RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 GRAMD2BQ96HH9 432 aa10.72□□□□□ -0.69
PCDHGA6-201ENST00000517434 ANXA10Q9UJ72 324 aa10.72□□□□□ -0.69
PCDHGA6-201ENST00000517434 ZDBF2Q9HCK1 2354 aa10.72□□□□□ -0.69
PCDHGA6-201ENST00000517434 PDCD6O75340 191 aa10.71□□□□□ -0.69
PCDHGA6-201ENST00000517434 NGFP01138 241 aa10.71□□□□□ -0.69
PCDHGA6-201ENST00000517434 CTSSP25774 331 aa10.71□□□□□ -0.69
PCDHGA6-201ENST00000517434 HERPUD1Q15011 391 aa10.71□□□□□ -0.69
PCDHGA6-201ENST00000517434 CD226Q15762 336 aa10.71□□□□□ -0.69
PCDHGA6-201ENST00000517434 TTC32Q5I0X7 151 aa10.71□□□□□ -0.69
PCDHGA6-201ENST00000517434 Q5PR19 223 aa10.71□□□□□ -0.69
PCDHGA6-201ENST00000517434 ZNF774Q6NX45 483 aa10.71□□□□□ -0.69
PCDHGA6-201ENST00000517434 TMEM116Q8NCL8 245 aa10.71□□□□□ -0.69
PCDHGA6-201ENST00000517434 OR10AD1Q8NGE0 317 aa10.71□□□□□ -0.69
PCDHGA6-201ENST00000517434 OR52L2PQ8NGH6 319 aa10.71□□□□□ -0.69
PCDHGA6-201ENST00000517434 NDUFAF3Q9BU61 184 aa10.71□□□□□ -0.69
PCDHGA6-201ENST00000517434 PRR13Q9NZ81 148 aa10.71□□□□□ -0.69
PCDHGA6-201ENST00000517434 PIPOXQ9P0Z9 390 aa10.71□□□□□ -0.69
PCDHGA6-201ENST00000517434 CES1P1Q9UKY3 287 aa10.71□□□□□ -0.69
PCDHGA6-201ENST00000517434 LTBRP36941 435 aa10.71□□□□□ -0.69
PCDHGA6-201ENST00000517434 LPAR6P43657 344 aa10.71□□□□□ -0.69
PCDHGA6-201ENST00000517434 LURAP1LQ8IV03 231 aa10.71□□□□□ -0.69
PCDHGA6-201ENST00000517434 TUSC5Q8IXB3 177 aa10.71□□□□□ -0.69
PCDHGA6-201ENST00000517434 AMER3Q8N944 861 aa10.71□□□□□ -0.69
PCDHGA6-201ENST00000517434 OR5A2Q8NGI9 324 aa10.71□□□□□ -0.69
PCDHGA6-201ENST00000517434 RNF7Q9UBF6 113 aa10.71□□□□□ -0.69
PCDHGA6-201ENST00000517434 PSME4Q14997 1843 aa10.71□□□□□ -0.7
PCDHGA6-201ENST00000517434 SMPD2O60906 423 aa10.71□□□□□ -0.7
PCDHGA6-201ENST00000517434 EML2O95834 649 aa10.71□□□□□ -0.7
PCDHGA6-201ENST00000517434 HAND1O96004 215 aa10.71□□□□□ -0.7
PCDHGA6-201ENST00000517434 MELTFP08582 738 aa10.71□□□□□ -0.7
PCDHGA6-201ENST00000517434 MMP9P14780 707 aa10.71□□□□□ -0.7
PCDHGA6-201ENST00000517434 CDKN2AP42771 156 aaKnown RBP10.71□□□□□ -0.7
PCDHGA6-201ENST00000517434 PSG6Q00889 435 aa10.71□□□□□ -0.7
PCDHGA6-201ENST00000517434 ANKRD55Q3KP44 614 aa10.71□□□□□ -0.7
PCDHGA6-201ENST00000517434 FBLIM1Q8WUP2 373 aa10.71□□□□□ -0.7
PCDHGA6-201ENST00000517434 ZNF256Q9Y2P7 627 aaPredicted RBP10.71□□□□□ -0.7
PCDHGA6-201ENST00000517434 NUP214P35658 2090 aaPredicted RBP10.71□□□□□ -0.7
PCDHGA6-201ENST00000517434 ASCC3Q8N3C0 2202 aaKnown RBP10.71□□□□□ -0.7
PCDHGA6-201ENST00000517434 TPRP12270 2363 aaKnown RBP10.71□□□□□ -0.7
PCDHGA6-201ENST00000517434 IGHV1-45A0A0A0MS14 117 aa10.7□□□□□ -0.7
PCDHGA6-201ENST00000517434 DNASE2O00115 360 aaPredicted RBP10.7□□□□□ -0.7
PCDHGA6-201ENST00000517434 GPR6P46095 362 aaPredicted RBP10.7□□□□□ -0.7
PCDHGA6-201ENST00000517434 SRSF9Q13242 221 aaKnown RBP eCLIP10.7□□□□□ -0.7
PCDHGA6-201ENST00000517434 FAM214BQ7L5A3 538 aa10.7□□□□□ -0.7
PCDHGA6-201ENST00000517434 TMEM183AQ8IXX5 376 aa10.7□□□□□ -0.7
PCDHGA6-201ENST00000517434 OR2V2Q96R30 315 aa10.7□□□□□ -0.7
PCDHGA6-201ENST00000517434 MRM2Q9UI43 246 aaKnown RBP10.7□□□□□ -0.7
PCDHGA6-201ENST00000517434 H3BVH4 76 aa10.7□□□□□ -0.7
PCDHGA6-201ENST00000517434 KCNAB3O43448 404 aa10.7□□□□□ -0.7
PCDHGA6-201ENST00000517434 CA6P23280 308 aa10.7□□□□□ -0.7
PCDHGA6-201ENST00000517434 YBX1P67809 324 aaKnown RBP10.7□□□□□ -0.7
PCDHGA6-201ENST00000517434 CTAG1AP78358 180 aa10.7□□□□□ -0.7
PCDHGA6-201ENST00000517434 PCGF1Q9BSM1 259 aa10.7□□□□□ -0.7
PCDHGA6-201ENST00000517434 TGIF2-C20orf24A0A0A6YYL0 155 aa10.7□□□□□ -0.7
PCDHGA6-201ENST00000517434 LRRC3CA6NJW4 275 aa10.7□□□□□ -0.7
PCDHGA6-201ENST00000517434 CDC42EP2O14613 210 aa10.7□□□□□ -0.7
PCDHGA6-201ENST00000517434 RER1O15258 196 aa10.7□□□□□ -0.7
PCDHGA6-201ENST00000517434 GREM1O60565 184 aa10.7□□□□□ -0.7
PCDHGA6-201ENST00000517434 ALKBH6Q3KRA9 238 aa10.7□□□□□ -0.7
PCDHGA6-201ENST00000517434 VSTM2AQ8TAG5 236 aa10.7□□□□□ -0.7
PCDHGA6-201ENST00000517434 CDC42EP3Q9UKI2 254 aa10.7□□□□□ -0.7
PCDHGA6-201ENST00000517434 SERF2P84101 59 aa10.7□□□□□ -0.7
PCDHGA6-201ENST00000517434 ATG4DQ86TL0 474 aaPredicted RBP10.7□□□□□ -0.7
PCDHGA6-201ENST00000517434 C20orf196Q8IYI0 205 aa10.7□□□□□ -0.7
PCDHGA6-201ENST00000517434 RNF2Q99496 336 aa10.7□□□□□ -0.7
PCDHGA6-201ENST00000517434 TECRQ9NZ01 308 aaKnown RBP10.7□□□□□ -0.7
PCDHGA6-201ENST00000517434 PEF1Q9UBV8 284 aaKnown RBP10.7□□□□□ -0.7
PCDHGA6-201ENST00000517434 SCN10AQ9Y5Y9 1956 aa10.7□□□□□ -0.7
PCDHGA6-201ENST00000517434 WDR81Q562E7 1941 aa10.69□□□□□ -0.7
PCDHGA6-201ENST00000517434 IGHV3-64DA0A0J9YX35 117 aa10.69□□□□□ -0.7
PCDHGA6-201ENST00000517434 A0A1W2PN81 502 aa10.69□□□□□ -0.7
PCDHGA6-201ENST00000517434 OR2T8A6NH00 312 aa10.69□□□□□ -0.7
PCDHGA6-201ENST00000517434 PRR19A6NJB7 356 aa10.69□□□□□ -0.7
PCDHGA6-201ENST00000517434 OR2A4O95047 310 aa10.69□□□□□ -0.7
PCDHGA6-201ENST00000517434 RIGQ13278 110 aa10.69□□□□□ -0.7
PCDHGA6-201ENST00000517434 CCDC144NLQ6NUI1 221 aa10.69□□□□□ -0.7
PCDHGA6-201ENST00000517434 FDX2Q6P4F2 183 aa10.69□□□□□ -0.7
PCDHGA6-201ENST00000517434 ADAD2Q8NCV1 583 aaKnown RBP10.69□□□□□ -0.7
PCDHGA6-201ENST00000517434 OR1L4Q8NGR5 311 aa10.69□□□□□ -0.7
PCDHGA6-201ENST00000517434 SCARF2Q96GP6 870 aaPredicted RBP10.69□□□□□ -0.7
PCDHGA6-201ENST00000517434 OR2A7Q96R45 310 aa10.69□□□□□ -0.7
PCDHGA6-201ENST00000517434 VSIG4Q9Y279 399 aa10.69□□□□□ -0.7
PCDHGA6-201ENST00000517434 AHCTF1Q8WYP5 2266 aa10.69□□□□□ -0.7
PCDHGA6-201ENST00000517434 TMEM210A6NLX4 147 aa10.69□□□□□ -0.7
PCDHGA6-201ENST00000517434 PITX3O75364 302 aa10.69□□□□□ -0.7
PCDHGA6-201ENST00000517434 HOXA5P20719 270 aa10.69□□□□□ -0.7
PCDHGA6-201ENST00000517434 C16orf47Q6ZP98 133 aaPredicted RBP10.69□□□□□ -0.7
PCDHGA6-201ENST00000517434 OR4C45A6NMZ5 311 aa10.69□□□□□ -0.7
PCDHGA6-201ENST00000517434 F2RL2O00254 374 aa10.69□□□□□ -0.7
PCDHGA6-201ENST00000517434 HERVK_113P61574 105 aa10.69□□□□□ -0.7
PCDHGA6-201ENST00000517434 NIT1Q86X76 327 aa10.69□□□□□ -0.7
PCDHGA6-201ENST00000517434 SFXN3Q9BWM7 321 aa10.69□□□□□ -0.7
PCDHGA6-201ENST00000517434 AAMDCQ9H7C9 122 aa10.69□□□□□ -0.7
PCDHGA6-201ENST00000517434 GPR35Q9HC97 309 aa10.69□□□□□ -0.7
PCDHGA6-201ENST00000517434 LOC390937A0A1W2PQ73 354 aa10.69□□□□□ -0.7
PCDHGA6-201ENST00000517434 H0YL77 283 aa10.69□□□□□ -0.7
PCDHGA6-201ENST00000517434 UQCRFS1P47985 274 aa10.69□□□□□ -0.7
PCDHGA6-201ENST00000517434 Q5BKY6 102 aa10.69□□□□□ -0.7
PCDHGA6-201ENST00000517434 DMRTC1Q5HYR2 192 aa10.69□□□□□ -0.7
PCDHGA6-201ENST00000517434 CBLN3Q6UW01 205 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms