RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 IKZF2Q9UKS7 526 aa7.66□□□□□ -1.18
VPS13D-212ENST00000543766 RIIAD1A6NNX1 92 aa7.66□□□□□ -1.18
VPS13D-212ENST00000543766 H3BUT2 72 aa7.66□□□□□ -1.18
VPS13D-212ENST00000543766 SDCBPO00560 298 aaPredicted RBP7.66□□□□□ -1.18
VPS13D-212ENST00000543766 IGLC1P0CG04 106 aa7.66□□□□□ -1.18
VPS13D-212ENST00000543766 CDK2P24941 298 aa7.66□□□□□ -1.18
VPS13D-212ENST00000543766 WDR31Q8NA23 367 aa7.66□□□□□ -1.18
VPS13D-212ENST00000543766 PGLYRP3Q96LB9 341 aa7.66□□□□□ -1.18
VPS13D-212ENST00000543766 NDC1Q9BTX1 674 aa7.66□□□□□ -1.18
VPS13D-212ENST00000543766 MS4A6AQ9H2W1 248 aa7.66□□□□□ -1.18
VPS13D-212ENST00000543766 PELI2Q9HAT8 420 aa7.66□□□□□ -1.18
VPS13D-212ENST00000543766 PHPT1Q9NRX4 125 aaPredicted RBP7.66□□□□□ -1.18
VPS13D-212ENST00000543766 FEZF1A0PJY2 475 aa7.66□□□□□ -1.18
VPS13D-212ENST00000543766 DIRC3C9JPN6 131 aa7.66□□□□□ -1.18
VPS13D-212ENST00000543766 CT62P0C5K7 136 aa7.66□□□□□ -1.18
VPS13D-212ENST00000543766 ACRV1P26436 265 aa7.66□□□□□ -1.18
VPS13D-212ENST00000543766 TSPOP30536 169 aa7.66□□□□□ -1.18
VPS13D-212ENST00000543766 ELOBQ15370 118 aa7.66□□□□□ -1.18
VPS13D-212ENST00000543766 CSRP2Q16527 193 aa7.66□□□□□ -1.18
VPS13D-212ENST00000543766 ASTLQ6HA08 431 aaPredicted RBP7.66□□□□□ -1.18
VPS13D-212ENST00000543766 DGAT2L7PQ6IED9 249 aa7.66□□□□□ -1.18
VPS13D-212ENST00000543766 ZNF880Q6PDB4 577 aa7.66□□□□□ -1.18
VPS13D-212ENST00000543766 OPN5Q6U736 354 aa7.66□□□□□ -1.18
VPS13D-212ENST00000543766 TMEM184AQ6ZMB5 413 aa7.66□□□□□ -1.18
VPS13D-212ENST00000543766 GLDNQ6ZMI3 551 aaPredicted RBP7.66□□□□□ -1.18
VPS13D-212ENST00000543766 RBMXL3Q8N7X1 1067 aaKnown RBP7.66□□□□□ -1.18
VPS13D-212ENST00000543766 OR5AP2Q8NGF4 316 aa7.66□□□□□ -1.18
VPS13D-212ENST00000543766 OR2K2Q8NGT1 345 aa7.66□□□□□ -1.18
VPS13D-212ENST00000543766 NEIL2Q969S2 332 aa7.66□□□□□ -1.18
VPS13D-212ENST00000543766 SCARF2Q96GP6 870 aaPredicted RBP7.66□□□□□ -1.18
VPS13D-212ENST00000543766 LRRC61Q9BV99 259 aa7.66□□□□□ -1.18
VPS13D-212ENST00000543766 TRGV10A0A0A0MS01 117 aa7.65□□□□□ -1.18
VPS13D-212ENST00000543766 A0A0G2JK05 382 aa7.65□□□□□ -1.18
VPS13D-212ENST00000543766 TMEM213A2RRL7 107 aa7.65□□□□□ -1.18
VPS13D-212ENST00000543766 GRIFINA4D1Z8 144 aa7.65□□□□□ -1.18
VPS13D-212ENST00000543766 FAM90A18PA6NE21 464 aa7.65□□□□□ -1.18
VPS13D-212ENST00000543766 FAM90A16PA6NEW6 464 aa7.65□□□□□ -1.18
VPS13D-212ENST00000543766 FAM90A9PA6NNJ1 464 aa7.65□□□□□ -1.18
VPS13D-212ENST00000543766 FAM90A5PA8MXJ8 464 aa7.65□□□□□ -1.18
VPS13D-212ENST00000543766 HYPMO75409 117 aa7.65□□□□□ -1.18
VPS13D-212ENST00000543766 STC2O76061 302 aa7.65□□□□□ -1.18
VPS13D-212ENST00000543766 WNT1P04628 370 aa7.65□□□□□ -1.18
VPS13D-212ENST00000543766 FAM90A15PP0C7V4 464 aa7.65□□□□□ -1.18
VPS13D-212ENST00000543766 FAM90A14PP0C7W9 464 aa7.65□□□□□ -1.18
VPS13D-212ENST00000543766 SMIM17P0DL12 118 aa7.65□□□□□ -1.18
VPS13D-212ENST00000543766 MTCP1P56278 107 aa7.65□□□□□ -1.18
VPS13D-212ENST00000543766 FAM162BQ5T6X4 162 aa7.65□□□□□ -1.18
VPS13D-212ENST00000543766 OR4X1Q8NH49 305 aa7.65□□□□□ -1.18
VPS13D-212ENST00000543766 S100A16Q96FQ6 103 aaKnown RBP7.65□□□□□ -1.18
VPS13D-212ENST00000543766 SLC25A39Q9BZJ4 359 aaPredicted RBP7.65□□□□□ -1.18
VPS13D-212ENST00000543766 WDR13Q9H1Z4 485 aa7.65□□□□□ -1.18
VPS13D-212ENST00000543766 KCNE5Q9UJ90 142 aa7.65□□□□□ -1.18
VPS13D-212ENST00000543766 FUT9Q9Y231 359 aa7.65□□□□□ -1.18
VPS13D-212ENST00000543766 TRAV36DV7A0A075B6V5 113 aa7.65□□□□□ -1.18
VPS13D-212ENST00000543766 RHODO00212 210 aa7.65□□□□□ -1.18
VPS13D-212ENST00000543766 ZNF217O75362 1048 aa7.65□□□□□ -1.18
VPS13D-212ENST00000543766 MT-CO3P00414 261 aa7.65□□□□□ -1.18
VPS13D-212ENST00000543766 GASTP01350 101 aa7.65□□□□□ -1.18
VPS13D-212ENST00000543766 CXCL10P02778 98 aa7.65□□□□□ -1.18
VPS13D-212ENST00000543766 COL8A1P27658 744 aa7.65□□□□□ -1.18
VPS13D-212ENST00000543766 LY6KQ17RY6 165 aa7.65□□□□□ -1.18
VPS13D-212ENST00000543766 ZNF626Q68DY1 528 aa7.65□□□□□ -1.18
VPS13D-212ENST00000543766 HBMQ6B0K9 141 aa7.65□□□□□ -1.18
VPS13D-212ENST00000543766 DOCK4Q8N1I0 1966 aa7.65□□□□□ -1.18
VPS13D-212ENST00000543766 GALNT16Q8N428 558 aa7.65□□□□□ -1.18
VPS13D-212ENST00000543766 RYBPQ8N488 228 aaPredicted RBP7.65□□□□□ -1.18
VPS13D-212ENST00000543766 C16orf52Q8NHV5 167 aa7.65□□□□□ -1.18
VPS13D-212ENST00000543766 PP6455Q8WZ26 134 aa7.65□□□□□ -1.18
VPS13D-212ENST00000543766 MRPL53Q96EL3 112 aaKnown RBP7.65□□□□□ -1.18
VPS13D-212ENST00000543766 IMP4Q96G21 291 aaKnown RBP7.65□□□□□ -1.18
VPS13D-212ENST00000543766 SIGLEC12Q96PQ1 595 aa7.65□□□□□ -1.18
VPS13D-212ENST00000543766 RASL10BQ96S79 203 aa7.65□□□□□ -1.18
VPS13D-212ENST00000543766 SLC25A21Q9BQT8 299 aaPredicted RBP7.65□□□□□ -1.18
VPS13D-212ENST00000543766 ZNF443Q9Y2A4 671 aaPredicted RBP7.65□□□□□ -1.18
VPS13D-212ENST00000543766 PLXND1Q9Y4D7 1925 aa7.65□□□□□ -1.18
VPS13D-212ENST00000543766 UNC80Q8N2C7 3258 aa7.65□□□□□ -1.19
VPS13D-212ENST00000543766 LILRA5A6NI73 299 aa7.65□□□□□ -1.19
VPS13D-212ENST00000543766 FAM90A20PA6NIJ5 464 aa7.65□□□□□ -1.19
VPS13D-212ENST00000543766 CRYAAP02489 173 aa7.65□□□□□ -1.19
VPS13D-212ENST00000543766 PSMB1P20618 241 aaKnown RBP7.65□□□□□ -1.19
VPS13D-212ENST00000543766 CCKBRP32239 447 aa7.65□□□□□ -1.19
VPS13D-212ENST00000543766 STC1P52823 247 aa7.65□□□□□ -1.19
VPS13D-212ENST00000543766 MVDP53602 400 aa7.65□□□□□ -1.19
VPS13D-212ENST00000543766 CDK3Q00526 305 aa7.65□□□□□ -1.19
VPS13D-212ENST00000543766 SP4Q02446 784 aa7.65□□□□□ -1.19
VPS13D-212ENST00000543766 CD69Q07108 199 aa7.65□□□□□ -1.19
VPS13D-212ENST00000543766 IZUMO4Q1ZYL8 232 aa7.65□□□□□ -1.19
VPS13D-212ENST00000543766 FAM159AQ6UWV7 190 aa7.65□□□□□ -1.19
VPS13D-212ENST00000543766 IL22RA1Q8N6P7 574 aa7.65□□□□□ -1.19
VPS13D-212ENST00000543766 ZFP62Q8NB50 900 aaPredicted RBP7.65□□□□□ -1.19
VPS13D-212ENST00000543766 OR52E2Q8NGJ4 325 aa7.65□□□□□ -1.19
VPS13D-212ENST00000543766 OR13A1Q8NGR1 328 aa7.65□□□□□ -1.19
VPS13D-212ENST00000543766 HES7Q9BYE0 225 aa7.65□□□□□ -1.19
VPS13D-212ENST00000543766 R3HDMLQ9H3Y0 253 aa7.65□□□□□ -1.19
VPS13D-212ENST00000543766 DNAJC27Q9NZQ0 273 aa7.65□□□□□ -1.19
VPS13D-212ENST00000543766 SPCS1Q9Y6A9 102 aa7.65□□□□□ -1.19
VPS13D-212ENST00000543766 MTCL1Q9Y4B5 1905 aaKnown RBP7.64□□□□□ -1.19
VPS13D-212ENST00000543766 FAM231BA6NCW3 169 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 H0YL77 283 aa7.64□□□□□ -1.19
VPS13D-212ENST00000543766 GAPDHSO14556 408 aaPredicted RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms