RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 GSTT2BP0CG30 244 aa12.2□□□□□ -0.46
NUP54-213ENST00000513352 PRRX1P54821 245 aa12.2□□□□□ -0.46
NUP54-213ENST00000513352 SCGB2A2Q13296 93 aa12.2□□□□□ -0.46
NUP54-213ENST00000513352 SPANXN2Q5MJ10 180 aa12.2□□□□□ -0.46
NUP54-213ENST00000513352 STEAP3Q658P3 488 aa12.2□□□□□ -0.46
NUP54-213ENST00000513352 PYHIN1Q6K0P9 492 aa12.2□□□□□ -0.46
NUP54-213ENST00000513352 BEST4Q8NFU0 473 aa12.2□□□□□ -0.46
NUP54-213ENST00000513352 OR52M1Q8NGK5 317 aa12.2□□□□□ -0.46
NUP54-213ENST00000513352 OR4A4PQ8NGN8 299 aa12.2□□□□□ -0.46
NUP54-213ENST00000513352 OR6Q1Q8NGQ2 317 aa12.2□□□□□ -0.46
NUP54-213ENST00000513352 OCSTAMPQ9BR26 566 aa12.2□□□□□ -0.46
NUP54-213ENST00000513352 GINS4Q9BRT9 223 aa12.2□□□□□ -0.46
NUP54-213ENST00000513352 SCPEP1Q9HB40 452 aa12.2□□□□□ -0.46
NUP54-213ENST00000513352 PTTG2Q9NZH5 202 aa12.2□□□□□ -0.46
NUP54-213ENST00000513352 JPT1Q9UK76 154 aa12.2□□□□□ -0.46
NUP54-213ENST00000513352 MTORP42345 2549 aa12.19□□□□□ -0.46
NUP54-213ENST00000513352 IGKV1D-8A0A087WSZ0 117 aa12.19□□□□□ -0.46
NUP54-213ENST00000513352 A0A1W2PPE3 182 aa12.19□□□□□ -0.46
NUP54-213ENST00000513352 CRLF1O75462 422 aa12.19□□□□□ -0.46
NUP54-213ENST00000513352 RGS11O94810 467 aa12.19□□□□□ -0.46
NUP54-213ENST00000513352 SAA4P35542 130 aa12.19□□□□□ -0.46
NUP54-213ENST00000513352 LOXL3P58215 753 aa12.19□□□□□ -0.46
NUP54-213ENST00000513352 HTD2P86397 168 aa12.19□□□□□ -0.46
NUP54-213ENST00000513352 PYDC2Q56P42 97 aa12.19□□□□□ -0.46
NUP54-213ENST00000513352 IGSF11Q5DX21 431 aa12.19□□□□□ -0.46
NUP54-213ENST00000513352 UTF1Q5T230 341 aa12.19□□□□□ -0.46
NUP54-213ENST00000513352 HOGA1Q86XE5 327 aa12.19□□□□□ -0.46
NUP54-213ENST00000513352 OR52I2Q8NH67 350 aa12.19□□□□□ -0.46
NUP54-213ENST00000513352 OR9G1Q8NH87 305 aa12.19□□□□□ -0.46
NUP54-213ENST00000513352 ZNF596Q8TC21 504 aa12.19□□□□□ -0.46
NUP54-213ENST00000513352 FCAMRQ8WWV6 532 aa12.19□□□□□ -0.46
NUP54-213ENST00000513352 ABHD1Q96SE0 405 aa12.19□□□□□ -0.46
NUP54-213ENST00000513352 OR1A1Q9P1Q5 309 aa12.19□□□□□ -0.46
NUP54-213ENST00000513352 ZNRD1Q9P1U0 126 aa12.19□□□□□ -0.46
NUP54-213ENST00000513352 RABL2AQ9UBK7 228 aaPredicted RBP12.19□□□□□ -0.46
NUP54-213ENST00000513352 RABL2BQ9UNT1 228 aa12.19□□□□□ -0.46
NUP54-213ENST00000513352 PSG11Q9UQ72 335 aa12.19□□□□□ -0.46
NUP54-213ENST00000513352 FAM96BQ9Y3D0 163 aa12.19□□□□□ -0.46
NUP54-213ENST00000513352 NSD1Q96L73 2696 aaPredicted RBP12.18□□□□□ -0.46
NUP54-213ENST00000513352 FN1P02751 2386 aaKnown RBP12.18□□□□□ -0.46
NUP54-213ENST00000513352 SULT1C2O00338 296 aa12.18□□□□□ -0.46
NUP54-213ENST00000513352 TPPPO94811 219 aa12.18□□□□□ -0.46
NUP54-213ENST00000513352 ZBTB25P24278 435 aa12.18□□□□□ -0.46
NUP54-213ENST00000513352 CD34P28906 385 aa12.18□□□□□ -0.46
NUP54-213ENST00000513352 RCVRNP35243 200 aa12.18□□□□□ -0.46
NUP54-213ENST00000513352 CEACAM6P40199 344 aa12.18□□□□□ -0.46
NUP54-213ENST00000513352 BPIFB3P59826 476 aa12.18□□□□□ -0.46
NUP54-213ENST00000513352 DGCR2P98153 550 aa12.18□□□□□ -0.46
NUP54-213ENST00000513352 SRSF7Q16629 238 aaKnown RBP eCLIP12.18□□□□□ -0.46
NUP54-213ENST00000513352 MIDNQ504T8 468 aa12.18□□□□□ -0.46
NUP54-213ENST00000513352 ZNF626Q68DY1 528 aa12.18□□□□□ -0.46
NUP54-213ENST00000513352 Q6ZS49 121 aa12.18□□□□□ -0.46
NUP54-213ENST00000513352 BCL6BQ8N143 479 aaPredicted RBP12.18□□□□□ -0.46
NUP54-213ENST00000513352 OR11H6Q8NGC7 330 aa12.18□□□□□ -0.46
NUP54-213ENST00000513352 OR10X1Q8NGY0 326 aa12.18□□□□□ -0.46
NUP54-213ENST00000513352 OR10J5Q8NHC4 309 aa12.18□□□□□ -0.46
NUP54-213ENST00000513352 GPX8Q8TED1 209 aa12.18□□□□□ -0.46
NUP54-213ENST00000513352 CABLES2Q9BTV7 478 aa12.18□□□□□ -0.46
NUP54-213ENST00000513352 OCEL1Q9H607 264 aa12.18□□□□□ -0.46
NUP54-213ENST00000513352 ANXA10Q9UJ72 324 aa12.18□□□□□ -0.46
NUP54-213ENST00000513352 AMMECR1Q9Y4X0 333 aaPredicted RBP12.18□□□□□ -0.46
NUP54-213ENST00000513352 SOX21Q9Y651 276 aaPredicted RBP12.18□□□□□ -0.46
NUP54-213ENST00000513352 A0A087X0M5 115 aa12.17□□□□□ -0.46
NUP54-213ENST00000513352 IGKV1-6A0A0C4DH72 117 aa12.17□□□□□ -0.46
NUP54-213ENST00000513352 A0A0U1RQK1 487 aa12.17□□□□□ -0.46
NUP54-213ENST00000513352 A0A1B0GX30 115 aa12.17□□□□□ -0.46
NUP54-213ENST00000513352 ODF3BA8MYP8 253 aa12.17□□□□□ -0.46
NUP54-213ENST00000513352 J3QR06 171 aa12.17□□□□□ -0.46
NUP54-213ENST00000513352 RBBP9O75884 186 aa12.17□□□□□ -0.46
NUP54-213ENST00000513352 OR3A3P47888 321 aa12.17□□□□□ -0.46
NUP54-213ENST00000513352 MRPS10P82664 201 aaKnown RBP12.17□□□□□ -0.46
NUP54-213ENST00000513352 HERPUD1Q15011 391 aa12.17□□□□□ -0.46
NUP54-213ENST00000513352 MORN2Q502X0 79 aa12.17□□□□□ -0.46
NUP54-213ENST00000513352 LHFPL4Q7Z7J7 247 aa12.17□□□□□ -0.46
NUP54-213ENST00000513352 CCDC190Q86UF4 302 aa12.17□□□□□ -0.46
NUP54-213ENST00000513352 SNAPC3Q92966 411 aa12.17□□□□□ -0.46
NUP54-213ENST00000513352 SLC6A7Q99884 636 aa12.17□□□□□ -0.46
NUP54-213ENST00000513352 MMP28Q9H239 520 aa12.17□□□□□ -0.46
NUP54-213ENST00000513352 MDFIC2A0A1B0GVS7 189 aa12.16□□□□□ -0.46
NUP54-213ENST00000513352 GABARAPH6UMI1 98 aa12.16□□□□□ -0.46
NUP54-213ENST00000513352 SLC31A2O15432 143 aa12.16□□□□□ -0.46
NUP54-213ENST00000513352 YPEL1O60688 119 aa12.16□□□□□ -0.46
NUP54-213ENST00000513352 CTXN2P0C2S0 81 aa12.16□□□□□ -0.46
NUP54-213ENST00000513352 FAM157CP0CG43 387 aa12.16□□□□□ -0.46
NUP54-213ENST00000513352 HLA-DMAP28067 261 aa12.16□□□□□ -0.46
NUP54-213ENST00000513352 HTR1DP28221 377 aa12.16□□□□□ -0.46
NUP54-213ENST00000513352 TAS2R46P59540 309 aa12.16□□□□□ -0.46
NUP54-213ENST00000513352 ACTBP60709 375 aa12.16□□□□□ -0.46
NUP54-213ENST00000513352 ACTG1P63261 375 aa12.16□□□□□ -0.46
NUP54-213ENST00000513352 HLA-DRB5Q30154 266 aa12.16□□□□□ -0.46
NUP54-213ENST00000513352 PLA1AQ53H76 456 aa12.16□□□□□ -0.46
NUP54-213ENST00000513352 BEND2Q8NDZ0 799 aa12.16□□□□□ -0.46
NUP54-213ENST00000513352 OR2AK2Q8NG84 335 aa12.16□□□□□ -0.46
NUP54-213ENST00000513352 OR5H2Q8NGV7 314 aa12.16□□□□□ -0.46
NUP54-213ENST00000513352 SMIM4Q8WVI0 70 aa12.16□□□□□ -0.46
NUP54-213ENST00000513352 C17orf50Q8WW18 174 aa12.16□□□□□ -0.46
NUP54-213ENST00000513352 ZDHHC16Q969W1 377 aa12.16□□□□□ -0.46
NUP54-213ENST00000513352 YPEL2Q96QA6 119 aa12.16□□□□□ -0.46
NUP54-213ENST00000513352 ABHD14AQ9BUJ0 271 aa12.16□□□□□ -0.46
NUP54-213ENST00000513352 NECAP2Q9NVZ3 263 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms