RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 RTN4IP1Q8WWV3 396 aaPredicted RBP12.8□□□□□ -0.36
DDX55-212ENST00000544738 EAF1Q96JC9 268 aaPredicted RBP12.8□□□□□ -0.36
DDX55-212ENST00000544738 Q96M66 194 aa12.8□□□□□ -0.36
DDX55-212ENST00000544738 MND1Q9BWT6 205 aa12.8□□□□□ -0.36
DDX55-212ENST00000544738 DCLRE1BQ9H816 532 aa12.8□□□□□ -0.36
DDX55-212ENST00000544738 KCNIP1Q9NZI2 227 aa12.8□□□□□ -0.36
DDX55-212ENST00000544738 HBZP02008 142 aa12.79□□□□□ -0.36
DDX55-212ENST00000544738 CDK1P06493 297 aa12.79□□□□□ -0.36
DDX55-212ENST00000544738 UBBP0CG47 229 aa12.79□□□□□ -0.36
DDX55-212ENST00000544738 ACSM3Q53FZ2 586 aa12.79□□□□□ -0.36
DDX55-212ENST00000544738 ZNF329Q86UD4 541 aa12.79□□□□□ -0.36
DDX55-212ENST00000544738 OR8H1Q8NGG4 311 aa12.79□□□□□ -0.36
DDX55-212ENST00000544738 MUC7Q8TAX7 377 aa12.79□□□□□ -0.36
DDX55-212ENST00000544738 GON7Q9BXV9 100 aa12.79□□□□□ -0.36
DDX55-212ENST00000544738 ZFP57Q9NU63 452 aa12.79□□□□□ -0.36
DDX55-212ENST00000544738 LIN7CQ9NUP9 197 aaKnown RBP12.79□□□□□ -0.36
DDX55-212ENST00000544738 IGHV3-72A0A0B4J1Y9 119 aa12.78□□□□□ -0.36
DDX55-212ENST00000544738 UBE2QL1A1L167 161 aa12.78□□□□□ -0.36
DDX55-212ENST00000544738 H0YHG0 523 aa12.78□□□□□ -0.36
DDX55-212ENST00000544738 PDCD6O75340 191 aa12.78□□□□□ -0.36
DDX55-212ENST00000544738 MOSP00540 346 aa12.78□□□□□ -0.36
DDX55-212ENST00000544738 RCC1P18754 421 aaPredicted RBP12.78□□□□□ -0.36
DDX55-212ENST00000544738 ZNF137PP52743 207 aa12.78□□□□□ -0.36
DDX55-212ENST00000544738 GABPB1Q06547 395 aaPredicted RBP12.78□□□□□ -0.36
DDX55-212ENST00000544738 GLT8D1Q68CQ7 371 aa12.78□□□□□ -0.36
DDX55-212ENST00000544738 UNQ9370/PRO34162Q6UXP9 181 aa12.78□□□□□ -0.36
DDX55-212ENST00000544738 PRR18Q8N4B5 295 aa12.78□□□□□ -0.36
DDX55-212ENST00000544738 Q8N6K4 173 aa12.78□□□□□ -0.36
DDX55-212ENST00000544738 ZNF439Q8NDP4 499 aa12.78□□□□□ -0.36
DDX55-212ENST00000544738 PHYHIPQ92561 330 aa12.78□□□□□ -0.36
DDX55-212ENST00000544738 NOL4LQ96MY1 436 aaPredicted RBP12.78□□□□□ -0.36
DDX55-212ENST00000544738 ASCL2Q99929 193 aa12.78□□□□□ -0.36
DDX55-212ENST00000544738 ABCG5Q9H222 651 aa12.78□□□□□ -0.36
DDX55-212ENST00000544738 MBNL3Q9NUK0 354 aaKnown RBP12.78□□□□□ -0.36
DDX55-212ENST00000544738 SCN3BQ9NY72 215 aa12.78□□□□□ -0.36
DDX55-212ENST00000544738 LRRC42Q9Y546 428 aa12.78□□□□□ -0.36
DDX55-212ENST00000544738 PTGES3LE9PB15 166 aa12.77□□□□□ -0.37
DDX55-212ENST00000544738 AP4M1O00189 453 aa12.77□□□□□ -0.37
DDX55-212ENST00000544738 RPL23AP62750 156 aaKnown RBP12.77□□□□□ -0.37
DDX55-212ENST00000544738 SPHARQ15513 63 aa12.77□□□□□ -0.37
DDX55-212ENST00000544738 CT45A1Q5HYN5 189 aa12.77□□□□□ -0.37
DDX55-212ENST00000544738 C6orf141Q5SZD1 244 aa12.77□□□□□ -0.37
DDX55-212ENST00000544738 SIGIRRQ6IA17 410 aa12.77□□□□□ -0.37
DDX55-212ENST00000544738 FAM53AQ6NSI3 398 aaPredicted RBP12.77□□□□□ -0.37
DDX55-212ENST00000544738 STPG2Q8N412 459 aa12.77□□□□□ -0.37
DDX55-212ENST00000544738 OR1L1Q8NH94 360 aa12.77□□□□□ -0.37
DDX55-212ENST00000544738 CT45A3Q8NHU0 189 aa12.77□□□□□ -0.37
DDX55-212ENST00000544738 NEDD4LQ96PU5 975 aa12.77□□□□□ -0.37
DDX55-212ENST00000544738 GPR61Q9BZJ8 451 aa12.77□□□□□ -0.37
DDX55-212ENST00000544738 TAF9BQ9HBM6 251 aa12.77□□□□□ -0.37
DDX55-212ENST00000544738 OR2S2Q9NQN1 319 aa12.77□□□□□ -0.37
DDX55-212ENST00000544738 LCE6AA0A183 80 aa12.76□□□□□ -0.37
DDX55-212ENST00000544738 SLC31A2O15432 143 aa12.76□□□□□ -0.37
DDX55-212ENST00000544738 VHLP40337 213 aa12.76□□□□□ -0.37
DDX55-212ENST00000544738 ZNF134P52741 427 aa12.76□□□□□ -0.37
DDX55-212ENST00000544738 MORN2Q502X0 79 aa12.76□□□□□ -0.37
DDX55-212ENST00000544738 C1orf100Q5SVJ3 147 aa12.76□□□□□ -0.37
DDX55-212ENST00000544738 TEX38Q6PEX7 206 aa12.76□□□□□ -0.37
DDX55-212ENST00000544738 OR2W3Q7Z3T1 314 aa12.76□□□□□ -0.37
DDX55-212ENST00000544738 Q8N9W7 124 aa12.76□□□□□ -0.37
DDX55-212ENST00000544738 OR10V1Q8NGI7 309 aa12.76□□□□□ -0.37
DDX55-212ENST00000544738 KCNG3Q8TAE7 436 aa12.76□□□□□ -0.37
DDX55-212ENST00000544738 FAM46BQ96A09 425 aa12.76□□□□□ -0.37
DDX55-212ENST00000544738 RASL11BQ9BPW5 248 aa12.76□□□□□ -0.37
DDX55-212ENST00000544738 TMED9Q9BVK6 235 aa12.76□□□□□ -0.37
DDX55-212ENST00000544738 LINC00527Q9UJ94 153 aa12.76□□□□□ -0.37
DDX55-212ENST00000544738 HUWE1Q7Z6Z7 4374 aaKnown RBP12.76□□□□□ -0.37
DDX55-212ENST00000544738 LYSTQ99698 3801 aa12.76□□□□□ -0.37
DDX55-212ENST00000544738 LANCL1O43813 399 aa12.75□□□□□ -0.37
DDX55-212ENST00000544738 RGS11O94810 467 aa12.75□□□□□ -0.37
DDX55-212ENST00000544738 SRMP19623 302 aa12.75□□□□□ -0.37
DDX55-212ENST00000544738 GPR12P47775 334 aa12.75□□□□□ -0.37
DDX55-212ENST00000544738 HTD2P86397 168 aa12.75□□□□□ -0.37
DDX55-212ENST00000544738 MED22Q15528 200 aa12.75□□□□□ -0.37
DDX55-212ENST00000544738 PNLIPRP3Q17RR3 467 aa12.75□□□□□ -0.37
DDX55-212ENST00000544738 NKAPLQ5M9Q1 402 aa12.75□□□□□ -0.37
DDX55-212ENST00000544738 RBM48Q5RL73 367 aaKnown RBP12.75□□□□□ -0.37
DDX55-212ENST00000544738 LINC00482Q8N8I6 264 aa12.75□□□□□ -0.37
DDX55-212ENST00000544738 GALMQ96C23 342 aa12.75□□□□□ -0.37
DDX55-212ENST00000544738 S1PR3Q99500 378 aa12.75□□□□□ -0.37
DDX55-212ENST00000544738 MCRIP2Q9BUT9 160 aaKnown RBP12.75□□□□□ -0.37
DDX55-212ENST00000544738 PLSCR3Q9NRY6 295 aa12.75□□□□□ -0.37
DDX55-212ENST00000544738 JPT1Q9UK76 154 aa12.75□□□□□ -0.37
DDX55-212ENST00000544738 LSM2Q9Y333 95 aaKnown RBP12.75□□□□□ -0.37
DDX55-212ENST00000544738 NUDT19A8MXV4 375 aa12.74□□□□□ -0.37
DDX55-212ENST00000544738 RRP9O43818 475 aaKnown RBP12.74□□□□□ -0.37
DDX55-212ENST00000544738 HTR2CP28335 458 aa12.74□□□□□ -0.37
DDX55-212ENST00000544738 MYCNOSP40205 109 aa12.74□□□□□ -0.37
DDX55-212ENST00000544738 THBS3P49746 956 aa12.74□□□□□ -0.37
DDX55-212ENST00000544738 GP2P55259 537 aaKnown RBP12.74□□□□□ -0.37
DDX55-212ENST00000544738 RPS27AP62979 156 aaKnown RBP12.74□□□□□ -0.37
DDX55-212ENST00000544738 INSL4Q14641 139 aa12.74□□□□□ -0.37
DDX55-212ENST00000544738 HSD17B12Q53GQ0 312 aa12.74□□□□□ -0.37
DDX55-212ENST00000544738 LY6G6FQ5SQ64 297 aa12.74□□□□□ -0.37
DDX55-212ENST00000544738 CEACAM19Q7Z692 300 aa12.74□□□□□ -0.37
DDX55-212ENST00000544738 LRRTM1Q86UE6 522 aa12.74□□□□□ -0.37
DDX55-212ENST00000544738 MRPL41Q8IXM3 137 aaKnown RBP12.74□□□□□ -0.37
DDX55-212ENST00000544738 MRPL30Q8TCC3 161 aaKnown RBP12.74□□□□□ -0.37
DDX55-212ENST00000544738 TMEM59Q9BXS4 323 aa12.74□□□□□ -0.37
DDX55-212ENST00000544738 TPRKBQ9Y3C4 175 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 185.8 ms