RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	FAM90A9P	A6NNJ1	464 aa		8.43	□□□□□ -1.06
FXR1-222	ENST00000498658	HSD17B6	O14756	317 aa		8.43	□□□□□ -1.06
FXR1-222	ENST00000498658	ST8SIA5	O15466	376 aa		8.43	□□□□□ -1.06
FXR1-222	ENST00000498658	IGHV3-7	P01780	117 aa		8.43	□□□□□ -1.06
FXR1-222	ENST00000498658	RCC1	P18754	421 aa	Predicted RBP	8.43	□□□□□ -1.06
FXR1-222	ENST00000498658	ZNF816	Q0VGE8	651 aa	Predicted RBP	8.43	□□□□□ -1.06
FXR1-222	ENST00000498658	HERPUD1	Q15011	391 aa		8.43	□□□□□ -1.06
FXR1-222	ENST00000498658	LY6G6F	Q5SQ64	297 aa		8.43	□□□□□ -1.06
FXR1-222	ENST00000498658	C22orf42	Q6IC83	251 aa		8.43	□□□□□ -1.06
FXR1-222	ENST00000498658	C6orf201	Q7Z4U5	140 aa		8.43	□□□□□ -1.06
FXR1-222	ENST00000498658	TPRA1	Q86W33	373 aa		8.43	□□□□□ -1.06
FXR1-222	ENST00000498658	LINC00528	Q8N1L1	170 aa		8.43	□□□□□ -1.06
FXR1-222	ENST00000498658	MRPL30	Q8TCC3	161 aa	Known RBP	8.43	□□□□□ -1.06
FXR1-222	ENST00000498658	PTX4	Q96A99	478 aa		8.43	□□□□□ -1.06
FXR1-222	ENST00000498658	SULT4A1	Q9BR01	284 aa		8.43	□□□□□ -1.06
FXR1-222	ENST00000498658	SLC25A33	Q9BSK2	321 aa		8.43	□□□□□ -1.06
FXR1-222	ENST00000498658	CHMP1A	Q9HD42	196 aa	Predicted RBP	8.43	□□□□□ -1.06
FXR1-222	ENST00000498658	VCX3A	Q9NNX9	186 aa		8.43	□□□□□ -1.06
FXR1-222	ENST00000498658	OR2S2	Q9NQN1	319 aa		8.43	□□□□□ -1.06
FXR1-222	ENST00000498658	TRBV6-6	A0A0A6YYG2	114 aa		8.42	□□□□□ -1.06
FXR1-222	ENST00000498658	LDLRAD4	O15165	306 aa		8.42	□□□□□ -1.06
FXR1-222	ENST00000498658	YPEL1	O60688	119 aa		8.42	□□□□□ -1.06
FXR1-222	ENST00000498658	NAPSA	O96009	420 aa		8.42	□□□□□ -1.06
FXR1-222	ENST00000498658	JUNB	P17275	347 aa	Predicted RBP	8.42	□□□□□ -1.06
FXR1-222	ENST00000498658	RAB6A	P20340	208 aa		8.42	□□□□□ -1.06
FXR1-222	ENST00000498658	GADD45A	P24522	165 aa		8.42	□□□□□ -1.06
FXR1-222	ENST00000498658	ZNF137P	P52743	207 aa		8.42	□□□□□ -1.06
FXR1-222	ENST00000498658	MRPS15	P82914	257 aa	Known RBP	8.42	□□□□□ -1.06
FXR1-222	ENST00000498658	ARL6IP1	Q15041	203 aa		8.42	□□□□□ -1.06
FXR1-222	ENST00000498658	C2orf68	Q2NKX9	166 aa		8.42	□□□□□ -1.06
FXR1-222	ENST00000498658	UTF1	Q5T230	341 aa		8.42	□□□□□ -1.06
FXR1-222	ENST00000498658	HES5	Q5TA89	166 aa		8.42	□□□□□ -1.06
FXR1-222	ENST00000498658	SLC25A48	Q6ZT89	311 aa	Known RBP	8.42	□□□□□ -1.06
FXR1-222	ENST00000498658	DRAM1	Q8N682	238 aa		8.42	□□□□□ -1.06
FXR1-222	ENST00000498658	OR1L1	Q8NH94	360 aa		8.42	□□□□□ -1.06
FXR1-222	ENST00000498658	YPEL2	Q96QA6	119 aa		8.42	□□□□□ -1.06
FXR1-222	ENST00000498658	NICN1	Q9BSH3	213 aa		8.42	□□□□□ -1.06
FXR1-222	ENST00000498658	CENPO	Q9BU64	300 aa		8.42	□□□□□ -1.06
FXR1-222	ENST00000498658	GHITM	Q9H3K2	345 aa		8.42	□□□□□ -1.06
FXR1-222	ENST00000498658	ZNF702P	Q9H963	129 aa		8.42	□□□□□ -1.06
FXR1-222	ENST00000498658	C12orf4	Q9NQ89	552 aa		8.42	□□□□□ -1.06
FXR1-222	ENST00000498658	TXNL4B	Q9NX01	149 aa	Known RBP	8.42	□□□□□ -1.06
FXR1-222	ENST00000498658		A0A0A6YYD4	124 aa		8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	IGHV3-43	A0A0B4J1X8	118 aa		8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	IGHV1-3	A0A0C4DH29	117 aa		8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	TMEM272	A0A1B0GTI8	110 aa		8.41	□□□□□ -1.06
FXR1-222	ENST00000498658		A0A1W2PPI3	338 aa		8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	NOTO	A8MTQ0	251 aa		8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	SOCS1	O15524	211 aa		8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	TMEM127	O75204	238 aa		8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	TNFAIP8	O95379	198 aa		8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	SNRNP70	P08621	437 aa	Known RBP	8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	IGHV3-43D	P0DP04	118 aa		8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	VSIG10L2	P0DP72	767 aa		8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	TMEM11	P17152	192 aa		8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	CD24	P25063	80 aa		8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	CD1B	P29016	333 aa		8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	VDAC2	P45880	294 aa	Predicted RBP	8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	VEGFC	P49767	419 aa		8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	CLDN12	P56749	244 aa		8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	OR10A3	P58181	314 aa		8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	BLCAP	P62952	87 aa		8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	SRSF4	Q08170	494 aa	Known RBP	8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	HES1	Q14469	280 aa		8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	HABP2	Q14520	560 aa	Predicted RBP	8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	HMGN3	Q15651	99 aa		8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	TIMM50	Q3ZCQ8	353 aa		8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	MORN2	Q502X0	79 aa		8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	ZNF880	Q6PDB4	577 aa		8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	TREML4	Q6UXN2	200 aa		8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	MOB3B	Q86TA1	216 aa		8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	TGIF2LX	Q8IUE1	241 aa		8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	KLHDC1	Q8N7A1	406 aa		8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	OR2AK2	Q8NG84	335 aa		8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	OR56B4	Q8NH76	319 aa		8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	UBALD1	Q8TB05	177 aa		8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	SETD6	Q8TBK2	473 aa		8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	CFHR4	Q92496	578 aa		8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	RAB3C	Q96E17	227 aa		8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	KCTD7	Q96MP8	289 aa		8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	ABHD14A	Q9BUJ0	271 aa		8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	KCNK15	Q9H427	330 aa		8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	SIGLEC9	Q9Y336	463 aa		8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	MOB4	Q9Y3A3	225 aa		8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	TRRAP	Q9Y4A5	3859 aa		8.41	□□□□□ -1.06
FXR1-222	ENST00000498658	NBEAL1	Q6ZS30	2694 aa		8.4	□□□□□ -1.06
FXR1-222	ENST00000498658		A0A087WXM4	84 aa		8.4	□□□□□ -1.06
FXR1-222	ENST00000498658		A0A1W2PPE3	182 aa		8.4	□□□□□ -1.06
FXR1-222	ENST00000498658	FOXI3	A8MTJ6	420 aa	Predicted RBP	8.4	□□□□□ -1.06
FXR1-222	ENST00000498658	FGF16	O43320	207 aa		8.4	□□□□□ -1.06
FXR1-222	ENST00000498658	LANCL1	O43813	399 aa		8.4	□□□□□ -1.06
FXR1-222	ENST00000498658	SCGN	O76038	276 aa		8.4	□□□□□ -1.06
FXR1-222	ENST00000498658	IGKV1D-33	P01593	117 aa		8.4	□□□□□ -1.06
FXR1-222	ENST00000498658	IGKV1-33	P01594	117 aa		8.4	□□□□□ -1.06
FXR1-222	ENST00000498658	ZBTB25	P24278	435 aa		8.4	□□□□□ -1.06
FXR1-222	ENST00000498658	KRTAP10-3	P60369	221 aa		8.4	□□□□□ -1.06
FXR1-222	ENST00000498658	EBI3	Q14213	229 aa		8.4	□□□□□ -1.06
FXR1-222	ENST00000498658	NEDD8	Q15843	81 aa		8.4	□□□□□ -1.06
FXR1-222	ENST00000498658	CT45A1	Q5HYN5	189 aa		8.4	□□□□□ -1.06

Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms