RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 RAB13P51153 203 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 POLR2JP52435 117 aaKnown RBP1.82□□□□□ -2.12
SCFD1-219ENST00000556413 TAS2R41P59536 307 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 CDK6Q00534 326 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 GABPB1Q06547 395 aaPredicted RBP1.82□□□□□ -2.12
SCFD1-219ENST00000556413 ZNF404Q494X3 552 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 TIGITQ495A1 244 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 SLC36A2Q495M3 483 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 FAM74A3Q4VXF1 159 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 LRRC23Q53EV4 343 aaPredicted RBP1.82□□□□□ -2.12
SCFD1-219ENST00000556413 CCDC92Q53HC0 331 aaPredicted RBP1.82□□□□□ -2.12
SCFD1-219ENST00000556413 TTMPQ5BVD1 217 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 MESTQ5EB52 335 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 DEFB121Q5J5C9 76 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 CLEC12AQ5QGZ9 265 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 HHATQ5VTY9 493 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 OR8G2PQ6IF36 304 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 TTC33Q6PID6 262 aaPredicted RBP1.82□□□□□ -2.12
SCFD1-219ENST00000556413 DHRS4L2Q6PKH6 230 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 TBPL2Q6SJ96 375 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 ZFP2Q6ZN57 461 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 RNF165Q6ZSG1 346 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 SSX8Q7RTT4 187 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 DHDDSQ86SQ9 333 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 WDR86Q86TI4 376 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 NAA40Q86UY6 237 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 LRRC28Q86X40 367 aaPredicted RBP1.82□□□□□ -2.12
SCFD1-219ENST00000556413 FUNDC1Q8IVP5 155 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 SPICQ8N5J4 248 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 TMEM252Q8N6L7 170 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 TRIML2Q8N7C3 387 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 RNF148Q8N7C7 305 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 ZNF283Q8N7M2 679 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 MNS1Q8NEH6 495 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 OR8B3Q8NGG8 313 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 OR52I1Q8NGK6 324 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 OR6X1Q8NH79 312 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 H1FXQ92522 213 aaKnown RBP1.82□□□□□ -2.12
SCFD1-219ENST00000556413 FCGR1BQ92637 280 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 GTF2H4Q92759 462 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 SGTBQ96EQ0 304 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 SLC25A44Q96H78 314 aaPredicted RBP1.82□□□□□ -2.12
SCFD1-219ENST00000556413 ITCHQ96J02 903 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 Q96M85 177 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 OR8B2Q96RD0 313 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 MBOAT4Q96T53 435 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 CCL13Q99616 98 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 ECSITQ9BQ95 431 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 PRSS27Q9BQR3 290 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 TTTY10Q9BZA0 68 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 BCL2L14Q9BZR8 327 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 TMEM27Q9HBJ8 222 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 SLCO1B3Q9NPD5 702 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 POLE4Q9NR33 117 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 INIPQ9NRY2 104 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 CCDC167Q9P0B6 97 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 CLN8Q9UBY8 286 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 LGALS13Q9UHV8 139 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 AURKCQ9UQB9 309 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 IFT52Q9Y366 437 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 CDH10Q9Y6N8 788 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 ALMS1Q8TCU4 4167 aa1.81□□□□□ -2.12
SCFD1-219ENST00000556413 PPIAL4EA0A075B759 164 aa1.81□□□□□ -2.12
SCFD1-219ENST00000556413 A0A096LPI6 279 aa1.81□□□□□ -2.12
SCFD1-219ENST00000556413 A0A1W2PRG6 482 aa1.81□□□□□ -2.12
SCFD1-219ENST00000556413 TRAPPC13A5PLN9 417 aa1.81□□□□□ -2.12
SCFD1-219ENST00000556413 PPIAL4DF5H284 164 aa1.81□□□□□ -2.12
SCFD1-219ENST00000556413 F5H5K5 113 aa1.81□□□□□ -2.12
SCFD1-219ENST00000556413 RNASEK-C17orf49H0YIS7 233 aa1.81□□□□□ -2.12
SCFD1-219ENST00000556413 H3BQF6 201 aa1.81□□□□□ -2.12
SCFD1-219ENST00000556413 M0QX08 132 aa1.81□□□□□ -2.12
SCFD1-219ENST00000556413 LGALS8O00214 317 aa1.81□□□□□ -2.12
SCFD1-219ENST00000556413 DCTN6O00399 190 aa1.81□□□□□ -2.12
SCFD1-219ENST00000556413 FCN1O00602 326 aa1.81□□□□□ -2.12
SCFD1-219ENST00000556413 CDC42EP2O14613 210 aa1.81□□□□□ -2.12
SCFD1-219ENST00000556413 SGCEO43556 437 aa1.81□□□□□ -2.12
SCFD1-219ENST00000556413 CHP2O43745 196 aa1.81□□□□□ -2.12
SCFD1-219ENST00000556413 ENSAO43768 121 aaKnown RBP1.81□□□□□ -2.12
SCFD1-219ENST00000556413 ANGPTL7O43827 346 aa1.81□□□□□ -2.12
SCFD1-219ENST00000556413 OR2T1O43869 369 aa1.81□□□□□ -2.12
SCFD1-219ENST00000556413 SLC16A7O60669 478 aa1.81□□□□□ -2.12
SCFD1-219ENST00000556413 SNAP29O95721 258 aa1.81□□□□□ -2.12
SCFD1-219ENST00000556413 ASAH2BP0C7U1 165 aa1.81□□□□□ -2.12
SCFD1-219ENST00000556413 PPIAL4FP0DN26 164 aa1.81□□□□□ -2.12
SCFD1-219ENST00000556413 PIPP12273 146 aaPredicted RBP1.81□□□□□ -2.12
SCFD1-219ENST00000556413 ANXA3P12429 323 aa1.81□□□□□ -2.12
SCFD1-219ENST00000556413 NCK1P16333 377 aa1.81□□□□□ -2.12
SCFD1-219ENST00000556413 RCC1P18754 421 aaPredicted RBP1.81□□□□□ -2.12
SCFD1-219ENST00000556413 GSTM3P21266 225 aa1.81□□□□□ -2.12
SCFD1-219ENST00000556413 MSR1P21757 451 aa1.81□□□□□ -2.12
SCFD1-219ENST00000556413 CD24P25063 80 aa1.81□□□□□ -2.12
SCFD1-219ENST00000556413 PYCR1P32322 319 aa1.81□□□□□ -2.12
SCFD1-219ENST00000556413 KRTAP12-4P60329 112 aa1.81□□□□□ -2.12
SCFD1-219ENST00000556413 MAGOHP61326 146 aaKnown RBP1.81□□□□□ -2.12
SCFD1-219ENST00000556413 ECH1Q13011 328 aa1.81□□□□□ -2.12
SCFD1-219ENST00000556413 MAB21L1Q13394 359 aa1.81□□□□□ -2.12
SCFD1-219ENST00000556413 UNC119Q13432 240 aa1.81□□□□□ -2.12
SCFD1-219ENST00000556413 TMEM155Q4W5P6 130 aa1.81□□□□□ -2.12
SCFD1-219ENST00000556413 VAX1Q5SQQ9 334 aa1.81□□□□□ -2.12
SCFD1-219ENST00000556413 C10orf128Q5T292 105 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms