RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 FZR1Q9UM11 496 aa12.58□□□□□ -0.4
DDX55-209ENST00000542286 SLC22A20A6NK97 555 aa12.57□□□□□ -0.4
DDX55-209ENST00000542286 IFNA10P01566 189 aa12.57□□□□□ -0.4
DDX55-209ENST00000542286 TMEM211Q6ICI0 200 aa12.57□□□□□ -0.4
DDX55-209ENST00000542286 P4HA3Q7Z4N8 544 aa12.57□□□□□ -0.4
DDX55-209ENST00000542286 WDR86Q86TI4 376 aa12.57□□□□□ -0.4
DDX55-209ENST00000542286 OR2J1Q9GZK6 312 aa12.57□□□□□ -0.4
DDX55-209ENST00000542286 UBE2J1Q9Y385 318 aaPredicted RBP12.57□□□□□ -0.4
DDX55-209ENST00000542286 ANKRD11Q6UB99 2663 aaPredicted RBP12.57□□□□□ -0.4
DDX55-209ENST00000542286 HEATR1Q9H583 2144 aaKnown RBP12.57□□□□□ -0.4
DDX55-209ENST00000542286 TRAV24A0A0B4J272 114 aa12.57□□□□□ -0.4
DDX55-209ENST00000542286 SIRPB1O00241 398 aa12.57□□□□□ -0.4
DDX55-209ENST00000542286 AGFG2O95081 481 aa12.57□□□□□ -0.4
DDX55-209ENST00000542286 FABP4P15090 132 aa12.57□□□□□ -0.4
DDX55-209ENST00000542286 APLNRP35414 380 aa12.57□□□□□ -0.4
DDX55-209ENST00000542286 OR51H1Q8NH63 302 aa12.57□□□□□ -0.4
DDX55-209ENST00000542286 RBM14Q96PK6 669 aaKnown RBP12.57□□□□□ -0.4
DDX55-209ENST00000542286 HIST1H2AAQ96QV6 131 aa12.57□□□□□ -0.4
DDX55-209ENST00000542286 ARV1Q9H2C2 271 aa12.57□□□□□ -0.4
DDX55-209ENST00000542286 OR1A1Q9P1Q5 309 aa12.57□□□□□ -0.4
DDX55-209ENST00000542286 TRGV5A0A0B4J1U4 118 aa12.56□□□□□ -0.4
DDX55-209ENST00000542286 H0YL77 283 aa12.56□□□□□ -0.4
DDX55-209ENST00000542286 KLRC4-KLRK1H3BQV0 150 aa12.56□□□□□ -0.4
DDX55-209ENST00000542286 ADAM20O43506 726 aa12.56□□□□□ -0.4
DDX55-209ENST00000542286 SSSCA1O60232 199 aa12.56□□□□□ -0.4
DDX55-209ENST00000542286 NAPSAO96009 420 aa12.56□□□□□ -0.4
DDX55-209ENST00000542286 EPHA1P21709 976 aa12.56□□□□□ -0.4
DDX55-209ENST00000542286 PPP1CCP36873 323 aaKnown RBP12.56□□□□□ -0.4
DDX55-209ENST00000542286 ELOBQ15370 118 aa12.56□□□□□ -0.4
DDX55-209ENST00000542286 MKXQ8IYA7 352 aa12.56□□□□□ -0.4
DDX55-209ENST00000542286 OR1K1Q8NGR3 316 aa12.56□□□□□ -0.4
DDX55-209ENST00000542286 OR5P3Q8WZ94 311 aa12.56□□□□□ -0.4
DDX55-209ENST00000542286 C2orf88Q9BSF0 95 aa12.56□□□□□ -0.4
DDX55-209ENST00000542286 ABHD14AQ9BUJ0 271 aa12.56□□□□□ -0.4
DDX55-209ENST00000542286 SUCNR1Q9BXA5 334 aa12.56□□□□□ -0.4
DDX55-209ENST00000542286 TMED3Q9Y3Q3 217 aa12.56□□□□□ -0.4
DDX55-209ENST00000542286 USF3Q68DE3 2245 aa12.56□□□□□ -0.4
DDX55-209ENST00000542286 OR5H1A6NKK0 313 aa12.56□□□□□ -0.4
DDX55-209ENST00000542286 H3BP45 60 aa12.56□□□□□ -0.4
DDX55-209ENST00000542286 TAGLN2P37802 199 aaKnown RBP12.56□□□□□ -0.4
DDX55-209ENST00000542286 PLA2G5P39877 138 aa12.56□□□□□ -0.4
DDX55-209ENST00000542286 SOX8P57073 446 aa12.56□□□□□ -0.4
DDX55-209ENST00000542286 NKX6-1P78426 367 aaPredicted RBP12.56□□□□□ -0.4
DDX55-209ENST00000542286 DPPA2Q7Z7J5 298 aa12.56□□□□□ -0.4
DDX55-209ENST00000542286 TGIF2LXQ8IUE1 241 aa12.56□□□□□ -0.4
DDX55-209ENST00000542286 LGI3Q8N145 548 aa12.56□□□□□ -0.4
DDX55-209ENST00000542286 TMEM217Q8N7C4 229 aa12.56□□□□□ -0.4
DDX55-209ENST00000542286 DEFB124Q8NES8 71 aa12.56□□□□□ -0.4
DDX55-209ENST00000542286 TMEM9BQ9NQ34 198 aa12.56□□□□□ -0.4
DDX55-209ENST00000542286 KLF13Q9Y2Y9 288 aaPredicted RBP12.56□□□□□ -0.4
DDX55-209ENST00000542286 BORCS7-ASMTA0A0B4J1R7 106 aa12.55□□□□□ -0.4
DDX55-209ENST00000542286 PROB1E7EW31 1015 aa12.55□□□□□ -0.4
DDX55-209ENST00000542286 TCAPO15273 167 aa12.55□□□□□ -0.4
DDX55-209ENST00000542286 CST7O76096 145 aa12.55□□□□□ -0.4
DDX55-209ENST00000542286 TRGC2P03986 189 aa12.55□□□□□ -0.4
DDX55-209ENST00000542286 ECI1P42126 302 aa12.55□□□□□ -0.4
DDX55-209ENST00000542286 TRIP6Q15654 476 aaKnown RBP12.55□□□□□ -0.4
DDX55-209ENST00000542286 ZFP62Q8NB50 900 aaPredicted RBP12.55□□□□□ -0.4
DDX55-209ENST00000542286 RAB39BQ96DA2 213 aa12.55□□□□□ -0.4
DDX55-209ENST00000542286 NEU1Q99519 415 aa12.55□□□□□ -0.4
DDX55-209ENST00000542286 RELNP78509 3460 aa12.55□□□□□ -0.4
DDX55-209ENST00000542286 A0A0G2JRQ6 117 aa12.55□□□□□ -0.4
DDX55-209ENST00000542286 ANKRD30BLA7E2S9 258 aa12.55□□□□□ -0.4
DDX55-209ENST00000542286 ZNF724A8MTY0 619 aa12.55□□□□□ -0.4
DDX55-209ENST00000542286 H3BQ15 152 aa12.55□□□□□ -0.4
DDX55-209ENST00000542286 TK1P04183 234 aa12.55□□□□□ -0.4
DDX55-209ENST00000542286 CD46P15529 392 aa12.55□□□□□ -0.4
DDX55-209ENST00000542286 CEBPGP53567 150 aa12.55□□□□□ -0.4
DDX55-209ENST00000542286 CASP6P55212 293 aa12.55□□□□□ -0.4
DDX55-209ENST00000542286 ERVFRD-1P60508 538 aa12.55□□□□□ -0.4
DDX55-209ENST00000542286 USF2Q15853 346 aaPredicted RBP12.55□□□□□ -0.4
DDX55-209ENST00000542286 CNEP1R1Q8N9A8 125 aa12.55□□□□□ -0.4
DDX55-209ENST00000542286 MRPL30Q8TCC3 161 aaKnown RBP12.55□□□□□ -0.4
DDX55-209ENST00000542286 PLEKHA2Q9HB19 425 aa12.55□□□□□ -0.4
DDX55-209ENST00000542286 BSNQ9UPA5 3926 aa12.55□□□□□ -0.4
DDX55-209ENST00000542286 DOCK11Q5JSL3 2073 aa12.54□□□□□ -0.4
DDX55-209ENST00000542286 TGIF2-C20orf24A0A0A6YYL0 155 aa12.54□□□□□ -0.4
DDX55-209ENST00000542286 CDIPTO14735 213 aa12.54□□□□□ -0.4
DDX55-209ENST00000542286 SS18L1O75177 396 aaPredicted RBP12.54□□□□□ -0.4
DDX55-209ENST00000542286 TMEM50AO95807 157 aa12.54□□□□□ -0.4
DDX55-209ENST00000542286 LMO1P25800 156 aa12.54□□□□□ -0.4
DDX55-209ENST00000542286 DNLZQ5SXM8 178 aa12.54□□□□□ -0.4
DDX55-209ENST00000542286 FBXW9Q5XUX1 488 aa12.54□□□□□ -0.4
DDX55-209ENST00000542286 ZNF695Q8IW36 515 aa12.54□□□□□ -0.4
DDX55-209ENST00000542286 FDCSPQ8NFU4 85 aa12.54□□□□□ -0.4
DDX55-209ENST00000542286 FAM213BQ8TBF2 198 aa12.54□□□□□ -0.4
DDX55-209ENST00000542286 BCL2L2Q92843 193 aaPredicted RBP12.54□□□□□ -0.4
DDX55-209ENST00000542286 TMEM68Q96MH6 324 aa12.54□□□□□ -0.4
DDX55-209ENST00000542286 SYT3Q9BQG1 590 aa12.54□□□□□ -0.4
DDX55-209ENST00000542286 GINS3Q9BRX5 216 aa12.54□□□□□ -0.4
DDX55-209ENST00000542286 PCNX1Q96RV3 2341 aa12.54□□□□□ -0.4
DDX55-209ENST00000542286 E5RGE8 158 aa12.54□□□□□ -0.4
DDX55-209ENST00000542286 CYB5BO43169 146 aa12.54□□□□□ -0.4
DDX55-209ENST00000542286 GRPP07492 148 aa12.54□□□□□ -0.4
DDX55-209ENST00000542286 ARR3P36575 388 aa12.54□□□□□ -0.4
DDX55-209ENST00000542286 CD81P60033 236 aa12.54□□□□□ -0.4
DDX55-209ENST00000542286 LBHQ53QV2 105 aaPredicted RBP12.54□□□□□ -0.4
DDX55-209ENST00000542286 ZNF826PQ6ZT77 177 aa12.54□□□□□ -0.4
DDX55-209ENST00000542286 TMEM222Q9H0R3 208 aa12.54□□□□□ -0.4
DDX55-209ENST00000542286 NSG2Q9Y328 171 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms