RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 ASF1BQ9NVP2 202 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 MED9Q9NWA0 146 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 RNF7Q9UBF6 113 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 Q9UFV3 132 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 DUSP13Q9UII6 198 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 KIF25Q9UIL4 384 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 TNFSF18Q9UNG2 199 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 TMEM56-RWDD3S4R434 201 aa5.37□□□□□ -1.55
SF3A3-208ENST00000489537 CSMD1Q96PZ7 3565 aa5.36□□□□□ -1.55
SF3A3-208ENST00000489537 HIVEP3Q5T1R4 2406 aa5.36□□□□□ -1.55
SF3A3-208ENST00000489537 BORCS7-ASMTA0A0B4J1R7 106 aa5.36□□□□□ -1.55
SF3A3-208ENST00000489537 TRGV8A0A0C4DH27 118 aa5.36□□□□□ -1.55
SF3A3-208ENST00000489537 NKX6-3A6NJ46 265 aa5.36□□□□□ -1.55
SF3A3-208ENST00000489537 E5RGE8 158 aa5.36□□□□□ -1.55
SF3A3-208ENST00000489537 BET1O15155 118 aa5.36□□□□□ -1.55
SF3A3-208ENST00000489537 ST8SIA3O43173 380 aa5.36□□□□□ -1.55
SF3A3-208ENST00000489537 MLNRO43193 412 aa5.36□□□□□ -1.55
SF3A3-208ENST00000489537 GPR137BO60478 399 aa5.36□□□□□ -1.55
SF3A3-208ENST00000489537 RHBDL1O75783 438 aa5.36□□□□□ -1.55
SF3A3-208ENST00000489537 JTBO76095 146 aa5.36□□□□□ -1.55
SF3A3-208ENST00000489537 GOSR1O95249 250 aa5.36□□□□□ -1.55
SF3A3-208ENST00000489537 HEXAP06865 529 aa5.36□□□□□ -1.55
SF3A3-208ENST00000489537 CD3EP07766 207 aa5.36□□□□□ -1.55
SF3A3-208ENST00000489537 TPT1P13693 172 aaKnown RBP5.36□□□□□ -1.55
SF3A3-208ENST00000489537 RPS2P15880 293 aaKnown RBP5.36□□□□□ -1.55
SF3A3-208ENST00000489537 AGAP20933 346 aa5.36□□□□□ -1.55
SF3A3-208ENST00000489537 AADACP22760 399 aa5.36□□□□□ -1.55
SF3A3-208ENST00000489537 UCP1P25874 307 aa5.36□□□□□ -1.55
SF3A3-208ENST00000489537 PRDX2P32119 198 aa5.36□□□□□ -1.55
SF3A3-208ENST00000489537 RAB7AP51149 207 aa5.36□□□□□ -1.55
SF3A3-208ENST00000489537 FXYD4P59646 89 aa5.36□□□□□ -1.55
SF3A3-208ENST00000489537 TNFAIP6P98066 277 aaPredicted RBP5.36□□□□□ -1.55
SF3A3-208ENST00000489537 TMEM187Q14656 261 aa5.36□□□□□ -1.55
SF3A3-208ENST00000489537 IAH1Q2TAA2 248 aaPredicted RBP5.36□□□□□ -1.55
SF3A3-208ENST00000489537 Q3ZCU0 254 aa5.36□□□□□ -1.55
SF3A3-208ENST00000489537 BEX5Q5H9J7 111 aa5.36□□□□□ -1.55
SF3A3-208ENST00000489537 DMRTC1Q5HYR2 192 aa5.36□□□□□ -1.55
SF3A3-208ENST00000489537 CLLU1Q5K131 121 aa5.36□□□□□ -1.55
SF3A3-208ENST00000489537 ZNF66Q6ZN08 573 aa5.36□□□□□ -1.55
SF3A3-208ENST00000489537 LDLRAD3Q86YD5 345 aa5.36□□□□□ -1.55
SF3A3-208ENST00000489537 ZNF808Q8N4W9 903 aaPredicted RBP5.36□□□□□ -1.55
SF3A3-208ENST00000489537 OR11H4Q8NGC9 324 aa5.36□□□□□ -1.55
SF3A3-208ENST00000489537 OR10A7Q8NGE5 316 aa5.36□□□□□ -1.55
SF3A3-208ENST00000489537 OR10V1Q8NGI7 309 aa5.36□□□□□ -1.55
SF3A3-208ENST00000489537 LRRC29Q8WV35 223 aa5.36□□□□□ -1.55
SF3A3-208ENST00000489537 RBPMSQ93062 196 aaKnown RBP5.36□□□□□ -1.55
SF3A3-208ENST00000489537 RNASE6Q93091 150 aaKnown RBP5.36□□□□□ -1.55
SF3A3-208ENST00000489537 TMEM230Q96A57 120 aa5.36□□□□□ -1.55
SF3A3-208ENST00000489537 MRGPRFQ96AM1 343 aa5.36□□□□□ -1.55
SF3A3-208ENST00000489537 WDR89Q96FK6 387 aaPredicted RBP5.36□□□□□ -1.55
SF3A3-208ENST00000489537 AQP10Q96PS8 301 aa5.36□□□□□ -1.55
SF3A3-208ENST00000489537 DMRTA2Q96SC8 542 aa5.36□□□□□ -1.55
SF3A3-208ENST00000489537 AIFM2Q9BRQ8 373 aa5.36□□□□□ -1.55
SF3A3-208ENST00000489537 HDHD3Q9BSH5 251 aaPredicted RBP5.36□□□□□ -1.55
SF3A3-208ENST00000489537 FGF23Q9GZV9 251 aaPredicted RBP5.36□□□□□ -1.55
SF3A3-208ENST00000489537 SLC25A31Q9H0C2 315 aa5.36□□□□□ -1.55
SF3A3-208ENST00000489537 ZC4H2Q9NQZ6 224 aa5.36□□□□□ -1.55
SF3A3-208ENST00000489537 NSG2Q9Y328 171 aa5.36□□□□□ -1.55
SF3A3-208ENST00000489537 ARHGAP21Q5T5U3 1957 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 TRAV38-1A0A0B4J264 116 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 A0A1B0GU03 582 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 LINC00862A6NCI5 91 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 B9A039 149 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 FAM90A26D6RGX4 464 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.35□□□□□ -1.55
SF3A3-208ENST00000489537 K7EPK0 472 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 SIRPB1O00241 398 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 WRBO00258 174 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 PHF1O43189 567 aaPredicted RBP5.35□□□□□ -1.55
SF3A3-208ENST00000489537 MED6O75586 246 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 LHBP01229 141 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 GAPDHP04406 335 aaKnown RBP5.35□□□□□ -1.55
SF3A3-208ENST00000489537 OR5AC1P0C628 307 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 F2RP25116 425 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 APOBEC3AP31941 199 aaPredicted RBP5.35□□□□□ -1.55
SF3A3-208ENST00000489537 KIR2DS2P43631 304 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 GABRA2P47869 451 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 ERVS71-1P61550 626 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 SUPT4H1P63272 117 aaKnown RBP5.35□□□□□ -1.55
SF3A3-208ENST00000489537 FAM27E3Q08E93 113 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 BAMBIQ13145 260 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 TSC22D1Q15714 1073 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 CR1LQ2VPA4 569 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 KRBOX4Q5JUW0 171 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 C17orf107Q6ZR85 190 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 WDR86Q86TI4 376 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 MYPOPQ86VE0 399 aaPredicted RBP5.35□□□□□ -1.55
SF3A3-208ENST00000489537 PDZD9Q8IXQ8 264 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 OR8H3Q8N146 312 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 GCSAMQ8N6F7 178 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.35□□□□□ -1.55
SF3A3-208ENST00000489537 STOML3Q8TAV4 291 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 FAM222BQ8WU58 562 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 SECTM1Q8WVN6 248 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 MAFIPQ8WZ33 124 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 DCUN1D4Q92564 292 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 LSM10Q969L4 123 aaKnown RBP5.35□□□□□ -1.55
SF3A3-208ENST00000489537 RRNAD1Q96FB5 475 aaKnown RBP5.35□□□□□ -1.55
SF3A3-208ENST00000489537 OR2V2Q96R30 315 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 HSD17B10Q99714 261 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms