RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 A0A0U1RQV5 110 aa9.22□□□□□ -0.93
TGFBR1-209ENST00000552516 RNF212BA8MTL3 300 aa9.22□□□□□ -0.93
TGFBR1-209ENST00000552516 ZNF727A8MUV8 499 aa9.22□□□□□ -0.93
TGFBR1-209ENST00000552516 CECR9P0C854 216 aa9.22□□□□□ -0.93
TGFBR1-209ENST00000552516 TBPP20226 339 aa9.22□□□□□ -0.93
TGFBR1-209ENST00000552516 S100PP25815 95 aa9.22□□□□□ -0.93
TGFBR1-209ENST00000552516 RAB31Q13636 194 aa9.22□□□□□ -0.93
TGFBR1-209ENST00000552516 HIST2H3AQ71DI3 136 aa9.22□□□□□ -0.93
TGFBR1-209ENST00000552516 COMMD5Q9GZQ3 224 aa9.22□□□□□ -0.93
TGFBR1-209ENST00000552516 C19orf12Q9NSK7 152 aa9.22□□□□□ -0.93
TGFBR1-209ENST00000552516 LIN7CQ9NUP9 197 aaKnown RBP9.22□□□□□ -0.93
TGFBR1-209ENST00000552516 ZNF716A6NP11 495 aa9.22□□□□□ -0.93
TGFBR1-209ENST00000552516 MBPP02686 304 aaPredicted RBP9.22□□□□□ -0.93
TGFBR1-209ENST00000552516 TLE4Q04727 773 aa9.22□□□□□ -0.93
TGFBR1-209ENST00000552516 PSG7Q13046 419 aa9.22□□□□□ -0.93
TGFBR1-209ENST00000552516 GUK1Q16774 197 aa9.22□□□□□ -0.93
TGFBR1-209ENST00000552516 ETV3LQ6ZN32 361 aa9.22□□□□□ -0.93
TGFBR1-209ENST00000552516 SGK494Q96LW2 274 aa9.22□□□□□ -0.93
TGFBR1-209ENST00000552516 SELENOKQ9Y6D0 94 aa9.22□□□□□ -0.93
TGFBR1-209ENST00000552516 EML6Q6ZMW3 1958 aa9.22□□□□□ -0.93
TGFBR1-209ENST00000552516 EGR1P18146 543 aa9.22□□□□□ -0.93
TGFBR1-209ENST00000552516 DLX1P56177 255 aa9.22□□□□□ -0.93
TGFBR1-209ENST00000552516 ARHGAP21Q5T5U3 1957 aa9.22□□□□□ -0.93
TGFBR1-209ENST00000552516 MISP3Q96FF7 219 aa9.22□□□□□ -0.93
TGFBR1-209ENST00000552516 TRAF4Q9BUZ4 470 aaPredicted RBP9.22□□□□□ -0.93
TGFBR1-209ENST00000552516 PIGMQ9H3S5 423 aa9.22□□□□□ -0.93
TGFBR1-209ENST00000552516 A0A1W2PPQ1 181 aa9.22□□□□□ -0.93
TGFBR1-209ENST00000552516 J3QT63 122 aa9.22□□□□□ -0.93
TGFBR1-209ENST00000552516 HBZP02008 142 aa9.22□□□□□ -0.93
TGFBR1-209ENST00000552516 NMBP08949 121 aa9.22□□□□□ -0.93
TGFBR1-209ENST00000552516 EAF1Q96JC9 268 aaPredicted RBP9.22□□□□□ -0.93
TGFBR1-209ENST00000552516 UBTD1Q9HAC8 227 aa9.22□□□□□ -0.93
TGFBR1-209ENST00000552516 hCG_1809904A0A1W2PP81 198 aa9.21□□□□□ -0.93
TGFBR1-209ENST00000552516 A0A1W2PR64 198 aa9.21□□□□□ -0.93
TGFBR1-209ENST00000552516 A0A1W2PRV1 198 aa9.21□□□□□ -0.93
TGFBR1-209ENST00000552516 H3BTX0 84 aa9.21□□□□□ -0.93
TGFBR1-209ENST00000552516 MMP9P14780 707 aa9.21□□□□□ -0.93
TGFBR1-209ENST00000552516 FSTP19883 344 aa9.21□□□□□ -0.93
TGFBR1-209ENST00000552516 CD24P25063 80 aa9.21□□□□□ -0.93
TGFBR1-209ENST00000552516 PRR30Q53SZ7 412 aaPredicted RBP9.21□□□□□ -0.93
TGFBR1-209ENST00000552516 LHFPL4Q7Z7J7 247 aa9.21□□□□□ -0.93
TGFBR1-209ENST00000552516 Q96M66 194 aa9.21□□□□□ -0.93
TGFBR1-209ENST00000552516 RAXQ9Y2V3 346 aa9.21□□□□□ -0.93
TGFBR1-209ENST00000552516 HILPDAQ9Y5L2 63 aa9.21□□□□□ -0.93
TGFBR1-209ENST00000552516 REG1AP05451 166 aa9.21□□□□□ -0.93
TGFBR1-209ENST00000552516 PRDX2P32119 198 aa9.21□□□□□ -0.93
TGFBR1-209ENST00000552516 ZNF528Q3MIS6 628 aa9.21□□□□□ -0.93
TGFBR1-209ENST00000552516 OR5A2Q8NGI9 324 aa9.21□□□□□ -0.93
TGFBR1-209ENST00000552516 CMTM3Q96MX0 182 aa9.21□□□□□ -0.93
TGFBR1-209ENST00000552516 HIVEP3Q5T1R4 2406 aa9.21□□□□□ -0.93
TGFBR1-209ENST00000552516 DYSFO75923 2080 aa9.21□□□□□ -0.93
TGFBR1-209ENST00000552516 CTXN2P0C2S0 81 aa9.21□□□□□ -0.94
TGFBR1-209ENST00000552516 KHDC1LQ5JSQ8 128 aa9.21□□□□□ -0.94
TGFBR1-209ENST00000552516 ZNF385CQ66K41 422 aaPredicted RBP9.21□□□□□ -0.94
TGFBR1-209ENST00000552516 RPL36A-HNRNPH2H7BZ11 118 aa9.21□□□□□ -0.94
TGFBR1-209ENST00000552516 LINC01387J3KSC0 135 aa9.21□□□□□ -0.94
TGFBR1-209ENST00000552516 OR2C1O95371 312 aa9.21□□□□□ -0.94
TGFBR1-209ENST00000552516 CPN1P15169 458 aa9.21□□□□□ -0.94
TGFBR1-209ENST00000552516 SRPXP78539 464 aa9.21□□□□□ -0.94
TGFBR1-209ENST00000552516 MZT1Q08AG7 82 aa9.21□□□□□ -0.94
TGFBR1-209ENST00000552516 BLNKQ8WV28 456 aa9.21□□□□□ -0.94
TGFBR1-209ENST00000552516 CRIM1Q9NZV1 1036 aa9.21□□□□□ -0.94
TGFBR1-209ENST00000552516 MPC1Q9Y5U8 109 aa9.21□□□□□ -0.94
TGFBR1-209ENST00000552516 IGKV1D-13A0A0B4J2D9 117 aa9.21□□□□□ -0.94
TGFBR1-209ENST00000552516 OR5B21A6NL26 309 aa9.21□□□□□ -0.94
TGFBR1-209ENST00000552516 MFNGO00587 321 aa9.21□□□□□ -0.94
TGFBR1-209ENST00000552516 CTSDP07339 412 aaPredicted RBP9.21□□□□□ -0.94
TGFBR1-209ENST00000552516 IGKV1-13P0DP09 117 aa9.21□□□□□ -0.94
TGFBR1-209ENST00000552516 SLC38A11Q08AI6 406 aa9.21□□□□□ -0.94
TGFBR1-209ENST00000552516 RPL39P5Q59GN2 51 aa9.21□□□□□ -0.94
TGFBR1-209ENST00000552516 TMEM54Q969K7 222 aa9.21□□□□□ -0.94
TGFBR1-209ENST00000552516 PIPOXQ9P0Z9 390 aa9.21□□□□□ -0.94
TGFBR1-209ENST00000552516 A1L4Q6 167 aa9.2□□□□□ -0.94
TGFBR1-209ENST00000552516 CXXC4Q9H2H0 198 aa9.2□□□□□ -0.94
TGFBR1-209ENST00000552516 OR51I2Q9H344 312 aa9.2□□□□□ -0.94
TGFBR1-209ENST00000552516 IGHV3OR16-8A0A075B7F1 116 aa9.2□□□□□ -0.94
TGFBR1-209ENST00000552516 FAM74A7A6NL05 159 aa9.2□□□□□ -0.94
TGFBR1-209ENST00000552516 CHRNA7P36544 502 aa9.2□□□□□ -0.94
TGFBR1-209ENST00000552516 EWSR1Q01844 656 aaKnown RBP eCLIP9.2□□□□□ -0.942e-8■■■■□ 24.6
TGFBR1-209ENST00000552516 FAM74A3Q4VXF1 159 aa9.2□□□□□ -0.94
TGFBR1-209ENST00000552516 FFAR4Q5NUL3 377 aa9.2□□□□□ -0.94
TGFBR1-209ENST00000552516 SIRT7Q9NRC8 400 aa9.2□□□□□ -0.94
TGFBR1-209ENST00000552516 hCG_38984A0A1B0GV85 526 aa9.2□□□□□ -0.94
TGFBR1-209ENST00000552516 C16orf97H3BN30 126 aa9.2□□□□□ -0.94
TGFBR1-209ENST00000552516 NDUFB3O43676 98 aa9.2□□□□□ -0.94
TGFBR1-209ENST00000552516 ZNF880Q6PDB4 577 aa9.2□□□□□ -0.94
TGFBR1-209ENST00000552516 SMIM7Q9BQ49 75 aa9.2□□□□□ -0.94
TGFBR1-209ENST00000552516 LAMP3Q9UQV4 416 aa9.2□□□□□ -0.94
TGFBR1-209ENST00000552516 OR2W1Q9Y3N9 320 aa9.2□□□□□ -0.94
TGFBR1-209ENST00000552516 USP9YO00507 2555 aaPredicted RBP9.2□□□□□ -0.94
TGFBR1-209ENST00000552516 RAG2P55895 527 aa9.2□□□□□ -0.94
TGFBR1-209ENST00000552516 FAM216BQ8N7L0 139 aa9.2□□□□□ -0.94
TGFBR1-209ENST00000552516 TNFSF18Q9UNG2 199 aa9.2□□□□□ -0.94
TGFBR1-209ENST00000552516 ZNF503-AS2A6NEH8 195 aa9.2□□□□□ -0.94
TGFBR1-209ENST00000552516 CYB5BO43169 146 aa9.2□□□□□ -0.94
TGFBR1-209ENST00000552516 OR4A8P0C604 315 aa9.2□□□□□ -0.94
TGFBR1-209ENST00000552516 NQO2P16083 231 aa9.2□□□□□ -0.94
TGFBR1-209ENST00000552516 KIR3DL3Q8N743 410 aa9.2□□□□□ -0.94
TGFBR1-209ENST00000552516 WDYHV1Q96HA8 205 aa9.2□□□□□ -0.94
TGFBR1-209ENST00000552516 NPDC1Q9NQX5 325 aaPredicted RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms