RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 MOB1BQ7L9L4 216 aa12.54□□□□□ -0.4
CHTOP-206ENST00000495554 WDR86Q86TI4 376 aa12.54□□□□□ -0.4
CHTOP-206ENST00000495554 WNT2BQ93097 391 aa12.54□□□□□ -0.4
CHTOP-206ENST00000495554 TRIB1Q96RU8 372 aa12.54□□□□□ -0.4
CHTOP-206ENST00000495554 GPHA2Q96T91 129 aa12.54□□□□□ -0.4
CHTOP-206ENST00000495554 PFDN5Q99471 154 aa12.54□□□□□ -0.4
CHTOP-206ENST00000495554 NPIPB11E5RHQ5 1161 aa12.54□□□□□ -0.4
CHTOP-206ENST00000495554 AGPAT2O15120 278 aa12.54□□□□□ -0.4
CHTOP-206ENST00000495554 CEACAM1P13688 526 aa12.54□□□□□ -0.4
CHTOP-206ENST00000495554 F2RP25116 425 aa12.54□□□□□ -0.4
CHTOP-206ENST00000495554 DVL1P1P54792 670 aaPredicted RBP12.54□□□□□ -0.4
CHTOP-206ENST00000495554 GABRA6Q16445 453 aa12.54□□□□□ -0.4
CHTOP-206ENST00000495554 OR2B11Q5JQS5 317 aa12.54□□□□□ -0.4
CHTOP-206ENST00000495554 RNASE11Q8TAA1 199 aaKnown RBP12.54□□□□□ -0.4
CHTOP-206ENST00000495554 AQP7O14520 342 aa12.53□□□□□ -0.4
CHTOP-206ENST00000495554 OR8U9P0C7N5 309 aa12.53□□□□□ -0.4
CHTOP-206ENST00000495554 UCP2P55851 309 aa12.53□□□□□ -0.4
CHTOP-206ENST00000495554 COMMD1Q8N668 190 aa12.53□□□□□ -0.4
CHTOP-206ENST00000495554 SLC24A4Q8NFF2 622 aa12.53□□□□□ -0.4
CHTOP-206ENST00000495554 OR8U1Q8NH10 309 aa12.53□□□□□ -0.4
CHTOP-206ENST00000495554 SLC25A40Q8TBP6 338 aa12.53□□□□□ -0.4
CHTOP-206ENST00000495554 SFT2D1Q8WV19 159 aa12.53□□□□□ -0.4
CHTOP-206ENST00000495554 ADAT1Q9BUB4 502 aaKnown RBP12.53□□□□□ -0.4
CHTOP-206ENST00000495554 PLEKHF2Q9H8W4 249 aa12.53□□□□□ -0.4
CHTOP-206ENST00000495554 LYRM2Q9NU23 88 aaPredicted RBP12.53□□□□□ -0.4
CHTOP-206ENST00000495554 ERRFI1Q9UJM3 462 aaPredicted RBP12.53□□□□□ -0.4
CHTOP-206ENST00000495554 IQCF6A8MYZ5 107 aa12.53□□□□□ -0.4
CHTOP-206ENST00000495554 C3orf80F5H4A9 247 aa12.53□□□□□ -0.4
CHTOP-206ENST00000495554 NDUFS8O00217 210 aa12.53□□□□□ -0.4
CHTOP-206ENST00000495554 TXNL1O43396 289 aa12.53□□□□□ -0.4
CHTOP-206ENST00000495554 TNFSF12O43508 249 aa12.53□□□□□ -0.4
CHTOP-206ENST00000495554 TSPAN15O95858 294 aa12.53□□□□□ -0.4
CHTOP-206ENST00000495554 OR2H2O95918 312 aa12.53□□□□□ -0.4
CHTOP-206ENST00000495554 S100A8P05109 93 aa12.53□□□□□ -0.4
CHTOP-206ENST00000495554 SFTA3P0C7M3 94 aa12.53□□□□□ -0.4
CHTOP-206ENST00000495554 SELEP16581 610 aa12.53□□□□□ -0.4
CHTOP-206ENST00000495554 CD80P33681 288 aa12.53□□□□□ -0.4
CHTOP-206ENST00000495554 ID4P47928 161 aa12.53□□□□□ -0.4
CHTOP-206ENST00000495554 ERVS71-1P61550 626 aa12.53□□□□□ -0.4
CHTOP-206ENST00000495554 ID3Q02535 119 aa12.53□□□□□ -0.4
CHTOP-206ENST00000495554 ZNF266Q14584 549 aa12.53□□□□□ -0.4
CHTOP-206ENST00000495554 IGFBP7Q16270 282 aa12.53□□□□□ -0.4
CHTOP-206ENST00000495554 HFEQ30201 348 aa12.53□□□□□ -0.4
CHTOP-206ENST00000495554 CXorf66Q5JRM2 361 aaPredicted RBP12.53□□□□□ -0.4
CHTOP-206ENST00000495554 IL1F10Q8WWZ1 152 aa12.53□□□□□ -0.4
CHTOP-206ENST00000495554 TAAR6Q96RI8 345 aa12.53□□□□□ -0.4
CHTOP-206ENST00000495554 SLC25A31Q9H0C2 315 aa12.53□□□□□ -0.4
CHTOP-206ENST00000495554 FAM24AA6NFZ4 105 aa12.52□□□□□ -0.4
CHTOP-206ENST00000495554 SLC33A1O00400 549 aaPredicted RBP12.52□□□□□ -0.4
CHTOP-206ENST00000495554 SSSCA1O60232 199 aa12.52□□□□□ -0.4
CHTOP-206ENST00000495554 PGA5P0DJD9 388 aa12.52□□□□□ -0.4
CHTOP-206ENST00000495554 MMP9P14780 707 aa12.52□□□□□ -0.4
CHTOP-206ENST00000495554 NBL1P41271 181 aa12.52□□□□□ -0.4
CHTOP-206ENST00000495554 KIR2DL2P43627 348 aaPredicted RBP12.52□□□□□ -0.4
CHTOP-206ENST00000495554 VAMP2P63027 116 aa12.52□□□□□ -0.4
CHTOP-206ENST00000495554 ZNF154Q13106 437 aa12.52□□□□□ -0.4
CHTOP-206ENST00000495554 RTP5Q14D33 572 aa12.52□□□□□ -0.4
CHTOP-206ENST00000495554 ZNF146Q15072 292 aa12.52□□□□□ -0.4
CHTOP-206ENST00000495554 C9orf152Q5JTZ5 239 aa12.52□□□□□ -0.4
CHTOP-206ENST00000495554 ZNF497Q6ZNH5 498 aa12.52□□□□□ -0.4
CHTOP-206ENST00000495554 OR1J1Q8NGS3 322 aa12.52□□□□□ -0.4
CHTOP-206ENST00000495554 PARP12Q9H0J9 701 aaKnown RBP12.52□□□□□ -0.4
CHTOP-206ENST00000495554 STRAPQ9Y3F4 350 aaKnown RBP12.52□□□□□ -0.4
CHTOP-206ENST00000495554 BOD1L1Q8NFC6 3051 aa12.52□□□□□ -0.4
CHTOP-206ENST00000495554 AKAP13Q12802 2813 aa12.52□□□□□ -0.41
CHTOP-206ENST00000495554 CDIPTO14735 213 aa12.52□□□□□ -0.41
CHTOP-206ENST00000495554 CNEP1R1Q8N9A8 125 aa12.52□□□□□ -0.41
CHTOP-206ENST00000495554 C9orf106Q8NAJ2 232 aa12.52□□□□□ -0.41
CHTOP-206ENST00000495554 HSD17B11Q8NBQ5 300 aa12.52□□□□□ -0.41
CHTOP-206ENST00000495554 CACFD1Q9UGQ2 172 aa12.52□□□□□ -0.41
CHTOP-206ENST00000495554 MLXQ9UH92 298 aa12.52□□□□□ -0.41
CHTOP-206ENST00000495554 DSPP15924 2871 aaKnown RBP12.52□□□□□ -0.41
CHTOP-206ENST00000495554 PRR14LQ5THK1 2151 aa12.51□□□□□ -0.41
CHTOP-206ENST00000495554 IGSF23A1L1A6 192 aa12.51□□□□□ -0.41
CHTOP-206ENST00000495554 ZNF891A8MT65 544 aaPredicted RBP12.51□□□□□ -0.41
CHTOP-206ENST00000495554 SIRPB1O00241 398 aa12.51□□□□□ -0.41
CHTOP-206ENST00000495554 SH2D1BO14796 132 aa12.51□□□□□ -0.41
CHTOP-206ENST00000495554 NXPH2O95156 264 aa12.51□□□□□ -0.41
CHTOP-206ENST00000495554 LY86O95711 162 aa12.51□□□□□ -0.41
CHTOP-206ENST00000495554 WNT2P09544 360 aa12.51□□□□□ -0.41
CHTOP-206ENST00000495554 CAMLGP49069 296 aa12.51□□□□□ -0.41
CHTOP-206ENST00000495554 ZNF616Q08AN1 781 aa12.51□□□□□ -0.41
CHTOP-206ENST00000495554 PSG7Q13046 419 aa12.51□□□□□ -0.41
CHTOP-206ENST00000495554 MIDNQ504T8 468 aa12.51□□□□□ -0.41
CHTOP-206ENST00000495554 DHRS7BQ6IAN0 325 aaPredicted RBP12.51□□□□□ -0.41
CHTOP-206ENST00000495554 TMEM88Q6PEY1 159 aa12.51□□□□□ -0.41
CHTOP-206ENST00000495554 TMEM252Q8N6L7 170 aa12.51□□□□□ -0.41
CHTOP-206ENST00000495554 OR10V1Q8NGI7 309 aa12.51□□□□□ -0.41
CHTOP-206ENST00000495554 MAGT1Q9H0U3 335 aa12.51□□□□□ -0.41
CHTOP-206ENST00000495554 SH3BGRL3Q9H299 93 aa12.51□□□□□ -0.41
CHTOP-206ENST00000495554 TRAPPC2LQ9UL33 140 aa12.51□□□□□ -0.41
CHTOP-206ENST00000495554 MUC6Q6W4X9 2439 aa12.51□□□□□ -0.41
CHTOP-206ENST00000495554 GVINP1Q7Z2Y8 2422 aa12.51□□□□□ -0.41
CHTOP-206ENST00000495554 CEP250Q9BV73 2442 aa12.51□□□□□ -0.41
CHTOP-206ENST00000495554 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.51□□□□□ -0.41
CHTOP-206ENST00000495554 H7C2Y5 167 aa12.51□□□□□ -0.41
CHTOP-206ENST00000495554 PITX3O75364 302 aa12.51□□□□□ -0.41
CHTOP-206ENST00000495554 F12P00748 615 aaPredicted RBP12.51□□□□□ -0.41
CHTOP-206ENST00000495554 PRH1P02810 166 aa12.51□□□□□ -0.41
CHTOP-206ENST00000495554 SERPINE2P07093 398 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 165.3 ms