RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 ATG4DQ86TL0 474 aaPredicted RBP10.35□□□□□ -0.75
SPIDR-217ENST00000522117 BAGE3Q86Y29 109 aa10.35□□□□□ -0.75
SPIDR-217ENST00000522117 BAGE2Q86Y30 109 aa10.35□□□□□ -0.75
SPIDR-217ENST00000522117 FER1L6-AS1Q8NA97 138 aa10.35□□□□□ -0.75
SPIDR-217ENST00000522117 MRPL30Q8TCC3 161 aaKnown RBP10.35□□□□□ -0.75
SPIDR-217ENST00000522117 MCTS1Q9ULC4 181 aaKnown RBP10.35□□□□□ -0.75
SPIDR-217ENST00000522117 PPIAL4EA0A075B759 164 aa10.34□□□□□ -0.75
SPIDR-217ENST00000522117 PPIAL4CA0A0B4J2A2 164 aa10.34□□□□□ -0.75
SPIDR-217ENST00000522117 PPIAL4DF5H284 164 aa10.34□□□□□ -0.75
SPIDR-217ENST00000522117 MLNRO43193 412 aa10.34□□□□□ -0.75
SPIDR-217ENST00000522117 FOXS1O43638 330 aa10.34□□□□□ -0.75
SPIDR-217ENST00000522117 PPIAL4FP0DN26 164 aa10.34□□□□□ -0.75
SPIDR-217ENST00000522117 CTSEP14091 401 aa10.34□□□□□ -0.75
SPIDR-217ENST00000522117 KITLGP21583 273 aa10.34□□□□□ -0.75
SPIDR-217ENST00000522117 ABCA11PQ4W5N1 156 aa10.34□□□□□ -0.75
SPIDR-217ENST00000522117 UBALD2Q8IYN6 164 aa10.34□□□□□ -0.75
SPIDR-217ENST00000522117 OR1N2Q8NGR9 330 aa10.34□□□□□ -0.75
SPIDR-217ENST00000522117 LRRC3BQ96PB8 259 aa10.34□□□□□ -0.75
SPIDR-217ENST00000522117 SIGLEC12Q96PQ1 595 aa10.34□□□□□ -0.75
SPIDR-217ENST00000522117 TAAR6Q96RI8 345 aa10.34□□□□□ -0.75
SPIDR-217ENST00000522117 MPDZO75970 2070 aa10.34□□□□□ -0.75
SPIDR-217ENST00000522117 SERINC4A6NH21 518 aa10.34□□□□□ -0.75
SPIDR-217ENST00000522117 SLC33A1O00400 549 aaPredicted RBP10.34□□□□□ -0.75
SPIDR-217ENST00000522117 VENTXO95231 258 aa10.34□□□□□ -0.75
SPIDR-217ENST00000522117 TGFAP01135 160 aa10.34□□□□□ -0.75
SPIDR-217ENST00000522117 CTLA4P16410 223 aa10.34□□□□□ -0.75
SPIDR-217ENST00000522117 ANOS1P23352 680 aa10.34□□□□□ -0.75
SPIDR-217ENST00000522117 UCP1P25874 307 aa10.34□□□□□ -0.75
SPIDR-217ENST00000522117 PSG9Q00887 426 aa10.34□□□□□ -0.75
SPIDR-217ENST00000522117 TMEM249Q2WGJ8 235 aa10.34□□□□□ -0.75
SPIDR-217ENST00000522117 ATOH7Q8N100 152 aa10.34□□□□□ -0.75
SPIDR-217ENST00000522117 BATF2Q8N1L9 274 aa10.34□□□□□ -0.75
SPIDR-217ENST00000522117 OR51T1Q8NGJ9 327 aa10.34□□□□□ -0.75
SPIDR-217ENST00000522117 OR5D14Q8NGL3 314 aa10.34□□□□□ -0.75
SPIDR-217ENST00000522117 C11orf40Q8WZ69 217 aa10.34□□□□□ -0.75
SPIDR-217ENST00000522117 CITED2Q99967 270 aaPredicted RBP10.34□□□□□ -0.75
SPIDR-217ENST00000522117 VCX2Q9H322 139 aa10.34□□□□□ -0.75
SPIDR-217ENST00000522117 OBSL1O75147 1896 aa10.33□□□□□ -0.76
SPIDR-217ENST00000522117 MYO9BQ13459 2157 aa10.33□□□□□ -0.76
SPIDR-217ENST00000522117 SIVA1O15304 175 aa10.33□□□□□ -0.76
SPIDR-217ENST00000522117 TTRP02766 147 aa10.33□□□□□ -0.76
SPIDR-217ENST00000522117 C3orf79P0CE67 100 aa10.33□□□□□ -0.76
SPIDR-217ENST00000522117 CBLN1P23435 193 aa10.33□□□□□ -0.76
SPIDR-217ENST00000522117 IL12BP29460 328 aa10.33□□□□□ -0.76
SPIDR-217ENST00000522117 PLA2G5P39877 138 aa10.33□□□□□ -0.76
SPIDR-217ENST00000522117 RAB9AP51151 201 aa10.33□□□□□ -0.76
SPIDR-217ENST00000522117 ZNF133P52736 654 aaPredicted RBP10.33□□□□□ -0.76
SPIDR-217ENST00000522117 HDHD3Q9BSH5 251 aaPredicted RBP10.33□□□□□ -0.76
SPIDR-217ENST00000522117 APOOQ9BUR5 198 aa10.33□□□□□ -0.76
SPIDR-217ENST00000522117 RTN4RQ9BZR6 473 aa10.33□□□□□ -0.76
SPIDR-217ENST00000522117 NXT1Q9UKK6 140 aaKnown RBP10.33□□□□□ -0.76
SPIDR-217ENST00000522117 PRSS37A4D1T9 235 aa10.33□□□□□ -0.76
SPIDR-217ENST00000522117 DPRXA6NFQ7 191 aa10.33□□□□□ -0.76
SPIDR-217ENST00000522117 PHF1O43189 567 aaPredicted RBP10.33□□□□□ -0.76
SPIDR-217ENST00000522117 HNRNPA1P09651 372 aaKnown RBP eCLIP10.33□□□□□ -0.76
SPIDR-217ENST00000522117 IGLC1P0CG04 106 aa10.33□□□□□ -0.76
SPIDR-217ENST00000522117 BLVRBP30043 206 aaPredicted RBP10.33□□□□□ -0.76
SPIDR-217ENST00000522117 MDH2P40926 338 aaKnown RBP10.33□□□□□ -0.76
SPIDR-217ENST00000522117 ZNF141Q15928 474 aa10.33□□□□□ -0.76
SPIDR-217ENST00000522117 SPIN3Q5JUX0 258 aa10.33□□□□□ -0.76
SPIDR-217ENST00000522117 WBP2NLQ6ICG8 309 aa10.33□□□□□ -0.76
SPIDR-217ENST00000522117 CBLN3Q6UW01 205 aa10.33□□□□□ -0.76
SPIDR-217ENST00000522117 FAM57BQ71RH2 274 aa10.33□□□□□ -0.76
SPIDR-217ENST00000522117 ZNF721Q8TF20 911 aa10.33□□□□□ -0.76
SPIDR-217ENST00000522117 NEUROG1Q92886 237 aa10.33□□□□□ -0.76
SPIDR-217ENST00000522117 FAM110AQ9BQ89 295 aa10.33□□□□□ -0.76
SPIDR-217ENST00000522117 PCNX3Q9H6A9 2034 aa10.33□□□□□ -0.76
SPIDR-217ENST00000522117 TRAF3IP2O43734 574 aaPredicted RBP10.32□□□□□ -0.76
SPIDR-217ENST00000522117 SCGB1A1P11684 91 aa10.32□□□□□ -0.76
SPIDR-217ENST00000522117 EN2P19622 333 aaPredicted RBP10.32□□□□□ -0.76
SPIDR-217ENST00000522117 NPBWR2P48146 333 aa10.32□□□□□ -0.76
SPIDR-217ENST00000522117 PAX9P55771 341 aa10.32□□□□□ -0.76
SPIDR-217ENST00000522117 PSG3Q16557 428 aa10.32□□□□□ -0.76
SPIDR-217ENST00000522117 PRICKLE4Q2TBC4 344 aa10.32□□□□□ -0.76
SPIDR-217ENST00000522117 ASCL4Q6XD76 172 aa10.32□□□□□ -0.76
SPIDR-217ENST00000522117 MRPL18Q9H0U6 180 aaKnown RBP10.32□□□□□ -0.76
SPIDR-217ENST00000522117 ZNF286AQ9HBT8 521 aa10.32□□□□□ -0.76
SPIDR-217ENST00000522117 FAM206AQ9NX38 181 aa10.32□□□□□ -0.76
SPIDR-217ENST00000522117 MMP17Q9ULZ9 603 aa10.32□□□□□ -0.76
SPIDR-217ENST00000522117 OR1A2Q9Y585 309 aa10.32□□□□□ -0.76
SPIDR-217ENST00000522117 GOLGA4Q13439 2230 aaKnown RBP10.32□□□□□ -0.76
SPIDR-217ENST00000522117 LTBP2Q14767 1821 aa10.32□□□□□ -0.76
SPIDR-217ENST00000522117 TNRC18O15417 2968 aaPredicted RBP10.32□□□□□ -0.76
SPIDR-217ENST00000522117 MSR1P21757 451 aa10.32□□□□□ -0.76
SPIDR-217ENST00000522117 PSG4Q00888 419 aa10.32□□□□□ -0.76
SPIDR-217ENST00000522117 RAB31Q13636 194 aa10.32□□□□□ -0.76
SPIDR-217ENST00000522117 TESK1Q15569 626 aa10.32□□□□□ -0.76
SPIDR-217ENST00000522117 HAPLN4Q86UW8 402 aa10.32□□□□□ -0.76
SPIDR-217ENST00000522117 CMTM8Q8IZV2 173 aa10.32□□□□□ -0.76
SPIDR-217ENST00000522117 DEFB125Q8N687 156 aa10.32□□□□□ -0.76
SPIDR-217ENST00000522117 OR1B1Q8NGR6 318 aa10.32□□□□□ -0.76
SPIDR-217ENST00000522117 GATAD1Q8WUU5 269 aa10.32□□□□□ -0.76
SPIDR-217ENST00000522117 RLN3Q8WXF3 142 aa10.32□□□□□ -0.76
SPIDR-217ENST00000522117 HOXB13Q92826 284 aaPredicted RBP10.32□□□□□ -0.76
SPIDR-217ENST00000522117 RAB1CQ92928 201 aa10.32□□□□□ -0.76
SPIDR-217ENST00000522117 ZNF524Q96C55 264 aa10.32□□□□□ -0.76
SPIDR-217ENST00000522117 ANXA10Q9UJ72 324 aa10.32□□□□□ -0.76
SPIDR-217ENST00000522117 TRPM6Q9BX84 2022 aa10.32□□□□□ -0.76
SPIDR-217ENST00000522117 IFNA5P01569 189 aa10.31□□□□□ -0.76
SPIDR-217ENST00000522117 CCR2P41597 374 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms