RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 HSPA12AO43301 675 aa11.19□□□□□ -0.62
CD44-224ENST00000526669 LANCL1O43813 399 aa11.19□□□□□ -0.62
CD44-224ENST00000526669 HLA-DMAP28067 261 aa11.19□□□□□ -0.62
CD44-224ENST00000526669 ETV6P41212 452 aa11.19□□□□□ -0.62
CD44-224ENST00000526669 KIR2DS4P43632 304 aa11.19□□□□□ -0.62
CD44-224ENST00000526669 LOXL3P58215 753 aa11.19□□□□□ -0.62
CD44-224ENST00000526669 KIR2DS1Q14954 304 aa11.19□□□□□ -0.62
CD44-224ENST00000526669 BRD3OSQ6XYD6 125 aa11.19□□□□□ -0.62
CD44-224ENST00000526669 ZNF554Q86TJ5 538 aa11.19□□□□□ -0.62
CD44-224ENST00000526669 OR4A4PQ8NGN8 299 aa11.19□□□□□ -0.62
CD44-224ENST00000526669 OR13D1Q8NGV5 346 aa11.19□□□□□ -0.62
CD44-224ENST00000526669 C15orf40Q8WUR7 153 aa11.19□□□□□ -0.62
CD44-224ENST00000526669 GALMQ96C23 342 aa11.19□□□□□ -0.62
CD44-224ENST00000526669 CABLES2Q9BTV7 478 aa11.19□□□□□ -0.62
CD44-224ENST00000526669 SRRQ9GZT4 340 aa11.19□□□□□ -0.62
CD44-224ENST00000526669 PARP12Q9H0J9 701 aaKnown RBP11.19□□□□□ -0.62
CD44-224ENST00000526669 HEXA-AS1Q9H8Q6 139 aa11.19□□□□□ -0.62
CD44-224ENST00000526669 LINC00574Q9H8X3 128 aa11.19□□□□□ -0.62
CD44-224ENST00000526669 AKIP1Q9NQ31 210 aa11.19□□□□□ -0.62
CD44-224ENST00000526669 OR2S2Q9NQN1 319 aa11.19□□□□□ -0.62
CD44-224ENST00000526669 ANXA10Q9UJ72 324 aa11.19□□□□□ -0.62
CD44-224ENST00000526669 SOX21Q9Y651 276 aaPredicted RBP11.19□□□□□ -0.62
CD44-224ENST00000526669 MXRA5Q9NR99 2828 aa11.18□□□□□ -0.62
CD44-224ENST00000526669 J3QRK9 145 aa11.18□□□□□ -0.62
CD44-224ENST00000526669 RBBP9O75884 186 aa11.18□□□□□ -0.62
CD44-224ENST00000526669 TPPPO94811 219 aa11.18□□□□□ -0.62
CD44-224ENST00000526669 PMP2P02689 132 aa11.18□□□□□ -0.62
CD44-224ENST00000526669 ARG1P05089 322 aa11.18□□□□□ -0.62
CD44-224ENST00000526669 RCVRNP35243 200 aa11.18□□□□□ -0.62
CD44-224ENST00000526669 SRP14P37108 136 aaKnown RBP11.18□□□□□ -0.62
CD44-224ENST00000526669 MRPS10P82664 201 aaKnown RBP11.18□□□□□ -0.62
CD44-224ENST00000526669 SRSF7Q16629 238 aaKnown RBP eCLIP11.18□□□□□ -0.62
CD44-224ENST00000526669 CHRFAM7AQ494W8 412 aa11.18□□□□□ -0.62
CD44-224ENST00000526669 GPR157Q5UAW9 335 aa11.18□□□□□ -0.62
CD44-224ENST00000526669 NCR3LG1Q68D85 454 aa11.18□□□□□ -0.62
CD44-224ENST00000526669 Q6ZS49 121 aa11.18□□□□□ -0.62
CD44-224ENST00000526669 ABHD12Q8N2K0 398 aa11.18□□□□□ -0.62
CD44-224ENST00000526669 Q8N402 240 aa11.18□□□□□ -0.62
CD44-224ENST00000526669 OR10A7Q8NGE5 316 aa11.18□□□□□ -0.62
CD44-224ENST00000526669 CLEC7AQ9BXN2 247 aa11.18□□□□□ -0.62
CD44-224ENST00000526669 UNKLQ9H9P5 680 aaKnown RBP11.18□□□□□ -0.62
CD44-224ENST00000526669 MTFP1Q9UDX5 166 aa11.18□□□□□ -0.62
CD44-224ENST00000526669 PSG11Q9UQ72 335 aa11.18□□□□□ -0.62
CD44-224ENST00000526669 IGHV1-69DA0A0B4J2H0 117 aa11.17□□□□□ -0.62
CD44-224ENST00000526669 POM121CA8CG34 1229 aa11.17□□□□□ -0.62
CD44-224ENST00000526669 M0QYG6 137 aa11.17□□□□□ -0.62
CD44-224ENST00000526669 GSTZ1O43708 216 aaPredicted RBP11.17□□□□□ -0.62
CD44-224ENST00000526669 FSHBP01225 129 aa11.17□□□□□ -0.62
CD44-224ENST00000526669 IGHV1-69P01742 117 aa11.17□□□□□ -0.62
CD44-224ENST00000526669 NAT1P18440 290 aa11.17□□□□□ -0.62
CD44-224ENST00000526669 PAX6P26367 422 aa11.17□□□□□ -0.62
CD44-224ENST00000526669 PTBP1P26599 531 aaKnown RBP eCLIP11.17□□□□□ -0.623e-6■■■■■ 30.2
CD44-224ENST00000526669 HRH1P35367 487 aa11.17□□□□□ -0.62
CD44-224ENST00000526669 CEACAM6P40199 344 aa11.17□□□□□ -0.62
CD44-224ENST00000526669 HTD2P86397 168 aa11.17□□□□□ -0.62
CD44-224ENST00000526669 OR52M1Q8NGK5 317 aa11.17□□□□□ -0.62
CD44-224ENST00000526669 OR5H2Q8NGV7 314 aa11.17□□□□□ -0.62
CD44-224ENST00000526669 NANPQ8TBE9 248 aa11.17□□□□□ -0.62
CD44-224ENST00000526669 C22orf15Q8WYQ4 148 aa11.17□□□□□ -0.62
CD44-224ENST00000526669 SDHCQ99643 169 aaPredicted RBP11.17□□□□□ -0.62
CD44-224ENST00000526669 GINS4Q9BRT9 223 aa11.17□□□□□ -0.62
CD44-224ENST00000526669 EHFQ9NZC4 300 aa11.17□□□□□ -0.62
CD44-224ENST00000526669 ZNF69Q9UC07 566 aa11.17□□□□□ -0.62
CD44-224ENST00000526669 JPT1Q9UK76 154 aa11.17□□□□□ -0.62
CD44-224ENST00000526669 TRBV6-7A0A0A0MS04 114 aa11.16□□□□□ -0.62
CD44-224ENST00000526669 TOR1AO14656 332 aa11.16□□□□□ -0.62
CD44-224ENST00000526669 NPFFO15130 113 aa11.16□□□□□ -0.62
CD44-224ENST00000526669 HNF1AP20823 631 aa11.16□□□□□ -0.62
CD44-224ENST00000526669 NFYAP23511 347 aaPredicted RBP11.16□□□□□ -0.62
CD44-224ENST00000526669 CD34P28906 385 aa11.16□□□□□ -0.62
CD44-224ENST00000526669 OR3A3P47888 321 aa11.16□□□□□ -0.62
CD44-224ENST00000526669 RFX2P48378 723 aa11.16□□□□□ -0.62
CD44-224ENST00000526669 UBE2E1P51965 193 aa11.16□□□□□ -0.62
CD44-224ENST00000526669 ACTBP60709 375 aa11.16□□□□□ -0.62
CD44-224ENST00000526669 ACTG1P63261 375 aa11.16□□□□□ -0.62
CD44-224ENST00000526669 CDK10Q15131 360 aa11.16□□□□□ -0.62
CD44-224ENST00000526669 MORN2Q502X0 79 aa11.16□□□□□ -0.62
CD44-224ENST00000526669 LHFPL4Q7Z7J7 247 aa11.16□□□□□ -0.62
CD44-224ENST00000526669 LYSMD2Q8IV50 215 aa11.16□□□□□ -0.62
CD44-224ENST00000526669 ZNF439Q8NDP4 499 aa11.16□□□□□ -0.62
CD44-224ENST00000526669 OR5AP2Q8NGF4 316 aa11.16□□□□□ -0.62
CD44-224ENST00000526669 OR10J5Q8NHC4 309 aa11.16□□□□□ -0.62
CD44-224ENST00000526669 C17orf50Q8WW18 174 aa11.16□□□□□ -0.62
CD44-224ENST00000526669 S100ZQ8WXG8 99 aa11.16□□□□□ -0.62
CD44-224ENST00000526669 THAP7Q9BT49 309 aaPredicted RBP11.16□□□□□ -0.62
CD44-224ENST00000526669 RDH8Q9NYR8 311 aa11.16□□□□□ -0.62
CD44-224ENST00000526669 A0A087X0M5 115 aa11.15□□□□□ -0.62
CD44-224ENST00000526669 A0A1B0GX30 115 aa11.15□□□□□ -0.62
CD44-224ENST00000526669 ODF3BA8MYP8 253 aa11.15□□□□□ -0.62
CD44-224ENST00000526669 J3QR06 171 aa11.15□□□□□ -0.62
CD44-224ENST00000526669 ST8SIA5O15466 376 aa11.15□□□□□ -0.62
CD44-224ENST00000526669 YPEL1O60688 119 aa11.15□□□□□ -0.62
CD44-224ENST00000526669 RGS11O94810 467 aa11.15□□□□□ -0.62
CD44-224ENST00000526669 CD3DP04234 171 aa11.15□□□□□ -0.62
CD44-224ENST00000526669 ZBTB25P24278 435 aa11.15□□□□□ -0.62
CD44-224ENST00000526669 SAA4P35542 130 aa11.15□□□□□ -0.62
CD44-224ENST00000526669 ZNF134P52741 427 aa11.15□□□□□ -0.62
CD44-224ENST00000526669 TAS2R46P59540 309 aa11.15□□□□□ -0.62
CD44-224ENST00000526669 ZNF45Q02386 682 aa11.15□□□□□ -0.62
CD44-224ENST00000526669 BAK1Q16611 211 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms