RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 PPP2CBP62714 309 aa7.85□□□□□ -1.15
GTF2A1-203ENST00000553612 PPP2CAP67775 309 aa7.85□□□□□ -1.15
GTF2A1-203ENST00000553612 ICAM4Q14773 271 aa7.85□□□□□ -1.15
GTF2A1-203ENST00000553612 KIR3DS1Q14943 382 aa7.85□□□□□ -1.15
GTF2A1-203ENST00000553612 ZNF260Q3ZCT1 412 aa7.85□□□□□ -1.15
GTF2A1-203ENST00000553612 CXCL17Q6UXB2 119 aa7.85□□□□□ -1.15
GTF2A1-203ENST00000553612 FBXL7Q9UJT9 491 aa7.85□□□□□ -1.15
GTF2A1-203ENST00000553612 C3orf80F5H4A9 247 aa7.85□□□□□ -1.15
GTF2A1-203ENST00000553612 LCNL1Q6ZST4 164 aa7.85□□□□□ -1.15
GTF2A1-203ENST00000553612 OR10AC1Q8NH08 325 aa7.85□□□□□ -1.15
GTF2A1-203ENST00000553612 SLC52A3Q9NQ40 469 aa7.85□□□□□ -1.15
GTF2A1-203ENST00000553612 CYTL1Q9NRR1 136 aa7.85□□□□□ -1.15
GTF2A1-203ENST00000553612 ATP5LO75964 103 aa7.85□□□□□ -1.15
GTF2A1-203ENST00000553612 SSTR5P35346 364 aa7.85□□□□□ -1.15
GTF2A1-203ENST00000553612 DEFB110Q30KQ9 67 aa7.85□□□□□ -1.15
GTF2A1-203ENST00000553612 BHLHA9Q7RTU4 235 aa7.85□□□□□ -1.15
GTF2A1-203ENST00000553612 YAF2Q8IY57 180 aa7.85□□□□□ -1.15
GTF2A1-203ENST00000553612 DIO2Q92813 273 aa7.85□□□□□ -1.15
GTF2A1-203ENST00000553612 ZG16BQ96DA0 208 aa7.85□□□□□ -1.15
GTF2A1-203ENST00000553612 PELI1Q96FA3 418 aa7.85□□□□□ -1.15
GTF2A1-203ENST00000553612 OR2V2Q96R30 315 aa7.85□□□□□ -1.15
GTF2A1-203ENST00000553612 NPVFQ9HCQ7 196 aa7.85□□□□□ -1.15
GTF2A1-203ENST00000553612 ONECUT1Q9UBC0 465 aa7.85□□□□□ -1.15
GTF2A1-203ENST00000553612 TMEM202A6NGA9 273 aa7.84□□□□□ -1.15
GTF2A1-203ENST00000553612 C17orf112F2Z3M2 114 aa7.84□□□□□ -1.15
GTF2A1-203ENST00000553612 ADTRPQ96IZ2 230 aa7.84□□□□□ -1.15
GTF2A1-203ENST00000553612 MRPS16Q9Y3D3 137 aaKnown RBP7.84□□□□□ -1.15
GTF2A1-203ENST00000553612 LMO7Q8WWI1 1683 aa7.84□□□□□ -1.15
GTF2A1-203ENST00000553612 SH2D6Q7Z4S9 175 aa7.84□□□□□ -1.15
GTF2A1-203ENST00000553612 IRF7Q92985 503 aa7.84□□□□□ -1.15
GTF2A1-203ENST00000553612 RNF126Q9BV68 326 aa7.84□□□□□ -1.15
GTF2A1-203ENST00000553612 RTN4RQ9BZR6 473 aa7.84□□□□□ -1.15
GTF2A1-203ENST00000553612 SLIT3O75094 1523 aa7.84□□□□□ -1.15
GTF2A1-203ENST00000553612 GP1BBP13224 206 aa7.84□□□□□ -1.15
GTF2A1-203ENST00000553612 IGFBP6P24592 240 aaPredicted RBP7.84□□□□□ -1.15
GTF2A1-203ENST00000553612 C9orf135Q5VTT2 229 aa7.84□□□□□ -1.15
GTF2A1-203ENST00000553612 SPATA31B1PQ5VZV4 182 aa7.84□□□□□ -1.15
GTF2A1-203ENST00000553612 SLC16A11Q8NCK7 471 aa7.84□□□□□ -1.15
GTF2A1-203ENST00000553612 GPR146Q96CH1 333 aa7.84□□□□□ -1.15
GTF2A1-203ENST00000553612 GPHA2Q96T91 129 aa7.84□□□□□ -1.15
GTF2A1-203ENST00000553612 GLIPR2Q9H4G4 154 aa7.84□□□□□ -1.15
GTF2A1-203ENST00000553612 SDF2L1Q9HCN8 221 aa7.84□□□□□ -1.15
GTF2A1-203ENST00000553612 NECAP2Q9NVZ3 263 aa7.84□□□□□ -1.15
GTF2A1-203ENST00000553612 CLDND1Q9NY35 253 aa7.84□□□□□ -1.15
GTF2A1-203ENST00000553612 F8VVB4 439 aa7.84□□□□□ -1.15
GTF2A1-203ENST00000553612 F8VWA3 439 aa7.84□□□□□ -1.15
GTF2A1-203ENST00000553612 LEPROTL1O95214 131 aa7.84□□□□□ -1.15
GTF2A1-203ENST00000553612 ZNF137PP52743 207 aa7.84□□□□□ -1.15
GTF2A1-203ENST00000553612 C5orf64Q2M2E5 130 aa7.84□□□□□ -1.15
GTF2A1-203ENST00000553612 SLC25A33Q9BSK2 321 aa7.84□□□□□ -1.15
GTF2A1-203ENST00000553612 SMDT1Q9H4I9 107 aa7.84□□□□□ -1.15
GTF2A1-203ENST00000553612 H0YIZ8 118 aa7.84□□□□□ -1.16
GTF2A1-203ENST00000553612 H3BMH7 237 aa7.84□□□□□ -1.16
GTF2A1-203ENST00000553612 CD5LO43866 347 aa7.84□□□□□ -1.16
GTF2A1-203ENST00000553612 C3orf79P0CE67 100 aa7.84□□□□□ -1.16
GTF2A1-203ENST00000553612 IL3RAP26951 378 aa7.84□□□□□ -1.16
GTF2A1-203ENST00000553612 OR3A4PP47883 348 aa7.84□□□□□ -1.16
GTF2A1-203ENST00000553612 MRPL17Q9NRX2 175 aaKnown RBP7.84□□□□□ -1.16
GTF2A1-203ENST00000553612 ZNF391Q9UJN7 358 aa7.84□□□□□ -1.16
GTF2A1-203ENST00000553612 OR1A2Q9Y585 309 aa7.84□□□□□ -1.16
GTF2A1-203ENST00000553612 PRRC2BQ5JSZ5 2229 aaKnown RBP7.84□□□□□ -1.16
GTF2A1-203ENST00000553612 ANKRD30BLA7E2S9 258 aa7.83□□□□□ -1.16
GTF2A1-203ENST00000553612 PDLIM4P50479 330 aa7.83□□□□□ -1.16
GTF2A1-203ENST00000553612 NOGQ13253 232 aa7.83□□□□□ -1.16
GTF2A1-203ENST00000553612 FXYD3Q14802 87 aa7.83□□□□□ -1.16
GTF2A1-203ENST00000553612 PRSS8Q16651 343 aa7.83□□□□□ -1.16
GTF2A1-203ENST00000553612 LRRC75AQ8NAA5 344 aa7.83□□□□□ -1.16
GTF2A1-203ENST00000553612 TMEM70Q9BUB7 260 aa7.83□□□□□ -1.16
GTF2A1-203ENST00000553612 TAAR3PQ9P1P4 343 aa7.83□□□□□ -1.16
GTF2A1-203ENST00000553612 ARRDC5A6NEK1 342 aa7.83□□□□□ -1.16
GTF2A1-203ENST00000553612 IL18BPO95998 194 aa7.83□□□□□ -1.16
GTF2A1-203ENST00000553612 EDDM3BP56851 147 aa7.83□□□□□ -1.16
GTF2A1-203ENST00000553612 TIGITQ495A1 244 aa7.83□□□□□ -1.16
GTF2A1-203ENST00000553612 KLF17Q5JT82 389 aaPredicted RBP7.83□□□□□ -1.16
GTF2A1-203ENST00000553612 EMG1Q92979 244 aaKnown RBP7.83□□□□□ -1.16
GTF2A1-203ENST00000553612 CDH20Q9HBT6 801 aa7.83□□□□□ -1.16
GTF2A1-203ENST00000553612 K7EP34 96 aa7.83□□□□□ -1.16
GTF2A1-203ENST00000553612 ADAM20O43506 726 aa7.83□□□□□ -1.16
GTF2A1-203ENST00000553612 DUX1O43812 170 aa7.83□□□□□ -1.16
GTF2A1-203ENST00000553612 NDUFB4O95168 129 aa7.83□□□□□ -1.16
GTF2A1-203ENST00000553612 SLC35E2P0CK97 266 aa7.83□□□□□ -1.16
GTF2A1-203ENST00000553612 ZFP36L2P47974 494 aaKnown RBP7.83□□□□□ -1.16
GTF2A1-203ENST00000553612 PSG6Q00889 435 aa7.83□□□□□ -1.16
GTF2A1-203ENST00000553612 TIMM23BQ5SRD1 257 aa7.83□□□□□ -1.16
GTF2A1-203ENST00000553612 POC1AQ8NBT0 407 aa7.83□□□□□ -1.16
GTF2A1-203ENST00000553612 SPSB4Q96A44 273 aa7.83□□□□□ -1.16
GTF2A1-203ENST00000553612 DUX5Q96PT3 197 aa7.83□□□□□ -1.16
GTF2A1-203ENST00000553612 NDFIP1Q9BT67 221 aa7.83□□□□□ -1.16
GTF2A1-203ENST00000553612 TNRC6AQ8NDV7 1962 aaKnown RBP7.83□□□□□ -1.16
GTF2A1-203ENST00000553612 LOC107986453A0A1B0GWG9 222 aa7.83□□□□□ -1.16
GTF2A1-203ENST00000553612 UBE2NP61088 152 aaKnown RBP7.83□□□□□ -1.16
GTF2A1-203ENST00000553612 DACT2Q5SW24 774 aa7.83□□□□□ -1.16
GTF2A1-203ENST00000553612 TPRG1Q6ZUI0 275 aa7.83□□□□□ -1.16
GTF2A1-203ENST00000553612 MRGPRGQ86SM5 289 aa7.83□□□□□ -1.16
GTF2A1-203ENST00000553612 NAA60Q9H7X0 242 aa7.83□□□□□ -1.16
GTF2A1-203ENST00000553612 WDR76Q9H967 626 aa7.83□□□□□ -1.16
GTF2A1-203ENST00000553612 C9orf172C9J069 976 aa7.83□□□□□ -1.16
GTF2A1-203ENST00000553612 TSPAN2O60636 221 aa7.83□□□□□ -1.16
GTF2A1-203ENST00000553612 LILRA1O75019 489 aa7.83□□□□□ -1.16
GTF2A1-203ENST00000553612 SGCBQ16585 318 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms