RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 COX19Q49B96 90 aa14.08□□□□□ -0.16
PCDHA3-201ENST00000522353 GPA33Q99795 319 aa14.08□□□□□ -0.16
PCDHA3-201ENST00000522353 V9GYH0 126 aa14.08□□□□□ -0.16
PCDHA3-201ENST00000522353 TEX50A0A1B0GTY4 177 aa14.08□□□□□ -0.16
PCDHA3-201ENST00000522353 A0A1W2PPE3 182 aa14.08□□□□□ -0.16
PCDHA3-201ENST00000522353 HTN1P15515 57 aa14.08□□□□□ -0.16
PCDHA3-201ENST00000522353 HIST1H3AP68431 136 aa14.08□□□□□ -0.16
PCDHA3-201ENST00000522353 IGLV3-21P80748 117 aaPredicted RBP14.08□□□□□ -0.16
PCDHA3-201ENST00000522353 Q1RN00 199 aa14.08□□□□□ -0.16
PCDHA3-201ENST00000522353 RNASEKQ6P5S7 137 aaKnown RBP14.08□□□□□ -0.16
PCDHA3-201ENST00000522353 UFC1Q9Y3C8 167 aa14.08□□□□□ -0.16
PCDHA3-201ENST00000522353 FCN1O00602 326 aa14.07□□□□□ -0.16
PCDHA3-201ENST00000522353 FOXH1O75593 365 aa14.07□□□□□ -0.16
PCDHA3-201ENST00000522353 FABP4P15090 132 aa14.07□□□□□ -0.16
PCDHA3-201ENST00000522353 SULT1A1P50225 295 aa14.07□□□□□ -0.16
PCDHA3-201ENST00000522353 TEPPQ6URK8 271 aa14.07□□□□□ -0.16
PCDHA3-201ENST00000522353 MUC15Q8N387 334 aa14.07□□□□□ -0.16
PCDHA3-201ENST00000522353 ZPLD1Q8TCW7 415 aa14.07□□□□□ -0.16
PCDHA3-201ENST00000522353 VAMP8Q9BV40 100 aa14.07□□□□□ -0.16
PCDHA3-201ENST00000522353 OR51B2Q9Y5P1 312 aa14.07□□□□□ -0.16
PCDHA3-201ENST00000522353 FAM90A10PA6NDY2 464 aa14.07□□□□□ -0.16
PCDHA3-201ENST00000522353 FAM90A18PA6NE21 464 aa14.07□□□□□ -0.16
PCDHA3-201ENST00000522353 FAM90A16PA6NEW6 464 aa14.07□□□□□ -0.16
PCDHA3-201ENST00000522353 RBFOX3A6NFN3 312 aa14.07□□□□□ -0.16
PCDHA3-201ENST00000522353 FAM90A20PA6NIJ5 464 aa14.07□□□□□ -0.16
PCDHA3-201ENST00000522353 FAM90A8PA6NJQ4 464 aa14.07□□□□□ -0.16
PCDHA3-201ENST00000522353 FAM90A7PA6NKC0 464 aa14.07□□□□□ -0.16
PCDHA3-201ENST00000522353 FAM90A22PA8MWA6 464 aa14.07□□□□□ -0.16
PCDHA3-201ENST00000522353 FAM90A12PA8MX19 464 aa14.07□□□□□ -0.16
PCDHA3-201ENST00000522353 FAM90A5PA8MXJ8 464 aa14.07□□□□□ -0.16
PCDHA3-201ENST00000522353 FAM90A23PA8MXZ1 464 aa14.07□□□□□ -0.16
PCDHA3-201ENST00000522353 PHOX2AO14813 284 aa14.07□□□□□ -0.16
PCDHA3-201ENST00000522353 IGF2P01344 180 aa14.07□□□□□ -0.16
PCDHA3-201ENST00000522353 FAM90A15PP0C7V4 464 aa14.07□□□□□ -0.16
PCDHA3-201ENST00000522353 FAM90A13PP0C7W8 464 aa14.07□□□□□ -0.16
PCDHA3-201ENST00000522353 FAM90A14PP0C7W9 464 aa14.07□□□□□ -0.16
PCDHA3-201ENST00000522353 FAM90A24PP0C7X0 464 aa14.07□□□□□ -0.16
PCDHA3-201ENST00000522353 TCTEX1D1Q8N7M0 179 aa14.07□□□□□ -0.16
PCDHA3-201ENST00000522353 FAM222BQ8WU58 562 aa14.07□□□□□ -0.16
PCDHA3-201ENST00000522353 SSMEM1Q8WWF3 244 aa14.07□□□□□ -0.16
PCDHA3-201ENST00000522353 LINC00052Q96N35 136 aa14.07□□□□□ -0.16
PCDHA3-201ENST00000522353 J3QW42 95 aa14.07□□□□□ -0.16
PCDHA3-201ENST00000522353 HPXP02790 462 aa14.07□□□□□ -0.16
PCDHA3-201ENST00000522353 OR4P4Q8NGL7 312 aa14.07□□□□□ -0.16
PCDHA3-201ENST00000522353 CCL19Q99731 98 aa14.07□□□□□ -0.16
PCDHA3-201ENST00000522353 CORTO00230 105 aa14.07□□□□□ -0.16
PCDHA3-201ENST00000522353 MMD2Q8IY49 270 aa14.07□□□□□ -0.16
PCDHA3-201ENST00000522353 NAT8Q9UHE5 227 aa14.07□□□□□ -0.16
PCDHA3-201ENST00000522353 A0A1W2PS18 150 aa14.06□□□□□ -0.16
PCDHA3-201ENST00000522353 C9orf172C9J069 976 aa14.06□□□□□ -0.16
PCDHA3-201ENST00000522353 HBZP02008 142 aa14.06□□□□□ -0.16
PCDHA3-201ENST00000522353 FSTP19883 344 aa14.06□□□□□ -0.16
PCDHA3-201ENST00000522353 B2MP61769 119 aa14.06□□□□□ -0.16
PCDHA3-201ENST00000522353 ROM1Q03395 351 aa14.06□□□□□ -0.16
PCDHA3-201ENST00000522353 IQCJQ1A5X6 159 aa14.06□□□□□ -0.16
PCDHA3-201ENST00000522353 WFDC3Q8IUB2 231 aa14.06□□□□□ -0.16
PCDHA3-201ENST00000522353 TPRX1Q8N7U7 411 aa14.06□□□□□ -0.16
PCDHA3-201ENST00000522353 CTHRC1Q96CG8 243 aa14.06□□□□□ -0.16
PCDHA3-201ENST00000522353 FAM210BQ96KR6 192 aa14.06□□□□□ -0.16
PCDHA3-201ENST00000522353 TIMP4Q99727 224 aa14.06□□□□□ -0.16
PCDHA3-201ENST00000522353 ANKRD31Q8N7Z5 1873 aa14.06□□□□□ -0.16
PCDHA3-201ENST00000522353 TMEM229AB2RXF0 380 aa14.06□□□□□ -0.16
PCDHA3-201ENST00000522353 KLF9Q13886 244 aaPredicted RBP14.06□□□□□ -0.16
PCDHA3-201ENST00000522353 IZUMO4Q1ZYL8 232 aa14.06□□□□□ -0.16
PCDHA3-201ENST00000522353 NSUN5P2Q63ZY6 315 aa14.06□□□□□ -0.16
PCDHA3-201ENST00000522353 MIXL1Q9H2W2 232 aa14.06□□□□□ -0.16
PCDHA3-201ENST00000522353 WASHC3Q9Y3C0 194 aa14.06□□□□□ -0.16
PCDHA3-201ENST00000522353 RTTNQ86VV8 2226 aa14.06□□□□□ -0.16
PCDHA3-201ENST00000522353 CDK2AP1O14519 115 aa14.06□□□□□ -0.16
PCDHA3-201ENST00000522353 VAMP3Q15836 100 aa14.06□□□□□ -0.16
PCDHA3-201ENST00000522353 SEC11CQ9BY50 192 aa14.06□□□□□ -0.16
PCDHA3-201ENST00000522353 IGSF23A1L1A6 192 aa14.06□□□□□ -0.16
PCDHA3-201ENST00000522353 KIAA1324LA8MWY0 1029 aaPredicted RBP14.06□□□□□ -0.16
PCDHA3-201ENST00000522353 NEURL1O76050 574 aa14.06□□□□□ -0.16
PCDHA3-201ENST00000522353 KIR3DL2P43630 455 aa14.06□□□□□ -0.16
PCDHA3-201ENST00000522353 FGF8P55075 233 aaPredicted RBP14.06□□□□□ -0.16
PCDHA3-201ENST00000522353 BSXQ3C1V8 233 aa14.06□□□□□ -0.16
PCDHA3-201ENST00000522353 HSD17B13Q7Z5P4 300 aaPredicted RBP14.06□□□□□ -0.16
PCDHA3-201ENST00000522353 SCNM1Q9BWG6 230 aa14.06□□□□□ -0.16
PCDHA3-201ENST00000522353 PPIAL4CA0A0B4J2A2 164 aa14.06□□□□□ -0.16
PCDHA3-201ENST00000522353 TIAF1O95411 115 aa14.06□□□□□ -0.16
PCDHA3-201ENST00000522353 PPIAL4GP0DN37 164 aa14.06□□□□□ -0.16
PCDHA3-201ENST00000522353 LIMS1P48059 325 aa14.06□□□□□ -0.16
PCDHA3-201ENST00000522353 HNRNPA3P51991 378 aaKnown RBP14.06□□□□□ -0.16
PCDHA3-201ENST00000522353 CLEC9AQ6UXN8 241 aa14.06□□□□□ -0.16
PCDHA3-201ENST00000522353 OR2H2O95918 312 aa14.05□□□□□ -0.16
PCDHA3-201ENST00000522353 APELAP0DMC3 54 aa14.05□□□□□ -0.16
PCDHA3-201ENST00000522353 Q6ZT83 130 aa14.05□□□□□ -0.16
PCDHA3-201ENST00000522353 BVESQ8NE79 360 aa14.05□□□□□ -0.16
PCDHA3-201ENST00000522353 MRPL24Q96A35 216 aaKnown RBP14.05□□□□□ -0.16
PCDHA3-201ENST00000522353 ST6GALNAC2Q9UJ37 374 aa14.05□□□□□ -0.16
PCDHA3-201ENST00000522353 PSG2P11465 335 aa14.05□□□□□ -0.16
PCDHA3-201ENST00000522353 SIGIRRQ6IA17 410 aa14.05□□□□□ -0.16
PCDHA3-201ENST00000522353 TMEM91Q6ZNR0 172 aa14.05□□□□□ -0.16
PCDHA3-201ENST00000522353 TMEM105Q8N8V8 129 aa14.05□□□□□ -0.16
PCDHA3-201ENST00000522353 KLF14Q8TD94 323 aaPredicted RBP14.05□□□□□ -0.16
PCDHA3-201ENST00000522353 TDRD15B5MCY1 1934 aaKnown RBP14.05□□□□□ -0.16
PCDHA3-201ENST00000522353 DHRS7CA6NNS2 312 aa14.05□□□□□ -0.16
PCDHA3-201ENST00000522353 FCGR3AP08637 254 aa14.05□□□□□ -0.16
PCDHA3-201ENST00000522353 NHLH1Q02575 133 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms