RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 DENRO43583 198 aaKnown RBP2.92□□□□□ -1.94
HMGB1P47-201ENST00000511281 ARL6IP5O75915 188 aa2.92□□□□□ -1.94
HMGB1P47-201ENST00000511281 FBP1P09467 338 aa2.92□□□□□ -1.94
HMGB1P47-201ENST00000511281 ADORA1P30542 326 aa2.92□□□□□ -1.94
HMGB1P47-201ENST00000511281 RPS11P62280 158 aaKnown RBP eCLIP2.92□□□□□ -1.94
HMGB1P47-201ENST00000511281 EBLN2Q6P2I7 272 aa2.92□□□□□ -1.94
HMGB1P47-201ENST00000511281 LYPD1Q8N2G4 141 aa2.92□□□□□ -1.94
HMGB1P47-201ENST00000511281 OR1P1Q8NH06 330 aa2.92□□□□□ -1.94
HMGB1P47-201ENST00000511281 OR10D3Q8NH80 312 aa2.92□□□□□ -1.94
HMGB1P47-201ENST00000511281 SPPL2BQ8TCT7 592 aa2.92□□□□□ -1.94
HMGB1P47-201ENST00000511281 UBE2WQ96B02 151 aa2.92□□□□□ -1.94
HMGB1P47-201ENST00000511281 FAM206AQ9NX38 181 aa2.92□□□□□ -1.94
HMGB1P47-201ENST00000511281 RPUSD1Q9UJJ7 312 aaKnown RBP2.92□□□□□ -1.94
HMGB1P47-201ENST00000511281 ZNF443Q9Y2A4 671 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P47-201ENST00000511281 LINC00588Q9Y4M8 146 aa2.92□□□□□ -1.94
HMGB1P47-201ENST00000511281 SNX10Q9Y5X0 201 aa2.92□□□□□ -1.94
HMGB1P47-201ENST00000511281 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.92□□□□□ -1.94
HMGB1P47-201ENST00000511281 MYO5BQ9ULV0 1848 aa2.91□□□□□ -1.94
HMGB1P47-201ENST00000511281 A0A1W2PQ67 120 aa2.91□□□□□ -1.94
HMGB1P47-201ENST00000511281 ARGFXA6NJG6 315 aa2.91□□□□□ -1.94
HMGB1P47-201ENST00000511281 VGLL3A8MV65 326 aa2.91□□□□□ -1.94
HMGB1P47-201ENST00000511281 SSNA1O43805 119 aa2.91□□□□□ -1.94
HMGB1P47-201ENST00000511281 APOEP02649 317 aa2.91□□□□□ -1.94
HMGB1P47-201ENST00000511281 LINC00614P0C842 121 aa2.91□□□□□ -1.94
HMGB1P47-201ENST00000511281 PSMB3P49720 205 aa2.91□□□□□ -1.94
HMGB1P47-201ENST00000511281 FOXA1P55317 472 aa2.91□□□□□ -1.94
HMGB1P47-201ENST00000511281 SMAGPQ0VAQ4 97 aa2.91□□□□□ -1.94
HMGB1P47-201ENST00000511281 TRMT12Q53H54 448 aaKnown RBP2.91□□□□□ -1.94
HMGB1P47-201ENST00000511281 COQ5Q5HYK3 327 aa2.91□□□□□ -1.94
HMGB1P47-201ENST00000511281 TCF23Q7RTU1 214 aa2.91□□□□□ -1.94
HMGB1P47-201ENST00000511281 LYZL2Q7Z4W2 148 aa2.91□□□□□ -1.94
HMGB1P47-201ENST00000511281 DNAAF3Q8N9W5 541 aa2.91□□□□□ -1.94
HMGB1P47-201ENST00000511281 TMEM75Q8N9X5 138 aa2.91□□□□□ -1.94
HMGB1P47-201ENST00000511281 SLC37A2Q8TED4 501 aa2.91□□□□□ -1.94
HMGB1P47-201ENST00000511281 OR7D2Q96RA2 312 aa2.91□□□□□ -1.94
HMGB1P47-201ENST00000511281 MROQ9BYG7 248 aa2.91□□□□□ -1.94
HMGB1P47-201ENST00000511281 PARVAQ9NVD7 372 aa2.91□□□□□ -1.94
HMGB1P47-201ENST00000511281 NPATQ14207 1427 aa2.91□□□□□ -1.94
HMGB1P47-201ENST00000511281 MRC2Q9UBG0 1479 aa2.9□□□□□ -1.94
HMGB1P47-201ENST00000511281 COL1A2P08123 1366 aa2.9□□□□□ -1.94
HMGB1P47-201ENST00000511281 PRR14LQ5THK1 2151 aa2.9□□□□□ -1.94
HMGB1P47-201ENST00000511281 TRBV24-1A0A075B6N3 115 aa2.9□□□□□ -1.95
HMGB1P47-201ENST00000511281 TEX50A0A1B0GTY4 177 aa2.9□□□□□ -1.95
HMGB1P47-201ENST00000511281 C4orf51C9J302 202 aa2.9□□□□□ -1.95
HMGB1P47-201ENST00000511281 C15orf65H3BRN8 121 aa2.9□□□□□ -1.95
HMGB1P47-201ENST00000511281 RTL8CO15255 209 aa2.9□□□□□ -1.95
HMGB1P47-201ENST00000511281 HBZP02008 142 aa2.9□□□□□ -1.95
HMGB1P47-201ENST00000511281 GYPCP04921 128 aa2.9□□□□□ -1.95
HMGB1P47-201ENST00000511281 S100A6P06703 90 aa2.9□□□□□ -1.95
HMGB1P47-201ENST00000511281 CTLA4P16410 223 aa2.9□□□□□ -1.95
HMGB1P47-201ENST00000511281 IL15RAQ13261 267 aa2.9□□□□□ -1.95
HMGB1P47-201ENST00000511281 BCL2A1Q16548 175 aa2.9□□□□□ -1.95
HMGB1P47-201ENST00000511281 PAGE2Q7Z2X7 111 aa2.9□□□□□ -1.95
HMGB1P47-201ENST00000511281 RTBDNQ9BSG5 229 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P47-201ENST00000511281 ZNF230Q9UIE0 474 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P47-201ENST00000511281 R4GN34 69 aa2.9□□□□□ -1.95
HMGB1P47-201ENST00000511281 V9GYY5 206 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P47-201ENST00000511281 ZBED9Q6R2W3 1325 aa2.9□□□□□ -1.95
HMGB1P47-201ENST00000511281 SHANK1Q9Y566 2161 aa2.9□□□□□ -1.95
HMGB1P47-201ENST00000511281 IGKV1-12A0A0C4DH73 117 aa2.89□□□□□ -1.95
HMGB1P47-201ENST00000511281 LRRN3E7EW58 273 aa2.89□□□□□ -1.95
HMGB1P47-201ENST00000511281 H0Y980 276 aa2.89□□□□□ -1.95
HMGB1P47-201ENST00000511281 M0QZ92 97 aa2.89□□□□□ -1.95
HMGB1P47-201ENST00000511281 COPEO14579 308 aa2.89□□□□□ -1.95
HMGB1P47-201ENST00000511281 IGKV1D-12P01611 117 aa2.89□□□□□ -1.95
HMGB1P47-201ENST00000511281 IGLV3-19P01714 112 aa2.89□□□□□ -1.95
HMGB1P47-201ENST00000511281 ATP5G1P05496 136 aa2.89□□□□□ -1.95
HMGB1P47-201ENST00000511281 GUSBP08236 651 aa2.89□□□□□ -1.95
HMGB1P47-201ENST00000511281 S100A2P29034 98 aa2.89□□□□□ -1.95
HMGB1P47-201ENST00000511281 KLF3P57682 345 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P47-201ENST00000511281 DHRS2Q13268 280 aa2.89□□□□□ -1.95
HMGB1P47-201ENST00000511281 RGS21Q2M5E4 152 aa2.89□□□□□ -1.95
HMGB1P47-201ENST00000511281 MESTQ5EB52 335 aa2.89□□□□□ -1.95
HMGB1P47-201ENST00000511281 C10orf91Q5T1B1 145 aa2.89□□□□□ -1.95
HMGB1P47-201ENST00000511281 ZNF660Q6AZW8 331 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P47-201ENST00000511281 KRTAP5-1Q6L8H4 278 aa2.89□□□□□ -1.95
HMGB1P47-201ENST00000511281 PIGXQ8TBF5 258 aa2.89□□□□□ -1.95
HMGB1P47-201ENST00000511281 HAVCR2Q8TDQ0 301 aa2.89□□□□□ -1.95
HMGB1P47-201ENST00000511281 CYGBQ8WWM9 190 aa2.89□□□□□ -1.95
HMGB1P47-201ENST00000511281 TLCD1Q96CP7 247 aa2.89□□□□□ -1.95
HMGB1P47-201ENST00000511281 ACY3Q96HD9 319 aa2.89□□□□□ -1.95
HMGB1P47-201ENST00000511281 OR5V1Q9UGF6 321 aa2.89□□□□□ -1.95
HMGB1P47-201ENST00000511281 PHLDA3Q9Y5J5 127 aa2.89□□□□□ -1.95
HMGB1P47-201ENST00000511281 FANCD2Q9BXW9 1451 aa2.89□□□□□ -1.95
HMGB1P47-201ENST00000511281 CEP164Q9UPV0 1460 aa2.89□□□□□ -1.95
HMGB1P47-201ENST00000511281 C9orf84Q5VXU9 1444 aa2.88□□□□□ -1.95
HMGB1P47-201ENST00000511281 IGKV1D-37A0A075B6S9 117 aa2.88□□□□□ -1.95
HMGB1P47-201ENST00000511281 B4DEV8 164 aa2.88□□□□□ -1.95
HMGB1P47-201ENST00000511281 F5H5T6 163 aa2.88□□□□□ -1.95
HMGB1P47-201ENST00000511281 CXCR6O00574 342 aa2.88□□□□□ -1.95
HMGB1P47-201ENST00000511281 SH2D1AO60880 128 aa2.88□□□□□ -1.95
HMGB1P47-201ENST00000511281 IGLV3-27P01718 113 aa2.88□□□□□ -1.95
HMGB1P47-201ENST00000511281 OPN1SWP03999 348 aa2.88□□□□□ -1.95
HMGB1P47-201ENST00000511281 CRYBA1P05813 215 aa2.88□□□□□ -1.95
HMGB1P47-201ENST00000511281 GABARAPL2P60520 117 aa2.88□□□□□ -1.95
HMGB1P47-201ENST00000511281 EBPQ15125 230 aaKnown RBP2.88□□□□□ -1.95
HMGB1P47-201ENST00000511281 PYCR3Q53H96 274 aa2.88□□□□□ -1.95
HMGB1P47-201ENST00000511281 OGFRL1Q5TC84 451 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P47-201ENST00000511281 LCN8Q6JVE9 175 aa2.88□□□□□ -1.95
HMGB1P47-201ENST00000511281 TNFAIP8L2Q6P589 184 aaPredicted RBP2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms