RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 ZNF596Q8TC21 504 aa11.74□□□□□ -0.53
USP11-212ENST00000497179 MAFIPQ8WZ33 124 aa11.74□□□□□ -0.53
USP11-212ENST00000497179 LEAP2Q969E1 77 aa11.74□□□□□ -0.53
USP11-212ENST00000497179 AJUBAQ96IF1 538 aa11.74□□□□□ -0.53
USP11-212ENST00000497179 ZNF48Q96MX3 618 aaPredicted RBP11.74□□□□□ -0.53
USP11-212ENST00000497179 MMP27Q9H306 513 aa11.74□□□□□ -0.53
USP11-212ENST00000497179 PRDM13Q9H4Q3 707 aa11.74□□□□□ -0.53
USP11-212ENST00000497179 OR2S2Q9NQN1 319 aa11.74□□□□□ -0.53
USP11-212ENST00000497179 GNG12Q9UBI6 72 aa11.74□□□□□ -0.53
USP11-212ENST00000497179 ZNF230Q9UIE0 474 aaPredicted RBP11.74□□□□□ -0.53
USP11-212ENST00000497179 PSG11Q9UQ72 335 aa11.74□□□□□ -0.53
USP11-212ENST00000497179 IGKV1-6A0A0C4DH72 117 aa11.73□□□□□ -0.53
USP11-212ENST00000497179 J3QR06 171 aa11.73□□□□□ -0.53
USP11-212ENST00000497179 TOR1AO14656 332 aa11.73□□□□□ -0.53
USP11-212ENST00000497179 FABP7O15540 132 aa11.73□□□□□ -0.53
USP11-212ENST00000497179 DIRAS3O95661 229 aa11.73□□□□□ -0.53
USP11-212ENST00000497179 SCTP09683 121 aa11.73□□□□□ -0.53
USP11-212ENST00000497179 CBX5P45973 191 aa11.73□□□□□ -0.53
USP11-212ENST00000497179 PRRX1P54821 245 aa11.73□□□□□ -0.53
USP11-212ENST00000497179 LGALS4P56470 323 aa11.73□□□□□ -0.53
USP11-212ENST00000497179 GNMTQ14749 295 aa11.73□□□□□ -0.53
USP11-212ENST00000497179 HLA-DRB5Q30154 266 aa11.73□□□□□ -0.53
USP11-212ENST00000497179 DEFB112Q30KQ8 113 aa11.73□□□□□ -0.53
USP11-212ENST00000497179 LY6G6FQ5SQ64 297 aa11.73□□□□□ -0.53
USP11-212ENST00000497179 LDLRAD2Q5SZI1 272 aa11.73□□□□□ -0.53
USP11-212ENST00000497179 MINOS1Q5TGZ0 78 aa11.73□□□□□ -0.53
USP11-212ENST00000497179 FAM53AQ6NSI3 398 aaPredicted RBP11.73□□□□□ -0.53
USP11-212ENST00000497179 CNIH2Q6PI25 160 aa11.73□□□□□ -0.53
USP11-212ENST00000497179 LINC00311Q8N616 119 aa11.73□□□□□ -0.53
USP11-212ENST00000497179 OR52L2PQ8NGH6 319 aa11.73□□□□□ -0.53
USP11-212ENST00000497179 OR10V1Q8NGI7 309 aa11.73□□□□□ -0.53
USP11-212ENST00000497179 IL1F10Q8WWZ1 152 aa11.73□□□□□ -0.53
USP11-212ENST00000497179 OCSTAMPQ9BR26 566 aa11.73□□□□□ -0.53
USP11-212ENST00000497179 CABLES2Q9BTV7 478 aa11.73□□□□□ -0.53
USP11-212ENST00000497179 MMP28Q9H239 520 aa11.73□□□□□ -0.53
USP11-212ENST00000497179 BATF3Q9NR55 127 aa11.73□□□□□ -0.53
USP11-212ENST00000497179 MINOS1-NBL1R4GNA1 71 aa11.73□□□□□ -0.53
USP11-212ENST00000497179 CUBNO60494 3623 aa11.73□□□□□ -0.53
USP11-212ENST00000497179 IGKV1D-8A0A087WSZ0 117 aa11.72□□□□□ -0.53
USP11-212ENST00000497179 MDFIC2A0A1B0GVS7 189 aa11.72□□□□□ -0.53
USP11-212ENST00000497179 YPEL1O60688 119 aa11.72□□□□□ -0.53
USP11-212ENST00000497179 IGHV3-7P01780 117 aa11.72□□□□□ -0.53
USP11-212ENST00000497179 FBP1P09467 338 aa11.72□□□□□ -0.53
USP11-212ENST00000497179 HTR1DP28221 377 aa11.72□□□□□ -0.53
USP11-212ENST00000497179 PRSS3P35030 304 aa11.72□□□□□ -0.53
USP11-212ENST00000497179 PPP1CCP36873 323 aaKnown RBP11.72□□□□□ -0.53
USP11-212ENST00000497179 GNG10P50151 68 aa11.72□□□□□ -0.53
USP11-212ENST00000497179 HERPUD1Q15011 391 aa11.72□□□□□ -0.53
USP11-212ENST00000497179 LHFPL4Q7Z7J7 247 aa11.72□□□□□ -0.53
USP11-212ENST00000497179 HOGA1Q86XE5 327 aa11.72□□□□□ -0.53
USP11-212ENST00000497179 SIGLECL1Q8N7X8 197 aa11.72□□□□□ -0.53
USP11-212ENST00000497179 ZNF418Q8TF45 676 aaPredicted RBP11.72□□□□□ -0.53
USP11-212ENST00000497179 GCDHQ92947 438 aaPredicted RBP11.72□□□□□ -0.53
USP11-212ENST00000497179 YPEL2Q96QA6 119 aa11.72□□□□□ -0.53
USP11-212ENST00000497179 SCPEP1Q9HB40 452 aa11.72□□□□□ -0.53
USP11-212ENST00000497179 ZNRD1Q9P1U0 126 aa11.72□□□□□ -0.53
USP11-212ENST00000497179 ANAPC10Q9UM13 185 aa11.72□□□□□ -0.53
USP11-212ENST00000497179 MRPS7Q9Y2R9 242 aaKnown RBP11.72□□□□□ -0.53
USP11-212ENST00000497179 FAM96BQ9Y3D0 163 aa11.72□□□□□ -0.53
USP11-212ENST00000497179 AMMECR1Q9Y4X0 333 aaPredicted RBP11.72□□□□□ -0.53
USP11-212ENST00000497179 BUB1B-PAK6H3BSN5 160 aa11.71□□□□□ -0.53
USP11-212ENST00000497179 RGS11O94810 467 aa11.71□□□□□ -0.53
USP11-212ENST00000497179 LPLP06858 475 aa11.71□□□□□ -0.53
USP11-212ENST00000497179 GSTT2P0CG29 244 aa11.71□□□□□ -0.53
USP11-212ENST00000497179 GSTT2BP0CG30 244 aa11.71□□□□□ -0.53
USP11-212ENST00000497179 MADCAM1Q13477 382 aa11.71□□□□□ -0.53
USP11-212ENST00000497179 MORN2Q502X0 79 aa11.71□□□□□ -0.53
USP11-212ENST00000497179 SLC25A48Q6ZT89 311 aaKnown RBP11.71□□□□□ -0.53
USP11-212ENST00000497179 LDLRAD3Q86YD5 345 aa11.71□□□□□ -0.53
USP11-212ENST00000497179 SNX29P2Q8IUI4 249 aa11.71□□□□□ -0.53
USP11-212ENST00000497179 GPX8Q8TED1 209 aa11.71□□□□□ -0.53
USP11-212ENST00000497179 C15orf40Q8WUR7 153 aa11.71□□□□□ -0.53
USP11-212ENST00000497179 C17orf50Q8WW18 174 aa11.71□□□□□ -0.53
USP11-212ENST00000497179 CREB3L1Q96BA8 519 aa11.71□□□□□ -0.53
USP11-212ENST00000497179 MALSU1Q96EH3 234 aa11.71□□□□□ -0.53
USP11-212ENST00000497179 DIRAS2Q96HU8 199 aa11.71□□□□□ -0.53
USP11-212ENST00000497179 ST6GALNAC5Q9BVH7 336 aa11.71□□□□□ -0.53
USP11-212ENST00000497179 OCEL1Q9H607 264 aa11.71□□□□□ -0.53
USP11-212ENST00000497179 OR1A1Q9P1Q5 309 aa11.71□□□□□ -0.53
USP11-212ENST00000497179 DPM3Q9P2X0 92 aa11.71□□□□□ -0.53
USP11-212ENST00000497179 RABL2AQ9UBK7 228 aaPredicted RBP11.71□□□□□ -0.53
USP11-212ENST00000497179 ANXA10Q9UJ72 324 aa11.71□□□□□ -0.53
USP11-212ENST00000497179 RABL2BQ9UNT1 228 aa11.71□□□□□ -0.53
USP11-212ENST00000497179 TRBV6-7A0A0A0MS04 114 aa11.7□□□□□ -0.54
USP11-212ENST00000497179 A0A0A6YYJ9 748 aa11.7□□□□□ -0.54
USP11-212ENST00000497179 A0A1W2PPE3 182 aa11.7□□□□□ -0.54
USP11-212ENST00000497179 LEUTXA8MZ59 168 aa11.7□□□□□ -0.54
USP11-212ENST00000497179 LY6LH3BQJ8 138 aa11.7□□□□□ -0.54
USP11-212ENST00000497179 SULT1C2O00338 296 aa11.7□□□□□ -0.54
USP11-212ENST00000497179 SLC31A2O15432 143 aa11.7□□□□□ -0.54
USP11-212ENST00000497179 IFNA2P01563 188 aa11.7□□□□□ -0.54
USP11-212ENST00000497179 ZBTB25P24278 435 aa11.7□□□□□ -0.54
USP11-212ENST00000497179 TNFSF8P32971 234 aa11.7□□□□□ -0.54
USP11-212ENST00000497179 CEACAM3P40198 252 aa11.7□□□□□ -0.54
USP11-212ENST00000497179 HILS1P60008 231 aa11.7□□□□□ -0.54
USP11-212ENST00000497179 IGSF11Q5DX21 431 aa11.7□□□□□ -0.54
USP11-212ENST00000497179 CT45A1Q5HYN5 189 aa11.7□□□□□ -0.54
USP11-212ENST00000497179 RBMS3Q6XE24 437 aaKnown RBP11.7□□□□□ -0.54
USP11-212ENST00000497179 DYNAPQ8N1N2 210 aa11.7□□□□□ -0.54
USP11-212ENST00000497179 GVQW1Q8N7I0 195 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms