RNA–Protein interactions for RNA: ENST00000509277.5

LIMCH1-209, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2 BASIC

Gene LIMCH1, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-209ENST00000509277 DHRS7CA6NNS2 312 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 H2AFB1P0C5Y9 115 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 OR4A8P0C604 315 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 KIR3DL2P43630 455 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 FGF8P55075 233 aaPredicted RBP7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 GGTLC2Q14390 218 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 CDSNQ15517 529 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 C11orf42Q8N5U0 333 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 OR2G3Q8NGZ4 309 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 RNF133Q8WVZ7 376 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 FAAP24Q9BTP7 215 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 TMEM208Q9BTX3 173 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 SNHG12Q9BXW3 62 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 METTL9Q9H1A3 318 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 SLC35B3Q9H1N7 401 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 C19orf12Q9NSK7 152 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 R4GMQ9 66 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 CRYBG3Q68DQ2 2970 aa7.44□□□□□ -1.22
LIMCH1-209ENST00000509277 A0A1W2PP11 408 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 NPIPB13A6NJU9 1138 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 NPIPB4C9JG80 1138 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 C16orf97H3BN30 126 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 CTDSPLO15194 276 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 CA11O75493 328 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 CRTAPO75718 401 aaPredicted RBP7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 SNAPC5O75971 98 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 ERVFRD-1P60508 538 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 HIST3H3Q16695 136 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 RIPPLY2Q5TAB7 128 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 BIVMQ86UB2 503 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 OR5H2Q8NGV7 314 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 ERGIC1Q969X5 290 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 C4orf45Q96LM5 186 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 E9PLN8 166 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 GPRIN2O60269 458 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 IGHV2-5P01817 119 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 CST2P09228 141 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 CA7P43166 264 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 HGFACQ04756 655 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 EGR3Q06889 387 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 PPA1Q15181 289 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 RAB35Q15286 201 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 GABRA6Q16445 453 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 TBC1D28Q2M2D7 210 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 MST1LQ2TV78 715 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 BRICD5Q6PL45 260 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 CLEC18BQ6UXF7 455 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 C22orf34Q6ZV56 151 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 SSX7Q7RTT5 188 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 RPUSD4Q96CM3 377 aaKnown RBP7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 GPHA2Q96T91 129 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 OR10A2Q9H208 303 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 HHLA2Q9UM44 414 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 STARD10Q9Y365 291 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 CCDC168Q8NDH2 2452 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 ZNF320A2RRD8 509 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 C3orf80F5H4A9 247 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 PPIHO43447 177 aaKnown RBP7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 DFFBO76075 338 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 CYCSP99999 105 aaKnown RBP7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 RUNX1Q01196 453 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 PAX5Q02548 391 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 ABCA11PQ4W5N1 156 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 SPIN3Q5JUX0 258 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 TMEM211Q6ICI0 200 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 BCL2L2Q92843 193 aaPredicted RBP7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 SFXN3Q9BWM7 321 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 PIGLQ9Y2B2 252 aa7.43□□□□□ -1.22
LIMCH1-209ENST00000509277 A8MXE2 369 aa7.42□□□□□ -1.22
LIMCH1-209ENST00000509277 PET100P0DJ07 73 aa7.42□□□□□ -1.22
LIMCH1-209ENST00000509277 SELEP16581 610 aa7.42□□□□□ -1.22
LIMCH1-209ENST00000509277 TIMP3P35625 211 aa7.42□□□□□ -1.22
LIMCH1-209ENST00000509277 GRB2P62993 217 aaKnown RBP7.42□□□□□ -1.22
LIMCH1-209ENST00000509277 CCL20P78556 96 aa7.42□□□□□ -1.22
LIMCH1-209ENST00000509277 SYS1Q8N2H4 156 aa7.42□□□□□ -1.22
LIMCH1-209ENST00000509277 VKORC1Q9BQB6 163 aa7.42□□□□□ -1.22
LIMCH1-209ENST00000509277 SYT3Q9BQG1 590 aa7.42□□□□□ -1.22
LIMCH1-209ENST00000509277 NICN1Q9BSH3 213 aa7.42□□□□□ -1.22
LIMCH1-209ENST00000509277 OR2J1Q9GZK6 312 aa7.42□□□□□ -1.22
LIMCH1-209ENST00000509277 SLC2A8Q9NY64 477 aa7.42□□□□□ -1.22
LIMCH1-209ENST00000509277 C14orf166Q9Y224 244 aaKnown RBP7.42□□□□□ -1.22
LIMCH1-209ENST00000509277 ATP23Q9Y6H3 246 aa7.42□□□□□ -1.22
LIMCH1-209ENST00000509277 HELZ2Q9BYK8 2649 aaKnown RBP7.42□□□□□ -1.22
LIMCH1-209ENST00000509277 A0A1B0GUS0 222 aa7.42□□□□□ -1.22
LIMCH1-209ENST00000509277 A0A1B0GWJ7 208 aa7.42□□□□□ -1.22
LIMCH1-209ENST00000509277 J3QRE1 110 aa7.42□□□□□ -1.22
LIMCH1-209ENST00000509277 CRYAAP02489 173 aa7.42□□□□□ -1.22
LIMCH1-209ENST00000509277 TTRP02766 147 aa7.42□□□□□ -1.22
LIMCH1-209ENST00000509277 EPHA1P21709 976 aa7.42□□□□□ -1.22
LIMCH1-209ENST00000509277 ARR3P36575 388 aa7.42□□□□□ -1.22
LIMCH1-209ENST00000509277 MALLQ13021 153 aa7.42□□□□□ -1.22
LIMCH1-209ENST00000509277 PDCD1Q15116 288 aa7.42□□□□□ -1.22
LIMCH1-209ENST00000509277 CHRFAM7AQ494W8 412 aa7.42□□□□□ -1.22
LIMCH1-209ENST00000509277 ADGRE4PQ86SQ3 457 aa7.42□□□□□ -1.22
LIMCH1-209ENST00000509277 OR5L1Q8NGL2 311 aa7.42□□□□□ -1.22
LIMCH1-209ENST00000509277 OR10J5Q8NHC4 309 aa7.42□□□□□ -1.22
LIMCH1-209ENST00000509277 NEK7Q8TDX7 302 aa7.42□□□□□ -1.22
LIMCH1-209ENST00000509277 HIST1H2BLQ99880 126 aa7.42□□□□□ -1.22
LIMCH1-209ENST00000509277 RNF126Q9BV68 326 aa7.42□□□□□ -1.22
LIMCH1-209ENST00000509277 DNAJC4Q9NNZ3 241 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms