RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 SPIBQ01892 262 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 PRKCDQ05655 676 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 CHRNB3Q05901 458 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 PJVKQ0ZLH3 352 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 IL24Q13007 206 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 BTN1A1Q13410 526 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 ZNF181Q2M3W8 571 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 DNLZQ5SXM8 178 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 SPATA46Q5T0L3 261 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 OGFRL1Q5TC84 451 aaPredicted RBP4.01□□□□□ -1.77
NIPBL-205ENST00000505998 OR2T5Q6IEZ7 315 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 FAHD1Q6P587 224 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 TMPPEQ6ZT21 453 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 MBOAT2Q6ZWT7 520 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 COMMD7Q86VX2 200 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 GATSQ8NAP1 163 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 TMEM104Q8NE00 496 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 OR4K17Q8NGC6 315 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 OR2T29Q8NH02 315 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 MFSD8Q8NHS3 518 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 STOML3Q8TAV4 291 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 CNIH3Q8TBE1 160 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 CA5BP1Q8WTZ4 195 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 SFT2D1Q8WV19 159 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 SH3YL1Q96HL8 342 aaPredicted RBP4.01□□□□□ -1.77
NIPBL-205ENST00000505998 TPD52L3Q96J77 140 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 ZFP3Q96NJ6 502 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 SLC6A7Q99884 636 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 CITED1Q99966 193 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 DCUN1D5Q9BTE7 237 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 TOLLIPQ9H0E2 274 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 CACYBPQ9HB71 228 aaKnown RBP4.01□□□□□ -1.77
NIPBL-205ENST00000505998 NANSQ9NR45 359 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 ABCB10Q9NRK6 738 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 ASF1BQ9NVP2 202 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 MCUBQ9NWR8 336 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 USE1Q9NZ43 259 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 GNG12Q9UBI6 72 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 ZNF337Q9Y3M9 751 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 MAB21L2Q9Y586 359 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 FAM215AQ9Y5M1 114 aa4.01□□□□□ -1.77
NIPBL-205ENST00000505998 USP9YO00507 2555 aaPredicted RBP4□□□□□ -1.77
NIPBL-205ENST00000505998 TRAV36DV7A0A075B6V5 113 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 A0A0J9YW62 118 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 TMEM72A0PK05 275 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 GJE1A6NN92 205 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 DHRS7CA6NNS2 312 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 ZNF716A6NP11 495 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 TMEM238C9JI98 176 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 LRRN3E7EW58 273 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 SULT1C2O00338 296 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 CDC42EP2O14613 210 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 TRAF3IP2O43734 574 aaPredicted RBP4□□□□□ -1.77
NIPBL-205ENST00000505998 VAMP5O95183 116 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 CTXN2P0C2S0 81 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 ACSM4P0C7M7 580 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 GABRA1P14867 456 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 DTYMKP23919 212 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 PSMB6P28072 239 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 HSD11B1P28845 292 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 OPRM1P35372 400 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 TGFBR2P37173 567 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 CA7P43166 264 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 SERPINB10P48595 397 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 CEBPDP49716 269 aaPredicted RBP4□□□□□ -1.77
NIPBL-205ENST00000505998 SMIM11AP58511 58 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 AP3S2P59780 193 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 ACTBP60709 375 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 ACTA2P62736 377 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 ACTG1P63261 375 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 ACTG2P63267 376 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 ACTC1P68032 377 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 ACTA1P68133 377 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 FGL1Q08830 312 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 RAB40BQ12829 278 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 GPR176Q14439 515 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 GRK1Q15835 563 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 USF2Q15853 346 aaPredicted RBP4□□□□□ -1.77
NIPBL-205ENST00000505998 CDNFQ49AH0 187 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 PABPC1L2AQ5JQF8 200 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 FAM120AOSQ5T036 256 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 LCE3EQ5T5B0 92 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 C1orf140Q5VVS0 124 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 KDM4DQ6B0I6 523 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 ACSM5Q6NUN0 579 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 FAM71F2Q6NXP2 309 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 PGAP1Q75T13 922 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 HMGN2P46Q86SG4 172 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 ZNF679Q8IYX0 411 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 PACRGLQ8N7B6 248 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 Q8N7P7 452 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 LRRC75AQ8NAA5 344 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 ACBD4Q8NC06 268 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 BHLHE23Q8NDY6 225 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 OR4M2Q8NGB6 313 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 OR4K5Q8NGD3 323 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 OR2V1Q8NHB1 315 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 FAM57AQ8TBR7 257 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 RAB2BQ8WUD1 216 aa4□□□□□ -1.77
NIPBL-205ENST00000505998 MITD1Q8WV92 249 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms