RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 OR2S2Q9NQN1 319 aa14□□□□□ -0.17
PCF11-206ENST00000533018 ZMAT5Q9UDW3 170 aaKnown RBP14□□□□□ -0.17
PCF11-206ENST00000533018 NBEAL2Q6ZNJ1 2754 aa14□□□□□ -0.17
PCF11-206ENST00000533018 SLC2A2P11168 524 aaPredicted RBP13.99□□□□□ -0.17
PCF11-206ENST00000533018 ADARB1P78563 741 aaKnown RBP13.99□□□□□ -0.17
PCF11-206ENST00000533018 DEFB136Q30KP8 78 aa13.99□□□□□ -0.17
PCF11-206ENST00000533018 TMEM30BQ3MIR4 351 aa13.99□□□□□ -0.17
PCF11-206ENST00000533018 ZNF485Q8NCK3 441 aa13.99□□□□□ -0.17
PCF11-206ENST00000533018 ZNF439Q8NDP4 499 aa13.99□□□□□ -0.17
PCF11-206ENST00000533018 OR8U1Q8NH10 309 aa13.99□□□□□ -0.17
PCF11-206ENST00000533018 DERL3Q96Q80 235 aa13.99□□□□□ -0.17
PCF11-206ENST00000533018 HSPB9Q9BQS6 159 aa13.99□□□□□ -0.17
PCF11-206ENST00000533018 TAF9BQ9HBM6 251 aa13.99□□□□□ -0.17
PCF11-206ENST00000533018 FAM90A10PA6NDY2 464 aa13.98□□□□□ -0.17
PCF11-206ENST00000533018 FAM90A7PA6NKC0 464 aa13.98□□□□□ -0.17
PCF11-206ENST00000533018 FAM90A23PA8MXZ1 464 aa13.98□□□□□ -0.17
PCF11-206ENST00000533018 CA11O75493 328 aa13.98□□□□□ -0.17
PCF11-206ENST00000533018 ELANEP08246 267 aa13.98□□□□□ -0.17
PCF11-206ENST00000533018 MYF6P23409 242 aa13.98□□□□□ -0.17
PCF11-206ENST00000533018 MAPK3P27361 379 aaPredicted RBP13.98□□□□□ -0.17
PCF11-206ENST00000533018 WNT4P56705 351 aa13.98□□□□□ -0.17
PCF11-206ENST00000533018 DGCR2P98153 550 aa13.98□□□□□ -0.17
PCF11-206ENST00000533018 FOXE3Q13461 319 aa13.98□□□□□ -0.17
PCF11-206ENST00000533018 NKAPLQ5M9Q1 402 aa13.98□□□□□ -0.17
PCF11-206ENST00000533018 AHSA2Q719I0 299 aa13.98□□□□□ -0.17
PCF11-206ENST00000533018 CDH26Q8IXH8 852 aa13.98□□□□□ -0.17
PCF11-206ENST00000533018 C8orf59Q8N0T1 100 aaPredicted RBP13.98□□□□□ -0.17
PCF11-206ENST00000533018 PACRGLQ8N7B6 248 aa13.98□□□□□ -0.17
PCF11-206ENST00000533018 NKAIN3Q8N8D7 197 aa13.98□□□□□ -0.17
PCF11-206ENST00000533018 BPIFB6Q8NFQ5 453 aa13.98□□□□□ -0.17
PCF11-206ENST00000533018 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.98□□□□□ -0.17
PCF11-206ENST00000533018 C8orf4Q9NR00 106 aa13.98□□□□□ -0.17
PCF11-206ENST00000533018 KMT2CQ8NEZ4 4911 aaKnown RBP13.98□□□□□ -0.17
PCF11-206ENST00000533018 H0YHG0 523 aa13.97□□□□□ -0.17
PCF11-206ENST00000533018 PPP1CCP36873 323 aaKnown RBP13.97□□□□□ -0.17
PCF11-206ENST00000533018 CDX1P47902 265 aaPredicted RBP13.97□□□□□ -0.17
PCF11-206ENST00000533018 ZNF137PP52743 207 aa13.97□□□□□ -0.17
PCF11-206ENST00000533018 GP2P55259 537 aaKnown RBP13.97□□□□□ -0.17
PCF11-206ENST00000533018 MMDQ15546 238 aa13.97□□□□□ -0.17
PCF11-206ENST00000533018 MORN2Q502X0 79 aa13.97□□□□□ -0.17
PCF11-206ENST00000533018 STEAP3Q658P3 488 aa13.97□□□□□ -0.17
PCF11-206ENST00000533018 FAM71E2Q8N5Q1 922 aa13.97□□□□□ -0.17
PCF11-206ENST00000533018 OR52L2PQ8NGH6 319 aa13.97□□□□□ -0.17
PCF11-206ENST00000533018 OR5M8Q8NGP6 311 aa13.97□□□□□ -0.17
PCF11-206ENST00000533018 THRSPQ92748 146 aa13.97□□□□□ -0.17
PCF11-206ENST00000533018 Q96M66 194 aa13.97□□□□□ -0.17
PCF11-206ENST00000533018 B9D2Q9BPU9 175 aa13.97□□□□□ -0.17
PCF11-206ENST00000533018 UQCC2Q9BRT2 126 aa13.97□□□□□ -0.17
PCF11-206ENST00000533018 CST11Q9H112 138 aa13.97□□□□□ -0.17
PCF11-206ENST00000533018 CNOT2Q9NZN8 540 aaKnown RBP13.97□□□□□ -0.17
PCF11-206ENST00000533018 ZNF107Q9UII5 783 aaPredicted RBP13.97□□□□□ -0.17
PCF11-206ENST00000533018 PDCD6O75340 191 aa13.96□□□□□ -0.17
PCF11-206ENST00000533018 SC5DO75845 299 aa13.96□□□□□ -0.17
PCF11-206ENST00000533018 GLAP06280 429 aa13.96□□□□□ -0.17
PCF11-206ENST00000533018 GNAO1P09471 354 aa13.96□□□□□ -0.17
PCF11-206ENST00000533018 LSAMPQ13449 338 aa13.96□□□□□ -0.17
PCF11-206ENST00000533018 DCTN2Q13561 401 aaKnown RBP13.96□□□□□ -0.17
PCF11-206ENST00000533018 GNMTQ14749 295 aa13.96□□□□□ -0.17
PCF11-206ENST00000533018 KIR2DS1Q14954 304 aa13.96□□□□□ -0.17
PCF11-206ENST00000533018 RCN1Q15293 331 aa13.96□□□□□ -0.17
PCF11-206ENST00000533018 C5orf24Q7Z6I8 188 aa13.96□□□□□ -0.17
PCF11-206ENST00000533018 GAPTQ8N292 157 aa13.96□□□□□ -0.17
PCF11-206ENST00000533018 CYYR1Q96J86 154 aa13.96□□□□□ -0.17
PCF11-206ENST00000533018 KCTD7Q96MP8 289 aa13.96□□□□□ -0.17
PCF11-206ENST00000533018 NEDD4LQ96PU5 975 aa13.96□□□□□ -0.17
PCF11-206ENST00000533018 ABHD14AQ9BUJ0 271 aa13.96□□□□□ -0.17
PCF11-206ENST00000533018 PSORS1C1Q9UIG5 152 aa13.96□□□□□ -0.17
PCF11-206ENST00000533018 ERGIC3Q9Y282 383 aa13.96□□□□□ -0.17
PCF11-206ENST00000533018 TENM3Q9P273 2699 aa13.96□□□□□ -0.18
PCF11-206ENST00000533018 LANCL1O43813 399 aa13.95□□□□□ -0.18
PCF11-206ENST00000533018 LUMP51884 338 aaPredicted RBP13.95□□□□□ -0.18
PCF11-206ENST00000533018 SIGIRRQ6IA17 410 aa13.95□□□□□ -0.18
PCF11-206ENST00000533018 TMEM65Q6PI78 240 aa13.95□□□□□ -0.18
PCF11-206ENST00000533018 MRPL30Q8TCC3 161 aaKnown RBP13.95□□□□□ -0.18
PCF11-206ENST00000533018 ZNF251Q9BRH9 671 aa13.95□□□□□ -0.18
PCF11-206ENST00000533018 GHRLQ9UBU3 117 aa13.95□□□□□ -0.18
PCF11-206ENST00000533018 JPT1Q9UK76 154 aa13.95□□□□□ -0.18
PCF11-206ENST00000533018 RAMP3O60896 148 aa13.94□□□□□ -0.18
PCF11-206ENST00000533018 RGS11O94810 467 aa13.94□□□□□ -0.18
PCF11-206ENST00000533018 IGHG4P01861 327 aa13.94□□□□□ -0.18
PCF11-206ENST00000533018 CD1AP06126 327 aa13.94□□□□□ -0.18
PCF11-206ENST00000533018 OR5H8P0DN80 308 aa13.94□□□□□ -0.18
PCF11-206ENST00000533018 ACTBP60709 375 aa13.94□□□□□ -0.18
PCF11-206ENST00000533018 GABPB1Q06547 395 aaPredicted RBP13.94□□□□□ -0.18
PCF11-206ENST00000533018 INSL4Q14641 139 aa13.94□□□□□ -0.18
PCF11-206ENST00000533018 LAIR2Q6ISS4 152 aa13.94□□□□□ -0.18
PCF11-206ENST00000533018 LYPD6Q86Y78 171 aa13.94□□□□□ -0.18
PCF11-206ENST00000533018 NANOGP1Q8N7R0 232 aa13.94□□□□□ -0.18
PCF11-206ENST00000533018 IL1F10Q8WWZ1 152 aa13.94□□□□□ -0.18
PCF11-206ENST00000533018 GALMQ96C23 342 aa13.94□□□□□ -0.18
PCF11-206ENST00000533018 MBNL3Q9NUK0 354 aaKnown RBP13.94□□□□□ -0.18
PCF11-206ENST00000533018 WSB1Q9Y6I7 421 aa13.94□□□□□ -0.18
PCF11-206ENST00000533018 SEC14L6B5MCN3 397 aa13.93□□□□□ -0.18
PCF11-206ENST00000533018 IGF1P05019 195 aa13.93□□□□□ -0.18
PCF11-206ENST00000533018 HTD2P86397 168 aa13.93□□□□□ -0.18
PCF11-206ENST00000533018 CFHR3Q02985 330 aa13.93□□□□□ -0.18
PCF11-206ENST00000533018 ACSM3Q53FZ2 586 aa13.93□□□□□ -0.18
PCF11-206ENST00000533018 RBM48Q5RL73 367 aaKnown RBP13.93□□□□□ -0.18
PCF11-206ENST00000533018 C9orf66Q5T8R8 295 aa13.93□□□□□ -0.18
PCF11-206ENST00000533018 GLT8D1Q68CQ7 371 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms