYNM-203ENST00000560674 R4GN57 208 aa11□□□□□ -0.65
SYNM-203ENST00000560674 DXOO77932 396 aaKnown RBP11□□□□□ -0.65
SYNM-203ENST00000560674 HBZP02008 142 aa11□□□□□ -0.65
SYNM-203ENST00000560674 SMUG1Q53HV7 270 aa11□□□□□ -0.65
SYNM-203ENST00000560674 GMPPAQ96IJ6 420 aaPredicted RBP11□□□□□ -0.65
SYNM-203ENST00000560674 RBM14Q96PK6 669 aaKnown RBP11□□□□□ -0.65
SYNM-203ENST00000560674 NPVFQ9HCQ7 196 aa11□□□□□ -0.65
SYNM-203ENST00000560674 ASCC3Q8N3C0 2202 aaKnown RBP11□□□□□ -0.65
SYNM-203ENST00000560674 TMSB15BA0A087X1C1 80 aa11□□□□□ -0.65
SYNM-203ENST00000560674 TRBV5-5A0A0J9YX44 114 aa11□□□□□ -0.65
SYNM-203ENST00000560674 H0Y980 276 aa11□□□□□ -0.65
SYNM-203ENST00000560674 H3BVH4 76 aa11□□□□□ -0.65
SYNM-203ENST00000560674 LIMS1P48059 325 aa11□□□□□ -0.65
SYNM-203ENST00000560674 PLPPR5Q32ZL2 321 aa11□□□□□ -0.65
SYNM-203ENST00000560674 TEX30Q5JUR7 227 aa11□□□□□ -0.65
SYNM-203ENST00000560674 LRRC3BQ96PB8 259 aa11□□□□□ -0.65
SYNM-203ENST00000560674 TP53RKQ96S44 253 aa11□□□□□ -0.65
SYNM-203ENST00000560674 C1QCP02747 245 aa11□□□□□ -0.65
SYNM-203ENST00000560674 APELAP0DMC3 54 aa11□□□□□ -0.65
SYNM-203ENST00000560674 COL5A1-AS1Q5SY13 56 aa11□□□□□ -0.65
SYNM-203ENST00000560674 FAM27BQ5VT28 67 aa11□□□□□ -0.65
SYNM-203ENST00000560674 RND1Q92730 232 aa11□□□□□ -0.65
SYNM-203ENST00000560674 ZNF488Q96MN9 340 aa11□□□□□ -0.65
SYNM-203ENST00000560674 NINQ8N4C6 2090 aa11□□□□□ -0.65
SYNM-203ENST00000560674 KIR2DL1P43626 348 aaPredicted RBP11□□□□□ -0.65
SYNM-203ENST00000560674 PRNTQ86SH4 94 aa11□□□□□ -0.65
SYNM-203ENST00000560674 TMEM252Q8N6L7 170 aa11□□□□□ -0.65
SYNM-203ENST00000560674 TUBD1Q9UJT1 453 aa11□□□□□ -0.65
SYNM-203ENST00000560674 MFAP2P55001 183 aa10.99□□□□□ -0.65
SYNM-203ENST00000560674 ZNF660Q6AZW8 331 aaPredicted RBP10.99□□□□□ -0.65
SYNM-203ENST00000560674 NUDT16L1Q9BRJ7 211 aaKnown RBP10.99□□□□□ -0.65
SYNM-203ENST00000560674 MS4A5Q9H3V2 200 aa10.99□□□□□ -0.65
SYNM-203ENST00000560674 WIPI2Q9Y4P8 454 aa10.99□□□□□ -0.65
SYNM-203ENST00000560674 PXMP4Q9Y6I8 212 aa10.99□□□□□ -0.65
SYNM-203ENST00000560674 ADAMTSL1Q8N6G6 1762 aa10.99□□□□□ -0.65
SYNM-203ENST00000560674 KIAA0100Q14667 2235 aaKnown RBP10.99□□□□□ -0.65
SYNM-203ENST00000560674 RAB29O14966 203 aa10.99□□□□□ -0.65
SYNM-203ENST00000560674 MDKP21741 143 aaPredicted RBP10.99□□□□□ -0.65
SYNM-203ENST00000560674 SOSTQ9BQB4 213 aa10.99□□□□□ -0.65
SYNM-203ENST00000560674 OR2J1Q9GZK6 312 aa10.99□□□□□ -0.65
SYNM-203ENST00000560674 TNFRSF19Q9NS68 423 aa10.99□□□□□ -0.65
SYNM-203ENST00000560674 MYO7AQ13402 2215 aa10.99□□□□□ -0.65
SYNM-203ENST00000560674 OR4C46A6NHA9 309 aa10.99□□□□□ -0.65
SYNM-203ENST00000560674 C1orf53Q5VUE5 145 aa10.99□□□□□ -0.65
SYNM-203ENST00000560674 NUP214P35658 2090 aaPredicted RBP10.99□□□□□ -0.65
SYNM-203ENST00000560674 HSPB1P04792 205 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 155.9 ms