RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 FAM90A20PA6NIJ5 464 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 FAM90A8PA6NJQ4 464 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 FAM90A7PA6NKC0 464 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 FAM90A22PA8MWA6 464 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 FAM90A12PA8MX19 464 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 FAM90A5PA8MXJ8 464 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 FAM90A23PA8MXZ1 464 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 M0R2Z0 102 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 MGST3O14880 152 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 SRSF10O75494 262 aaKnown RBP14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 FAM90A15PP0C7V4 464 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 FAM90A13PP0C7W8 464 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 FAM90A14PP0C7W9 464 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 FAM90A24PP0C7X0 464 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 COL8A1P27658 744 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 C1orf100Q5SVJ3 147 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 OR4C5Q8NGB2 326 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 LOXL4Q96JB6 756 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 ZNF488Q96MN9 340 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 ELF5Q9UKW6 265 aaPredicted RBP14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 LOC285556D6RIA3 1793 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 TRAV20A0A0B4J274 112 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 DAOP14920 347 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 TCL1AP56279 114 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 RPL31P62899 125 aaKnown RBP14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 TMEM255AQ5JRV8 349 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 SMIM10L1P0DMW3 83 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 SERF2P84101 59 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 LRP11Q86VZ4 500 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 MRPL30Q8TCC3 161 aaKnown RBP14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 SMIM10Q96HG1 83 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 OR51B2Q9Y5P1 312 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 ARID2Q68CP9 1835 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 ELOBQ15370 118 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 CCDC144NLQ6NUI1 221 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 ADAMTS17Q8TE56 1095 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 ADIPOR1Q96A54 375 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 NPAS1Q99742 590 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 TMUB1Q9BVT8 246 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 H1FOOQ8IZA3 346 aaPredicted RBP14.34□□□□□ -0.11
PCDHA1-203ENST00000504120 OR1K1Q8NGR3 316 aa14.34□□□□□ -0.11
PCDHA1-203ENST00000504120 TMEM191AQ9H0A3 160 aa14.34□□□□□ -0.11
PCDHA1-203ENST00000504120 UBTD1Q9HAC8 227 aa14.34□□□□□ -0.11
PCDHA1-203ENST00000504120 H0Y980 276 aa14.34□□□□□ -0.11
PCDHA1-203ENST00000504120 CELA2AP08217 269 aa14.34□□□□□ -0.11
PCDHA1-203ENST00000504120 FCARP24071 287 aa14.34□□□□□ -0.11
PCDHA1-203ENST00000504120 OR8I2Q8N0Y5 310 aa14.34□□□□□ -0.11
PCDHA1-203ENST00000504120 OR1L6Q8NGR2 347 aa14.34□□□□□ -0.11
PCDHA1-203ENST00000504120 BMPR1BO00238 502 aa14.34□□□□□ -0.11
PCDHA1-203ENST00000504120 DEDDO75618 318 aa14.34□□□□□ -0.11
PCDHA1-203ENST00000504120 CLDN14O95500 239 aa14.34□□□□□ -0.11
PCDHA1-203ENST00000504120 ORM1P02763 201 aa14.34□□□□□ -0.11
PCDHA1-203ENST00000504120 CSRP3P50461 194 aa14.34□□□□□ -0.11
PCDHA1-203ENST00000504120 SLC25A45Q8N413 288 aa14.34□□□□□ -0.11
PCDHA1-203ENST00000504120 ZNF596Q8TC21 504 aa14.34□□□□□ -0.11
PCDHA1-203ENST00000504120 AMELYQ99218 206 aa14.34□□□□□ -0.11
PCDHA1-203ENST00000504120 UCNP55089 124 aa14.34□□□□□ -0.11
PCDHA1-203ENST00000504120 PRO1933Q9H354 126 aa14.34□□□□□ -0.11
PCDHA1-203ENST00000504120 UFC1Q9Y3C8 167 aa14.34□□□□□ -0.11
PCDHA1-203ENST00000504120 TRBV5-7A0A0A0MS05 114 aa14.33□□□□□ -0.11
PCDHA1-203ENST00000504120 GAPDHP04406 335 aaKnown RBP14.33□□□□□ -0.11
PCDHA1-203ENST00000504120 CBY1Q9Y3M2 126 aa14.33□□□□□ -0.11
PCDHA1-203ENST00000504120 KCNMB2Q9Y691 235 aa14.33□□□□□ -0.11
PCDHA1-203ENST00000504120 K7N7A8 449 aa14.33□□□□□ -0.12
PCDHA1-203ENST00000504120 SEMA7AO75326 666 aa14.33□□□□□ -0.12
PCDHA1-203ENST00000504120 RPL29P47914 159 aaKnown RBP14.33□□□□□ -0.12
PCDHA1-203ENST00000504120 FHL5Q5TD97 284 aa14.33□□□□□ -0.12
PCDHA1-203ENST00000504120 PRR7Q8TB68 274 aa14.33□□□□□ -0.12
PCDHA1-203ENST00000504120 WASHC3Q9Y3C0 194 aa14.33□□□□□ -0.12
PCDHA1-203ENST00000504120 HIST3H3Q16695 136 aa14.33□□□□□ -0.12
PCDHA1-203ENST00000504120 KRTCAP3Q53RY4 240 aa14.33□□□□□ -0.12
PCDHA1-203ENST00000504120 EIF4E3Q8N5X7 224 aaKnown RBP14.33□□□□□ -0.12
PCDHA1-203ENST00000504120 GPR132Q9UNW8 380 aa14.33□□□□□ -0.12
PCDHA1-203ENST00000504120 PLXNA1Q9UIW2 1896 aa14.33□□□□□ -0.12
PCDHA1-203ENST00000504120 AHRRA9YTQ3 701 aa14.33□□□□□ -0.12
PCDHA1-203ENST00000504120 WFDC6Q9BQY6 131 aa14.33□□□□□ -0.12
PCDHA1-203ENST00000504120 HIST1H1EP10412 219 aaKnown RBP14.32□□□□□ -0.12
PCDHA1-203ENST00000504120 CD1BP29016 333 aa14.32□□□□□ -0.12
PCDHA1-203ENST00000504120 HOXA6P31267 233 aa14.32□□□□□ -0.12
PCDHA1-203ENST00000504120 NCMAPQ5T1S8 102 aa14.32□□□□□ -0.12
PCDHA1-203ENST00000504120 FDX2Q6P4F2 183 aa14.32□□□□□ -0.12
PCDHA1-203ENST00000504120 SMPD2O60906 423 aa14.32□□□□□ -0.12
PCDHA1-203ENST00000504120 GCSAMQ8N6F7 178 aa14.32□□□□□ -0.12
PCDHA1-203ENST00000504120 WDR31Q8NA23 367 aa14.32□□□□□ -0.12
PCDHA1-203ENST00000504120 TMEM116Q8NCL8 245 aa14.32□□□□□ -0.12
PCDHA1-203ENST00000504120 CTHRC1Q96CG8 243 aa14.32□□□□□ -0.12
PCDHA1-203ENST00000504120 KCNE5Q9UJ90 142 aa14.32□□□□□ -0.12
PCDHA1-203ENST00000504120 C4orf51C9J302 202 aa14.32□□□□□ -0.12
PCDHA1-203ENST00000504120 PRSS1P07477 247 aa14.32□□□□□ -0.12
PCDHA1-203ENST00000504120 SFTPCP11686 197 aa14.32□□□□□ -0.12
PCDHA1-203ENST00000504120 MMDQ15546 238 aa14.32□□□□□ -0.12
PCDHA1-203ENST00000504120 DCAF12L2Q5VW00 463 aa14.32□□□□□ -0.12
PCDHA1-203ENST00000504120 TMEM222Q9H0R3 208 aa14.32□□□□□ -0.12
PCDHA1-203ENST00000504120 DOCK3Q8IZD9 2030 aa14.32□□□□□ -0.12
PCDHA1-203ENST00000504120 PRR33A8MZF0 331 aa14.32□□□□□ -0.12
PCDHA1-203ENST00000504120 CSN3P07498 182 aa14.32□□□□□ -0.12
PCDHA1-203ENST00000504120 C19orf57Q0VDD7 668 aa14.32□□□□□ -0.12
PCDHA1-203ENST00000504120 IGSF11Q5DX21 431 aa14.32□□□□□ -0.12
PCDHA1-203ENST00000504120 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.32□□□□□ -0.12
PCDHA1-203ENST00000504120 SCARF2Q96GP6 870 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms