RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 IGHV3-72A0A0B4J1Y9 119 aa13.53□□□□□ -0.24
CCS-203ENST00000526058 DENRO43583 198 aaKnown RBP13.53□□□□□ -0.24
CCS-203ENST00000526058 IGKV1D-33P01593 117 aa13.53□□□□□ -0.24
CCS-203ENST00000526058 IGKV1-33P01594 117 aa13.53□□□□□ -0.24
CCS-203ENST00000526058 TMEM11P17152 192 aa13.53□□□□□ -0.24
CCS-203ENST00000526058 BLVRBP30043 206 aaPredicted RBP13.53□□□□□ -0.24
CCS-203ENST00000526058 GABARAPL2P60520 117 aa13.53□□□□□ -0.24
CCS-203ENST00000526058 RAB11BQ15907 218 aa13.53□□□□□ -0.24
CCS-203ENST00000526058 NSUN5P1Q3KNT7 163 aa13.53□□□□□ -0.24
CCS-203ENST00000526058 Q3ZCU0 254 aa13.53□□□□□ -0.24
CCS-203ENST00000526058 CT45A1Q5HYN5 189 aa13.53□□□□□ -0.24
CCS-203ENST00000526058 C9orf152Q5JTZ5 239 aa13.53□□□□□ -0.24
CCS-203ENST00000526058 SLC25A48Q6ZT89 311 aaKnown RBP13.53□□□□□ -0.24
CCS-203ENST00000526058 MOB3BQ86TA1 216 aa13.53□□□□□ -0.24
CCS-203ENST00000526058 OR51D1Q8NGF3 324 aa13.53□□□□□ -0.24
CCS-203ENST00000526058 OR52L2PQ8NGH6 319 aa13.53□□□□□ -0.24
CCS-203ENST00000526058 CT45A3Q8NHU0 189 aa13.53□□□□□ -0.24
CCS-203ENST00000526058 ST6GALNAC6Q969X2 333 aa13.53□□□□□ -0.24
CCS-203ENST00000526058 CITED2Q99967 270 aaPredicted RBP13.53□□□□□ -0.24
CCS-203ENST00000526058 RAB9BQ9NP90 201 aa13.53□□□□□ -0.24
CCS-203ENST00000526058 OR2S2Q9NQN1 319 aa13.53□□□□□ -0.24
CCS-203ENST00000526058 KCNIP1Q9NZI2 227 aa13.53□□□□□ -0.24
CCS-203ENST00000526058 MOB4Q9Y3A3 225 aa13.53□□□□□ -0.24
CCS-203ENST00000526058 M0QZK8 103 aa13.52□□□□□ -0.25
CCS-203ENST00000526058 SOCS1O15524 211 aa13.52□□□□□ -0.25
CCS-203ENST00000526058 KCNAB3O43448 404 aa13.52□□□□□ -0.25
CCS-203ENST00000526058 GNMTQ14749 295 aa13.52□□□□□ -0.25
CCS-203ENST00000526058 Q6ZPA2 131 aa13.52□□□□□ -0.25
CCS-203ENST00000526058 OR2W3Q7Z3T1 314 aa13.52□□□□□ -0.25
CCS-203ENST00000526058 OR5AU1Q8NGC0 362 aa13.52□□□□□ -0.25
CCS-203ENST00000526058 RTN4IP1Q8WWV3 396 aaPredicted RBP13.52□□□□□ -0.25
CCS-203ENST00000526058 RBMXL1Q96E39 390 aaKnown RBP13.52□□□□□ -0.25
CCS-203ENST00000526058 NDUFB11Q9NX14 153 aa13.52□□□□□ -0.25
CCS-203ENST00000526058 V9GY05 133 aa13.52□□□□□ -0.25
CCS-203ENST00000526058 SHISA3A0PJX4 238 aa13.51□□□□□ -0.25
CCS-203ENST00000526058 ADARB2-AS1A8MUL3 147 aa13.51□□□□□ -0.25
CCS-203ENST00000526058 WIPF1O43516 503 aa13.51□□□□□ -0.25
CCS-203ENST00000526058 IL3RAP26951 378 aa13.51□□□□□ -0.25
CCS-203ENST00000526058 PPP1CCP36873 323 aaKnown RBP13.51□□□□□ -0.25
CCS-203ENST00000526058 DEFA6Q01524 100 aa13.51□□□□□ -0.25
CCS-203ENST00000526058 EBI3Q14213 229 aa13.51□□□□□ -0.25
CCS-203ENST00000526058 C2orf76Q3KRA6 126 aa13.51□□□□□ -0.25
CCS-203ENST00000526058 TMEM30BQ3MIR4 351 aa13.51□□□□□ -0.25
CCS-203ENST00000526058 MORN2Q502X0 79 aa13.51□□□□□ -0.25
CCS-203ENST00000526058 HES5Q5TA89 166 aa13.51□□□□□ -0.25
CCS-203ENST00000526058 ZNF554Q86TJ5 538 aa13.51□□□□□ -0.25
CCS-203ENST00000526058 SPARTQ8N0X7 666 aa13.51□□□□□ -0.25
CCS-203ENST00000526058 FAM89BQ8N5H3 189 aa13.51□□□□□ -0.25
CCS-203ENST00000526058 FAM3DQ96BQ1 224 aa13.51□□□□□ -0.25
CCS-203ENST00000526058 URM1Q9BTM9 101 aaKnown RBP13.51□□□□□ -0.25
CCS-203ENST00000526058 Q9H521 79 aa13.51□□□□□ -0.25
CCS-203ENST00000526058 PLEKHJ1Q9NW61 149 aa13.51□□□□□ -0.25
CCS-203ENST00000526058 NOTCH3Q9UM47 2321 aa13.51□□□□□ -0.25
CCS-203ENST00000526058 FOXI3A8MTJ6 420 aaPredicted RBP13.5□□□□□ -0.25
CCS-203ENST00000526058 ZNF736B4DX44 427 aaPredicted RBP13.5□□□□□ -0.25
CCS-203ENST00000526058 PLXNB1O43157 2135 aa13.5□□□□□ -0.25
CCS-203ENST00000526058 MRPS14O60783 128 aaKnown RBP13.5□□□□□ -0.25
CCS-203ENST00000526058 NAPSAO96009 420 aa13.5□□□□□ -0.25
CCS-203ENST00000526058 VEGFCP49767 419 aa13.5□□□□□ -0.25
CCS-203ENST00000526058 TMEM50BP56557 158 aa13.5□□□□□ -0.25
CCS-203ENST00000526058 OR10A3P58181 314 aa13.5□□□□□ -0.25
CCS-203ENST00000526058 PLA2G7Q13093 441 aa13.5□□□□□ -0.25
CCS-203ENST00000526058 HMGN3Q15651 99 aa13.5□□□□□ -0.25
CCS-203ENST00000526058 UBE2UQ5VVX9 321 aa13.5□□□□□ -0.25
CCS-203ENST00000526058 CD200R1LQ6Q8B3 271 aa13.5□□□□□ -0.25
CCS-203ENST00000526058 C10orf99Q6UWK7 81 aa13.5□□□□□ -0.25
CCS-203ENST00000526058 CENPVQ7Z7K6 275 aaPredicted RBP13.5□□□□□ -0.25
CCS-203ENST00000526058 SVOPQ8N4V2 548 aa13.5□□□□□ -0.25
CCS-203ENST00000526058 C5orf56Q8N8D9 126 aa13.5□□□□□ -0.25
CCS-203ENST00000526058 EAF1Q96JC9 268 aaPredicted RBP13.5□□□□□ -0.25
CCS-203ENST00000526058 TGP01266 2768 aa13.49□□□□□ -0.25
CCS-203ENST00000526058 TRAV1-2A0A0B4J238 106 aa13.49□□□□□ -0.25
CCS-203ENST00000526058 TMEM272A0A1B0GTI8 110 aa13.49□□□□□ -0.25
CCS-203ENST00000526058 TRDV1A0A1B0GX56 115 aa13.49□□□□□ -0.25
CCS-203ENST00000526058 LDLRAD4O15165 306 aa13.49□□□□□ -0.25
CCS-203ENST00000526058 ZNF137PP52743 207 aa13.49□□□□□ -0.25
CCS-203ENST00000526058 HTD2P86397 168 aa13.49□□□□□ -0.25
CCS-203ENST00000526058 TCTEX1D4Q5JR98 221 aa13.49□□□□□ -0.25
CCS-203ENST00000526058 STEAP3Q658P3 488 aa13.49□□□□□ -0.25
CCS-203ENST00000526058 ZNF880Q6PDB4 577 aa13.49□□□□□ -0.25
CCS-203ENST00000526058 NDUFA11Q86Y39 141 aa13.49□□□□□ -0.25
CCS-203ENST00000526058 TGIF2LXQ8IUE1 241 aa13.49□□□□□ -0.25
CCS-203ENST00000526058 IZUMO1Q8IYV9 350 aa13.49□□□□□ -0.25
CCS-203ENST00000526058 SETD6Q8TBK2 473 aa13.49□□□□□ -0.25
CCS-203ENST00000526058 GALMQ96C23 342 aa13.49□□□□□ -0.25
CCS-203ENST00000526058 HDHD3Q9BSH5 251 aaPredicted RBP13.49□□□□□ -0.25
CCS-203ENST00000526058 CHMP1AQ9HD42 196 aaPredicted RBP13.49□□□□□ -0.25
CCS-203ENST00000526058 AK3Q9UIJ7 227 aa13.49□□□□□ -0.25
CCS-203ENST00000526058 JPT1Q9UK76 154 aa13.49□□□□□ -0.25
CCS-203ENST00000526058 LRRC42Q9Y546 428 aa13.49□□□□□ -0.25
CCS-203ENST00000526058 FGF16O43320 207 aa13.48□□□□□ -0.25
CCS-203ENST00000526058 YPEL1O60688 119 aa13.48□□□□□ -0.25
CCS-203ENST00000526058 CD1BP29016 333 aa13.48□□□□□ -0.25
CCS-203ENST00000526058 PSMD7P51665 324 aa13.48□□□□□ -0.25
CCS-203ENST00000526058 CD83Q01151 205 aa13.48□□□□□ -0.25
CCS-203ENST00000526058 C22orf42Q6IC83 251 aa13.48□□□□□ -0.25
CCS-203ENST00000526058 Q8N6K4 173 aa13.48□□□□□ -0.25
CCS-203ENST00000526058 OR2T10Q8NGZ9 312 aa13.48□□□□□ -0.25
CCS-203ENST00000526058 IL1F10Q8WWZ1 152 aa13.48□□□□□ -0.25
CCS-203ENST00000526058 ARHGAP5-AS1Q96IT6 56 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms