RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 ARFRP1Q13795 201 aa12.13□□□□□ -0.47
RNF4-210ENST00000508235 CTF1Q16619 201 aa12.13□□□□□ -0.47
RNF4-210ENST00000508235 STEAP3Q658P3 488 aa12.13□□□□□ -0.47
RNF4-210ENST00000508235 LIAT1Q6ZQX7 453 aa12.13□□□□□ -0.47
RNF4-210ENST00000508235 LINC00311Q8N616 119 aa12.13□□□□□ -0.47
RNF4-210ENST00000508235 UBALD1Q8TB05 177 aa12.13□□□□□ -0.47
RNF4-210ENST00000508235 GCDHQ92947 438 aaPredicted RBP12.13□□□□□ -0.47
RNF4-210ENST00000508235 LEAP2Q969E1 77 aa12.13□□□□□ -0.47
RNF4-210ENST00000508235 RPEQ96AT9 228 aa12.13□□□□□ -0.47
RNF4-210ENST00000508235 OCSTAMPQ9BR26 566 aa12.13□□□□□ -0.47
RNF4-210ENST00000508235 Q9N2K0 584 aa12.13□□□□□ -0.47
RNF4-210ENST00000508235 RAB18Q9NP72 206 aa12.13□□□□□ -0.47
RNF4-210ENST00000508235 DIABLOQ9NR28 239 aa12.13□□□□□ -0.47
RNF4-210ENST00000508235 KCNK7Q9Y2U2 307 aa12.13□□□□□ -0.47
RNF4-210ENST00000508235 IGHV3-43A0A0B4J1X8 118 aa12.12□□□□□ -0.47
RNF4-210ENST00000508235 TMEM89A2RUT3 159 aa12.12□□□□□ -0.47
RNF4-210ENST00000508235 NOL3O60936 208 aaKnown RBP12.12□□□□□ -0.47
RNF4-210ENST00000508235 IGHV3-7P01780 117 aa12.12□□□□□ -0.47
RNF4-210ENST00000508235 LPLP06858 475 aa12.12□□□□□ -0.47
RNF4-210ENST00000508235 GSTP1P09211 210 aaKnown RBP12.12□□□□□ -0.47
RNF4-210ENST00000508235 IGHV3-43DP0DP04 118 aa12.12□□□□□ -0.47
RNF4-210ENST00000508235 KIR2DS4P43632 304 aa12.12□□□□□ -0.47
RNF4-210ENST00000508235 RORCP51449 518 aa12.12□□□□□ -0.47
RNF4-210ENST00000508235 HLA-DRB3P79483 266 aa12.12□□□□□ -0.47
RNF4-210ENST00000508235 KIR2DS1Q14954 304 aa12.12□□□□□ -0.47
RNF4-210ENST00000508235 LDLRAD2Q5SZI1 272 aa12.12□□□□□ -0.47
RNF4-210ENST00000508235 TPTE2P1Q5T6R2 138 aa12.12□□□□□ -0.47
RNF4-210ENST00000508235 DYNAPQ8N1N2 210 aa12.12□□□□□ -0.47
RNF4-210ENST00000508235 OR5H6Q8NGV6 325 aa12.12□□□□□ -0.47
RNF4-210ENST00000508235 RAB2BQ8WUD1 216 aa12.12□□□□□ -0.47
RNF4-210ENST00000508235 ACOT12Q8WYK0 555 aa12.12□□□□□ -0.47
RNF4-210ENST00000508235 AP3S1Q92572 193 aa12.12□□□□□ -0.47
RNF4-210ENST00000508235 TOMM40LQ969M1 308 aa12.12□□□□□ -0.47
RNF4-210ENST00000508235 BCL7BQ9BQE9 202 aa12.12□□□□□ -0.47
RNF4-210ENST00000508235 HDHD3Q9BSH5 251 aaPredicted RBP12.12□□□□□ -0.47
RNF4-210ENST00000508235 PITPNC1Q9UKF7 332 aa12.12□□□□□ -0.47
RNF4-210ENST00000508235 FAM181BA6NEQ2 426 aa12.11□□□□□ -0.47
RNF4-210ENST00000508235 TRDCB7Z8K6 153 aa12.11□□□□□ -0.47
RNF4-210ENST00000508235 LY6LH3BQJ8 138 aa12.11□□□□□ -0.47
RNF4-210ENST00000508235 GPR137BO60478 399 aa12.11□□□□□ -0.47
RNF4-210ENST00000508235 YPEL1O60688 119 aa12.11□□□□□ -0.47
RNF4-210ENST00000508235 FCGR3AP08637 254 aa12.11□□□□□ -0.47
RNF4-210ENST00000508235 HKR1P10072 659 aa12.11□□□□□ -0.47
RNF4-210ENST00000508235 RAB7AP51149 207 aa12.11□□□□□ -0.47
RNF4-210ENST00000508235 TMBIM6P55061 237 aa12.11□□□□□ -0.47
RNF4-210ENST00000508235 FOXL1Q12952 345 aa12.11□□□□□ -0.47
RNF4-210ENST00000508235 SRSF7Q16629 238 aaKnown RBP eCLIP12.11□□□□□ -0.47
RNF4-210ENST00000508235 PNLIPRP3Q17RR3 467 aa12.11□□□□□ -0.47
RNF4-210ENST00000508235 CDNFQ49AH0 187 aa12.11□□□□□ -0.47
RNF4-210ENST00000508235 MORN2Q502X0 79 aa12.11□□□□□ -0.47
RNF4-210ENST00000508235 UBE2NLQ5JXB2 153 aa12.11□□□□□ -0.47
RNF4-210ENST00000508235 LY6G6FQ5SQ64 297 aa12.11□□□□□ -0.47
RNF4-210ENST00000508235 UTF1Q5T230 341 aa12.11□□□□□ -0.47
RNF4-210ENST00000508235 HACD4Q5VWC8 232 aa12.11□□□□□ -0.47
RNF4-210ENST00000508235 OLFML2AQ68BL7 652 aa12.11□□□□□ -0.47
RNF4-210ENST00000508235 DTX3Q8N9I9 347 aa12.11□□□□□ -0.47
RNF4-210ENST00000508235 SPATA3Q8NHX4 192 aa12.11□□□□□ -0.47
RNF4-210ENST00000508235 IL1F10Q8WWZ1 152 aa12.11□□□□□ -0.47
RNF4-210ENST00000508235 SLC25A38Q96DW6 304 aa12.11□□□□□ -0.47
RNF4-210ENST00000508235 S100A16Q96FQ6 103 aaKnown RBP12.11□□□□□ -0.47
RNF4-210ENST00000508235 CYYR1Q96J86 154 aa12.11□□□□□ -0.47
RNF4-210ENST00000508235 YPEL2Q96QA6 119 aa12.11□□□□□ -0.47
RNF4-210ENST00000508235 NAA50Q9GZZ1 169 aaKnown RBP12.11□□□□□ -0.47
RNF4-210ENST00000508235 ABCG5Q9H222 651 aa12.11□□□□□ -0.47
RNF4-210ENST00000508235 DCSTAMPQ9H295 470 aa12.11□□□□□ -0.47
RNF4-210ENST00000508235 SVEP1Q4LDE5 3571 aa12.11□□□□□ -0.47
RNF4-210ENST00000508235 DTYMKP23919 212 aa12.1□□□□□ -0.47
RNF4-210ENST00000508235 ZBTB25P24278 435 aa12.1□□□□□ -0.47
RNF4-210ENST00000508235 PLA1AQ53H76 456 aa12.1□□□□□ -0.47
RNF4-210ENST00000508235 DHRS7BQ6IAN0 325 aaPredicted RBP12.1□□□□□ -0.47
RNF4-210ENST00000508235 MZT2AQ6P582 158 aa12.1□□□□□ -0.47
RNF4-210ENST00000508235 Q6ZPA2 131 aa12.1□□□□□ -0.47
RNF4-210ENST00000508235 SLC25A48Q6ZT89 311 aaKnown RBP12.1□□□□□ -0.47
RNF4-210ENST00000508235 CLVS1Q8IUQ0 354 aaPredicted RBP12.1□□□□□ -0.47
RNF4-210ENST00000508235 OR8H3Q8N146 312 aa12.1□□□□□ -0.47
RNF4-210ENST00000508235 OR52L2PQ8NGH6 319 aa12.1□□□□□ -0.47
RNF4-210ENST00000508235 OR10V1Q8NGI7 309 aa12.1□□□□□ -0.47
RNF4-210ENST00000508235 OR4A4PQ8NGN8 299 aa12.1□□□□□ -0.47
RNF4-210ENST00000508235 CMTM3Q96MX0 182 aa12.1□□□□□ -0.47
RNF4-210ENST00000508235 TCF19Q9Y242 345 aa12.1□□□□□ -0.47
RNF4-210ENST00000508235 A0A1W2PPE3 182 aa12.09□□□□□ -0.47
RNF4-210ENST00000508235 HSD17B6O14756 317 aa12.09□□□□□ -0.47
RNF4-210ENST00000508235 HSPA12AO43301 675 aa12.09□□□□□ -0.47
RNF4-210ENST00000508235 TXNL1O43396 289 aa12.09□□□□□ -0.47
RNF4-210ENST00000508235 DIRAS3O95661 229 aa12.09□□□□□ -0.47
RNF4-210ENST00000508235 GAPDHP04406 335 aaKnown RBP12.09□□□□□ -0.47
RNF4-210ENST00000508235 PAX6P26367 422 aa12.09□□□□□ -0.47
RNF4-210ENST00000508235 SOX6P35712 828 aa12.09□□□□□ -0.47
RNF4-210ENST00000508235 GNG2P59768 71 aa12.09□□□□□ -0.47
RNF4-210ENST00000508235 ZNF816Q0VGE8 651 aaPredicted RBP12.09□□□□□ -0.47
RNF4-210ENST00000508235 ZNF260Q3ZCT1 412 aa12.09□□□□□ -0.47
RNF4-210ENST00000508235 SAMD12Q8N8I0 201 aa12.09□□□□□ -0.47
RNF4-210ENST00000508235 ZNF439Q8NDP4 499 aa12.09□□□□□ -0.47
RNF4-210ENST00000508235 OR2AK2Q8NG84 335 aa12.09□□□□□ -0.47
RNF4-210ENST00000508235 OR4F5Q8NH21 305 aa12.09□□□□□ -0.47
RNF4-210ENST00000508235 PIFOQ8TCI5 191 aa12.09□□□□□ -0.47
RNF4-210ENST00000508235 ABHD14AQ9BUJ0 271 aa12.09□□□□□ -0.47
RNF4-210ENST00000508235 SLC23A1Q9UHI7 598 aa12.09□□□□□ -0.47
RNF4-210ENST00000508235 TRAV18A0A075B6X5 111 aa12.08□□□□□ -0.48
RNF4-210ENST00000508235 A0A1B0GUS0 222 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms