RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 PIRO00625 290 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 ANGPTL7O43827 346 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 REM1O75628 298 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 GATBO75879 557 aaKnown RBP2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 SNAPINO95295 136 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 IGHV3-23P01764 117 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 MMP7P09237 267 aaPredicted RBP2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 ICAM2P13598 275 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 KCNE1P15382 129 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 CD1EP15812 388 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 SPNP16150 400 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 ALOX5APP20292 161 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 SSTR5P35346 364 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 MDH2P40926 338 aaKnown RBP2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 OMPP47874 163 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 RPL34P49207 117 aaKnown RBP2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 RAP1GDS1P52306 607 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 SLC25A1P53007 311 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 TAS2R43P59537 309 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 CD47Q08722 323 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 KRR1Q13601 381 aaKnown RBP2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 TOMM34Q15785 309 aaPredicted RBP2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 GSG1Q2KHT4 349 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 TCEAL5Q5H9L2 206 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 SLC25A30Q5SVS4 291 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 TMEM42Q69YG0 159 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 OR10K2Q6IF99 312 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 DGAT2L6Q6ZPD8 337 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 RASSF6Q6ZTQ3 369 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 STRADAQ7RTN6 431 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 NT5DC3Q86UY8 548 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 CLDN22Q8N7P3 220 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 ZNF676Q8N7Q3 588 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 COX18Q8N8Q8 333 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 C7orf33Q8WU49 177 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 FAM172AQ8WUF8 416 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 ASB17Q8WXJ9 295 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 SLC35B4Q969S0 331 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 MARC2Q969Z3 335 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 KCNS1Q96KK3 526 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 LINC00477Q96M19 166 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 OR5M11Q96RB7 305 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 LINC01587Q99440 93 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 EBF4Q9BQW3 602 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 C19orf24Q9BVV8 132 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 POLR2J2Q9GZM3 115 aaKnown RBP2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 POLR2J3Q9H1A7 115 aaKnown RBP2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 TPK1Q9H3S4 243 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 TRABDQ9H4I3 376 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 HEXA-AS1Q9H8Q6 139 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 MED4Q9NPJ6 270 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 GLTPQ9NZD2 209 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 TMEM9Q9P0T7 183 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 DPM3Q9P2X0 92 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 OR12D3Q9UGF7 316 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 PRELID3BQ9Y3B1 194 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 V9GYQ6 96 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 IGHV3OR16-10A0A075B7F0 116 aa2.27□□□□□ -2.05
DEPDC1-204ENST00000489862 GNG14A0A1W2PPG7 69 aa2.27□□□□□ -2.05
DEPDC1-204ENST00000489862 A0A1W2PRG6 482 aa2.27□□□□□ -2.05
DEPDC1-204ENST00000489862 DISC1C4P0D8 188 aa2.27□□□□□ -2.05
DEPDC1-204ENST00000489862 SLC31A2O15432 143 aa2.27□□□□□ -2.05
DEPDC1-204ENST00000489862 TRAF3IP2O43734 574 aaPredicted RBP2.27□□□□□ -2.05
DEPDC1-204ENST00000489862 UGT2B11O75310 529 aa2.27□□□□□ -2.05
DEPDC1-204ENST00000489862 PDCD6O75340 191 aa2.27□□□□□ -2.05
DEPDC1-204ENST00000489862 SRSF10O75494 262 aaKnown RBP2.27□□□□□ -2.05
DEPDC1-204ENST00000489862 KRT75O95678 551 aa2.27□□□□□ -2.05
DEPDC1-204ENST00000489862 IFNA14P01570 189 aa2.27□□□□□ -2.05
DEPDC1-204ENST00000489862 IGLV2-8P01709 118 aa2.27□□□□□ -2.05
DEPDC1-204ENST00000489862 FABP3P05413 133 aa2.27□□□□□ -2.05
DEPDC1-204ENST00000489862 GIG44P09565 113 aaPredicted RBP2.27□□□□□ -2.05
DEPDC1-204ENST00000489862 MYL9P24844 172 aa2.27□□□□□ -2.05
DEPDC1-204ENST00000489862 CCR7P32248 378 aa2.27□□□□□ -2.05
DEPDC1-204ENST00000489862 CD79BP40259 229 aa2.27□□□□□ -2.05
DEPDC1-204ENST00000489862 TTPAP49638 278 aa2.27□□□□□ -2.05
DEPDC1-204ENST00000489862 P2RX1P51575 399 aa2.27□□□□□ -2.05
DEPDC1-204ENST00000489862 HBG1P69891 147 aa2.27□□□□□ -2.05
DEPDC1-204ENST00000489862 HBG2P69892 147 aa2.27□□□□□ -2.05
DEPDC1-204ENST00000489862 PDCD11Q14690 1871 aaKnown RBP2.27□□□□□ -2.05
DEPDC1-204ENST00000489862 PRR30Q53SZ7 412 aaPredicted RBP2.27□□□□□ -2.05
DEPDC1-204ENST00000489862 CLEC19AQ6UXS0 136 aa2.27□□□□□ -2.05
DEPDC1-204ENST00000489862 ACP7Q6ZNF0 438 aa2.27□□□□□ -2.05
DEPDC1-204ENST00000489862 GLT6D1Q7Z4J2 308 aa2.27□□□□□ -2.05
DEPDC1-204ENST00000489862 FAM19A3Q7Z5A8 133 aa2.27□□□□□ -2.05
DEPDC1-204ENST00000489862 HSD17B13Q7Z5P4 300 aaPredicted RBP2.27□□□□□ -2.05
DEPDC1-204ENST00000489862 CEND1Q8N111 149 aa2.27□□□□□ -2.05
DEPDC1-204ENST00000489862 MUC15Q8N387 334 aa2.27□□□□□ -2.05
DEPDC1-204ENST00000489862 ZNF414Q96IQ9 312 aa2.27□□□□□ -2.05
DEPDC1-204ENST00000489862 QKIQ96PU8 341 aaKnown RBP eCLIP2.27□□□□□ -2.051e-6■□□□□ 9.1
DEPDC1-204ENST00000489862 PKMYT1Q99640 499 aa2.27□□□□□ -2.05
DEPDC1-204ENST00000489862 TIPINQ9BVW5 301 aa2.27□□□□□ -2.05
DEPDC1-204ENST00000489862 SMPXQ9UHP9 88 aa2.27□□□□□ -2.05
DEPDC1-204ENST00000489862 ZNF391Q9UJN7 358 aa2.27□□□□□ -2.05
DEPDC1-204ENST00000489862 KLK13Q9UKR3 277 aa2.27□□□□□ -2.05
DEPDC1-204ENST00000489862 FBXO5Q9UKT4 447 aa2.27□□□□□ -2.05
DEPDC1-204ENST00000489862 TP53TG5Q9Y2B4 290 aa2.27□□□□□ -2.05
DEPDC1-204ENST00000489862 PKIGQ9Y2B9 76 aa2.27□□□□□ -2.05
DEPDC1-204ENST00000489862 FLVCR1Q9Y5Y0 555 aa2.27□□□□□ -2.05
DEPDC1-204ENST00000489862 CLUHO75153 1309 aa2.27□□□□□ -2.05
DEPDC1-204ENST00000489862 LAMA1P25391 3075 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms