RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 CCL20P78556 96 aa14.83□□□□□ -0.04
USH1C-205ENST00000527020 ZNF585BQ52M93 769 aa14.83□□□□□ -0.04
USH1C-205ENST00000527020 SP5Q6BEB4 398 aaPredicted RBP14.83□□□□□ -0.04
USH1C-205ENST00000527020 SPSB3Q6PJ21 355 aa14.83□□□□□ -0.04
USH1C-205ENST00000527020 RXFP4Q8TDU9 374 aa14.83□□□□□ -0.04
USH1C-205ENST00000527020 INTS1Q8N201 2190 aaKnown RBP14.82□□□□□ -0.04
USH1C-205ENST00000527020 TTC28Q96AY4 2481 aa14.82□□□□□ -0.04
USH1C-205ENST00000527020 PTPRBP23467 1997 aa14.82□□□□□ -0.04
USH1C-205ENST00000527020 TMEM210A6NLX4 147 aa14.82□□□□□ -0.04
USH1C-205ENST00000527020 COLCA2A8K830 154 aa14.82□□□□□ -0.04
USH1C-205ENST00000527020 WRBO00258 174 aa14.82□□□□□ -0.04
USH1C-205ENST00000527020 NDUFA2O43678 99 aa14.82□□□□□ -0.04
USH1C-205ENST00000527020 CNOT4O95628 575 aaKnown RBP14.82□□□□□ -0.04
USH1C-205ENST00000527020 HAND1O96004 215 aa14.82□□□□□ -0.04
USH1C-205ENST00000527020 ACAA1P09110 424 aaPredicted RBP14.82□□□□□ -0.04
USH1C-205ENST00000527020 RUNX1Q01196 453 aa14.82□□□□□ -0.04
USH1C-205ENST00000527020 A0A1B0GW64 132 aa14.81□□□□□ -0.04
USH1C-205ENST00000527020 FOXF2Q12947 444 aa14.81□□□□□ -0.04
USH1C-205ENST00000527020 ZNF826PQ6ZT77 177 aa14.81□□□□□ -0.04
USH1C-205ENST00000527020 LSM10Q969L4 123 aaKnown RBP14.81□□□□□ -0.04
USH1C-205ENST00000527020 FBXO7Q9Y3I1 522 aa14.81□□□□□ -0.04
USH1C-205ENST00000527020 CHD3Q12873 2000 aaKnown RBP14.81□□□□□ -0.04
USH1C-205ENST00000527020 UMAD1C9J7I0 102 aa14.81□□□□□ -0.04
USH1C-205ENST00000527020 WNT9BO14905 357 aa14.81□□□□□ -0.04
USH1C-205ENST00000527020 GPR37O15354 613 aa14.81□□□□□ -0.04
USH1C-205ENST00000527020 HSPA12AO43301 675 aa14.81□□□□□ -0.04
USH1C-205ENST00000527020 TXNL1O43396 289 aa14.81□□□□□ -0.04
USH1C-205ENST00000527020 HOXB1P14653 301 aaPredicted RBP14.81□□□□□ -0.04
USH1C-205ENST00000527020 CEACAM6P40199 344 aa14.81□□□□□ -0.04
USH1C-205ENST00000527020 AKR1C3P42330 323 aa14.81□□□□□ -0.04
USH1C-205ENST00000527020 CXorf67Q86X51 503 aaPredicted RBP14.81□□□□□ -0.04
USH1C-205ENST00000527020 LFNGQ8NES3 379 aa14.81□□□□□ -0.04
USH1C-205ENST00000527020 CACNG5Q9UF02 275 aa14.81□□□□□ -0.04
USH1C-205ENST00000527020 OR14J1Q9UGF5 321 aa14.81□□□□□ -0.04
USH1C-205ENST00000527020 MLXQ9UH92 298 aa14.81□□□□□ -0.04
USH1C-205ENST00000527020 DIDO1Q9BTC0 2240 aaKnown RBP14.81□□□□□ -0.04
USH1C-205ENST00000527020 H3BP45 60 aa14.8□□□□□ -0.04
USH1C-205ENST00000527020 GALR2O43603 387 aaPredicted RBP14.8□□□□□ -0.04
USH1C-205ENST00000527020 CRYBA1P05813 215 aa14.8□□□□□ -0.04
USH1C-205ENST00000527020 CEACAM1P13688 526 aa14.8□□□□□ -0.04
USH1C-205ENST00000527020 AKIRIN2Q53H80 203 aa14.8□□□□□ -0.04
USH1C-205ENST00000527020 DRAM1Q8N682 238 aa14.8□□□□□ -0.04
USH1C-205ENST00000527020 OR8G5Q8NG78 346 aa14.8□□□□□ -0.04
USH1C-205ENST00000527020 ATP5SQ99766 215 aa14.8□□□□□ -0.04
USH1C-205ENST00000527020 RARRES2Q99969 163 aa14.8□□□□□ -0.04
USH1C-205ENST00000527020 OBP2BQ9NPH6 170 aa14.8□□□□□ -0.04
USH1C-205ENST00000527020 KCNS2Q9ULS6 477 aa14.8□□□□□ -0.04
USH1C-205ENST00000527020 TRAV17A0A0B4J275 112 aa14.8□□□□□ -0.04
USH1C-205ENST00000527020 AWAT1Q58HT5 328 aa14.8□□□□□ -0.04
USH1C-205ENST00000527020 Q6ZR03 302 aa14.8□□□□□ -0.04
USH1C-205ENST00000527020 C1orf162Q8NEQ5 155 aaPredicted RBP14.8□□□□□ -0.04
USH1C-205ENST00000527020 CLCC1Q96S66 551 aa14.8□□□□□ -0.04
USH1C-205ENST00000527020 SMCO4Q9NRQ5 59 aa14.8□□□□□ -0.04
USH1C-205ENST00000527020 EP300Q09472 2414 aaPredicted RBP14.79□□□□□ -0.04
USH1C-205ENST00000527020 WDR1O75083 606 aa14.79□□□□□ -0.04
USH1C-205ENST00000527020 CECR9P0C854 216 aa14.79□□□□□ -0.04
USH1C-205ENST00000527020 TMEM267Q0VDI3 215 aaPredicted RBP14.79□□□□□ -0.04
USH1C-205ENST00000527020 FAM53AQ6NSI3 398 aaPredicted RBP14.79□□□□□ -0.04
USH1C-205ENST00000527020 OR1L1Q8NH94 360 aa14.79□□□□□ -0.04
USH1C-205ENST00000527020 GNPNAT1Q96EK6 184 aaPredicted RBP14.79□□□□□ -0.04
USH1C-205ENST00000527020 RAB40CQ96S21 281 aa14.79□□□□□ -0.04
USH1C-205ENST00000527020 PBDC1Q9BVG4 233 aa14.79□□□□□ -0.04
USH1C-205ENST00000527020 SLC35B3Q9H1N7 401 aa14.79□□□□□ -0.04
USH1C-205ENST00000527020 SAV1Q9H4B6 383 aaPredicted RBP14.79□□□□□ -0.04
USH1C-205ENST00000527020 PIGBOS1A0A0B4J2F0 54 aa14.78□□□□□ -0.04
USH1C-205ENST00000527020 PRR33A8MZF0 331 aa14.78□□□□□ -0.04
USH1C-205ENST00000527020 TFF1P04155 84 aa14.78□□□□□ -0.04
USH1C-205ENST00000527020 PAX6P26367 422 aa14.78□□□□□ -0.04
USH1C-205ENST00000527020 SULT1A1P50225 295 aa14.78□□□□□ -0.04
USH1C-205ENST00000527020 KDF1Q8NAX2 398 aaPredicted RBP14.78□□□□□ -0.04
USH1C-205ENST00000527020 RNASE11Q8TAA1 199 aaKnown RBP14.78□□□□□ -0.04
USH1C-205ENST00000527020 C5orf30Q96GV9 206 aa14.78□□□□□ -0.04
USH1C-205ENST00000527020 LIN7CQ9NUP9 197 aaKnown RBP14.78□□□□□ -0.04
USH1C-205ENST00000527020 RBM7Q9Y580 266 aaKnown RBP14.78□□□□□ -0.04
USH1C-205ENST00000527020 KLF2Q9Y5W3 355 aaPredicted RBP14.78□□□□□ -0.04
USH1C-205ENST00000527020 HEATR1Q9H583 2144 aaKnown RBP14.78□□□□□ -0.04
USH1C-205ENST00000527020 C7orf77A4D0Y5 90 aa14.78□□□□□ -0.04
USH1C-205ENST00000527020 ZNF16P17020 682 aaPredicted RBP14.78□□□□□ -0.04
USH1C-205ENST00000527020 RPL23AP62750 156 aaKnown RBP14.78□□□□□ -0.04
USH1C-205ENST00000527020 ACSF3Q4G176 576 aaPredicted RBP14.78□□□□□ -0.04
USH1C-205ENST00000527020 AVPI1Q5T686 147 aa14.78□□□□□ -0.04
USH1C-205ENST00000527020 RPS10P5Q9NQ39 176 aa14.78□□□□□ -0.04
USH1C-205ENST00000527020 FZR1Q9UM11 496 aa14.78□□□□□ -0.04
USH1C-205ENST00000527020 WSB1Q9Y6I7 421 aa14.78□□□□□ -0.04
USH1C-205ENST00000527020 USF3Q68DE3 2245 aa14.77□□□□□ -0.04
USH1C-205ENST00000527020 TMEM30CPA0ZSE6 113 aa14.77□□□□□ -0.04
USH1C-205ENST00000527020 C12orf77C9JDV5 145 aa14.77□□□□□ -0.04
USH1C-205ENST00000527020 SYNGR2O43760 224 aa14.77□□□□□ -0.04
USH1C-205ENST00000527020 OR3A1P47881 315 aa14.77□□□□□ -0.04
USH1C-205ENST00000527020 TAS2R30P59541 319 aa14.77□□□□□ -0.04
USH1C-205ENST00000527020 PRAMEF6Q5VXH4 476 aa14.77□□□□□ -0.04
USH1C-205ENST00000527020 STX12Q86Y82 276 aa14.77□□□□□ -0.04
USH1C-205ENST00000527020 SARAFQ96BY9 339 aa14.77□□□□□ -0.04
USH1C-205ENST00000527020 EGLN1Q9GZT9 426 aa14.77□□□□□ -0.04
USH1C-205ENST00000527020 PLSCR4Q9NRQ2 329 aa14.77□□□□□ -0.04
USH1C-205ENST00000527020 DKK4Q9UBT3 224 aa14.77□□□□□ -0.04
USH1C-205ENST00000527020 CACNA1DQ01668 2161 aa14.77□□□□□ -0.05
USH1C-205ENST00000527020 IGLV1-44P01699 117 aa14.77□□□□□ -0.05
USH1C-205ENST00000527020 SNRNP70P08621 437 aaKnown RBP14.77□□□□□ -0.05
USH1C-205ENST00000527020 KITLGP21583 273 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms