RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 TMEM11P17152 192 aa9.76□□□□□ -0.85
CAPN1-223ENST00000533079 FSTP19883 344 aa9.76□□□□□ -0.85
CAPN1-223ENST00000533079 PTGFRP43088 359 aa9.76□□□□□ -0.85
CAPN1-223ENST00000533079 FOXE3Q13461 319 aa9.76□□□□□ -0.85
CAPN1-223ENST00000533079 ZNF146Q15072 292 aa9.76□□□□□ -0.85
CAPN1-223ENST00000533079 CXorf66Q5JRM2 361 aaPredicted RBP9.76□□□□□ -0.85
CAPN1-223ENST00000533079 Q6ZNX1 250 aa9.76□□□□□ -0.85
CAPN1-223ENST00000533079 LRRTM1Q86UE6 522 aa9.76□□□□□ -0.85
CAPN1-223ENST00000533079 LAX1Q8IWV1 398 aa9.76□□□□□ -0.85
CAPN1-223ENST00000533079 OR52N4Q8NGI2 321 aa9.76□□□□□ -0.85
CAPN1-223ENST00000533079 C4orf3Q8WVX3 66 aa9.76□□□□□ -0.85
CAPN1-223ENST00000533079 CORO2AQ92828 525 aa9.76□□□□□ -0.85
CAPN1-223ENST00000533079 TMEM106AQ96A25 262 aa9.76□□□□□ -0.85
CAPN1-223ENST00000533079 RPEQ96AT9 228 aa9.76□□□□□ -0.85
CAPN1-223ENST00000533079 DIRAS2Q96HU8 199 aa9.76□□□□□ -0.85
CAPN1-223ENST00000533079 CHST6Q9GZX3 395 aa9.76□□□□□ -0.85
CAPN1-223ENST00000533079 PLEKHA1Q9HB21 404 aa9.76□□□□□ -0.85
CAPN1-223ENST00000533079 SPATA2Q9UM82 520 aa9.76□□□□□ -0.85
CAPN1-223ENST00000533079 V9GY05 133 aa9.76□□□□□ -0.85
CAPN1-223ENST00000533079 IFITM5A6NNB3 132 aa9.75□□□□□ -0.85
CAPN1-223ENST00000533079 LY86O95711 162 aa9.75□□□□□ -0.85
CAPN1-223ENST00000533079 APOA1P02647 267 aa9.75□□□□□ -0.85
CAPN1-223ENST00000533079 ELANEP08246 267 aa9.75□□□□□ -0.85
CAPN1-223ENST00000533079 CALCBP10092 127 aa9.75□□□□□ -0.85
CAPN1-223ENST00000533079 IGFBP3P17936 291 aaPredicted RBP9.75□□□□□ -0.85
CAPN1-223ENST00000533079 CCL1P22362 96 aa9.75□□□□□ -0.85
CAPN1-223ENST00000533079 OR3A1P47881 315 aa9.75□□□□□ -0.85
CAPN1-223ENST00000533079 MFGE8Q08431 387 aaPredicted RBP9.75□□□□□ -0.85
CAPN1-223ENST00000533079 PNLIPRP3Q17RR3 467 aa9.75□□□□□ -0.85
CAPN1-223ENST00000533079 RGS21Q2M5E4 152 aa9.75□□□□□ -0.85
CAPN1-223ENST00000533079 DEFB136Q30KP8 78 aa9.75□□□□□ -0.85
CAPN1-223ENST00000533079 ZNF260Q3ZCT1 412 aa9.75□□□□□ -0.85
CAPN1-223ENST00000533079 IDNKQ5T6J7 187 aa9.75□□□□□ -0.85
CAPN1-223ENST00000533079 BCL2L15Q5TBC7 163 aa9.75□□□□□ -0.85
CAPN1-223ENST00000533079 LCNL1Q6ZST4 164 aa9.75□□□□□ -0.85
CAPN1-223ENST00000533079 CDH26Q8IXH8 852 aa9.75□□□□□ -0.85
CAPN1-223ENST00000533079 RDH10Q8IZV5 341 aa9.75□□□□□ -0.85
CAPN1-223ENST00000533079 OR4D6Q8NGJ1 314 aa9.75□□□□□ -0.85
CAPN1-223ENST00000533079 OR14K1Q8NGZ2 314 aa9.75□□□□□ -0.85
CAPN1-223ENST00000533079 SLAMF9Q96A28 289 aa9.75□□□□□ -0.85
CAPN1-223ENST00000533079 COMMD3Q9UBI1 195 aa9.75□□□□□ -0.85
CAPN1-223ENST00000533079 DHDHQ9UQ10 334 aa9.75□□□□□ -0.85
CAPN1-223ENST00000533079 FAM230AA0A1W2PPH8 454 aa9.74□□□□□ -0.85
CAPN1-223ENST00000533079 A0A1W2PPK0 400 aa9.74□□□□□ -0.85
CAPN1-223ENST00000533079 F8VVB4 439 aa9.74□□□□□ -0.85
CAPN1-223ENST00000533079 F8VWA3 439 aa9.74□□□□□ -0.85
CAPN1-223ENST00000533079 JTBO76095 146 aa9.74□□□□□ -0.85
CAPN1-223ENST00000533079 CYB5AP00167 134 aa9.74□□□□□ -0.85
CAPN1-223ENST00000533079 RPLP1P05386 114 aaKnown RBP9.74□□□□□ -0.85
CAPN1-223ENST00000533079 CSN2P05814 226 aa9.74□□□□□ -0.85
CAPN1-223ENST00000533079 ATF1P18846 271 aa9.74□□□□□ -0.85
CAPN1-223ENST00000533079 RAB7AP51149 207 aa9.74□□□□□ -0.85
CAPN1-223ENST00000533079 FUT6P51993 359 aa9.74□□□□□ -0.85
CAPN1-223ENST00000533079 OR10A3P58181 314 aa9.74□□□□□ -0.85
CAPN1-223ENST00000533079 IFITM3Q01628 133 aa9.74□□□□□ -0.85
CAPN1-223ENST00000533079 HES1Q14469 280 aa9.74□□□□□ -0.85
CAPN1-223ENST00000533079 RBM39Q14498 530 aaKnown RBP9.74□□□□□ -0.85
CAPN1-223ENST00000533079 OXA1LQ15070 435 aa9.74□□□□□ -0.85
CAPN1-223ENST00000533079 BAIAP2L2Q6UXY1 529 aa9.74□□□□□ -0.85
CAPN1-223ENST00000533079 OR8H3Q8N146 312 aa9.74□□□□□ -0.85
CAPN1-223ENST00000533079 OR56B4Q8NH76 319 aa9.74□□□□□ -0.85
CAPN1-223ENST00000533079 OR9G1Q8NH87 305 aa9.74□□□□□ -0.85
CAPN1-223ENST00000533079 SETD6Q8TBK2 473 aa9.74□□□□□ -0.85
CAPN1-223ENST00000533079 TRMT10AQ8TBZ6 339 aaKnown RBP9.74□□□□□ -0.85
CAPN1-223ENST00000533079 SDHCQ99643 169 aaPredicted RBP9.74□□□□□ -0.85
CAPN1-223ENST00000533079 SRRQ9GZT4 340 aa9.74□□□□□ -0.85
CAPN1-223ENST00000533079 CKLFQ9UBR5 152 aa9.74□□□□□ -0.85
CAPN1-223ENST00000533079 DAPK2Q9UIK4 370 aa9.74□□□□□ -0.85
CAPN1-223ENST00000533079 AK6Q9Y3D8 172 aaKnown RBP9.74□□□□□ -0.85
CAPN1-223ENST00000533079 ETV7Q9Y603 341 aa9.74□□□□□ -0.85
CAPN1-223ENST00000533079 A0A1B0GTI1 187 aa9.73□□□□□ -0.85
CAPN1-223ENST00000533079 A0A1W2PPI3 338 aa9.73□□□□□ -0.85
CAPN1-223ENST00000533079 FAM172BPA6NC97 362 aa9.73□□□□□ -0.85
CAPN1-223ENST00000533079 ZNF729A6NN14 1252 aaPredicted RBP9.73□□□□□ -0.85
CAPN1-223ENST00000533079 HPGDSO60760 199 aa9.73□□□□□ -0.85
CAPN1-223ENST00000533079 OR8U8P0C7N1 319 aa9.73□□□□□ -0.85
CAPN1-223ENST00000533079 FRMD6-AS1P0C7T7 363 aa9.73□□□□□ -0.85
CAPN1-223ENST00000533079 SOX2P48431 317 aa9.73□□□□□ -0.85
CAPN1-223ENST00000533079 ZNF79Q15937 498 aa9.73□□□□□ -0.85
CAPN1-223ENST00000533079 ZFAND6Q6FIF0 208 aa9.73□□□□□ -0.85
CAPN1-223ENST00000533079 ZNF529Q6P280 563 aa9.73□□□□□ -0.85
CAPN1-223ENST00000533079 CNIH2Q6PI25 160 aa9.73□□□□□ -0.85
CAPN1-223ENST00000533079 SLC25A26Q70HW3 274 aa9.73□□□□□ -0.85
CAPN1-223ENST00000533079 ZNF429Q86V71 674 aa9.73□□□□□ -0.85
CAPN1-223ENST00000533079 LYSMD2Q8IV50 215 aa9.73□□□□□ -0.85
CAPN1-223ENST00000533079 SERPINA12Q8IW75 414 aa9.73□□□□□ -0.85
CAPN1-223ENST00000533079 OR10AC1Q8NH08 325 aa9.73□□□□□ -0.85
CAPN1-223ENST00000533079 TSEN15Q8WW01 171 aaKnown RBP9.73□□□□□ -0.85
CAPN1-223ENST00000533079 C10orf35Q96D05 121 aa9.73□□□□□ -0.85
CAPN1-223ENST00000533079 BORCS8Q96FH0 119 aa9.73□□□□□ -0.85
CAPN1-223ENST00000533079 GFI1Q99684 422 aa9.73□□□□□ -0.85
CAPN1-223ENST00000533079 TM2D3Q9BRN9 247 aa9.73□□□□□ -0.85
CAPN1-223ENST00000533079 KRTAP17-1Q9BYP8 105 aa9.73□□□□□ -0.85
CAPN1-223ENST00000533079 CHST5Q9GZS9 411 aa9.73□□□□□ -0.85
CAPN1-223ENST00000533079 ABCG5Q9H222 651 aa9.73□□□□□ -0.85
CAPN1-223ENST00000533079 LIN7CQ9NUP9 197 aaKnown RBP9.73□□□□□ -0.85
CAPN1-223ENST00000533079 LINC00527Q9UJ94 153 aa9.73□□□□□ -0.85
CAPN1-223ENST00000533079 GTF2A1LQ9UNN4 478 aa9.73□□□□□ -0.85
CAPN1-223ENST00000533079 IGKV1-27A0A075B6S5 117 aa9.72□□□□□ -0.85
CAPN1-223ENST00000533079 LOC107986453A0A1B0GWG9 222 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms