RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 RAB9BQ9NP90 201 aa10.27□□□□□ -0.77
HDAC1-209ENST00000484305 NOTCH1P46531 2555 aa10.27□□□□□ -0.77
HDAC1-209ENST00000484305 IGHV3-72A0A0B4J1Y9 119 aa10.26□□□□□ -0.77
HDAC1-209ENST00000484305 M0QZK8 103 aa10.26□□□□□ -0.77
HDAC1-209ENST00000484305 PLXNB1O43157 2135 aa10.26□□□□□ -0.77
HDAC1-209ENST00000484305 KCNAB3O43448 404 aa10.26□□□□□ -0.77
HDAC1-209ENST00000484305 WIPF1O43516 503 aa10.26□□□□□ -0.77
HDAC1-209ENST00000484305 DENRO43583 198 aaKnown RBP10.26□□□□□ -0.77
HDAC1-209ENST00000484305 IGKV1D-33P01593 117 aa10.26□□□□□ -0.77
HDAC1-209ENST00000484305 IGKV1-33P01594 117 aa10.26□□□□□ -0.77
HDAC1-209ENST00000484305 ARSBP15848 533 aa10.26□□□□□ -0.77
HDAC1-209ENST00000484305 TMEM11P17152 192 aa10.26□□□□□ -0.77
HDAC1-209ENST00000484305 BLVRBP30043 206 aaPredicted RBP10.26□□□□□ -0.77
HDAC1-209ENST00000484305 CLDN12P56749 244 aa10.26□□□□□ -0.77
HDAC1-209ENST00000484305 NSUN5P1Q3KNT7 163 aa10.26□□□□□ -0.77
HDAC1-209ENST00000484305 TMEM30BQ3MIR4 351 aa10.26□□□□□ -0.77
HDAC1-209ENST00000484305 Q3ZCU0 254 aa10.26□□□□□ -0.77
HDAC1-209ENST00000484305 CT45A1Q5HYN5 189 aa10.26□□□□□ -0.77
HDAC1-209ENST00000484305 C9orf152Q5JTZ5 239 aa10.26□□□□□ -0.77
HDAC1-209ENST00000484305 MOB3BQ86TA1 216 aa10.26□□□□□ -0.77
HDAC1-209ENST00000484305 OR5AU1Q8NGC0 362 aa10.26□□□□□ -0.77
HDAC1-209ENST00000484305 OR52L2PQ8NGH6 319 aa10.26□□□□□ -0.77
HDAC1-209ENST00000484305 CT45A3Q8NHU0 189 aa10.26□□□□□ -0.77
HDAC1-209ENST00000484305 RTN4IP1Q8WWV3 396 aaPredicted RBP10.26□□□□□ -0.77
HDAC1-209ENST00000484305 CITED2Q99967 270 aaPredicted RBP10.26□□□□□ -0.77
HDAC1-209ENST00000484305 LPAR5Q9H1C0 372 aa10.26□□□□□ -0.77
HDAC1-209ENST00000484305 OR2S2Q9NQN1 319 aa10.26□□□□□ -0.77
HDAC1-209ENST00000484305 KCNIP1Q9NZI2 227 aa10.26□□□□□ -0.77
HDAC1-209ENST00000484305 MOB4Q9Y3A3 225 aa10.26□□□□□ -0.77
HDAC1-209ENST00000484305 ADARB2-AS1A8MUL3 147 aa10.25□□□□□ -0.77
HDAC1-209ENST00000484305 SOCS1O15524 211 aa10.25□□□□□ -0.77
HDAC1-209ENST00000484305 GABARAPL2P60520 117 aa10.25□□□□□ -0.77
HDAC1-209ENST00000484305 DEFA6Q01524 100 aa10.25□□□□□ -0.77
HDAC1-209ENST00000484305 EBI3Q14213 229 aa10.25□□□□□ -0.77
HDAC1-209ENST00000484305 GNMTQ14749 295 aa10.25□□□□□ -0.77
HDAC1-209ENST00000484305 RAB11BQ15907 218 aa10.25□□□□□ -0.77
HDAC1-209ENST00000484305 MORN2Q502X0 79 aa10.25□□□□□ -0.77
HDAC1-209ENST00000484305 Q6ZPA2 131 aa10.25□□□□□ -0.77
HDAC1-209ENST00000484305 OR2W3Q7Z3T1 314 aa10.25□□□□□ -0.77
HDAC1-209ENST00000484305 ZNF554Q86TJ5 538 aa10.25□□□□□ -0.77
HDAC1-209ENST00000484305 OR51D1Q8NGF3 324 aa10.25□□□□□ -0.77
HDAC1-209ENST00000484305 RBMXL1Q96E39 390 aaKnown RBP10.25□□□□□ -0.77
HDAC1-209ENST00000484305 PLEKHJ1Q9NW61 149 aa10.25□□□□□ -0.77
HDAC1-209ENST00000484305 NDUFB11Q9NX14 153 aa10.25□□□□□ -0.77
HDAC1-209ENST00000484305 V9GY05 133 aa10.25□□□□□ -0.77
HDAC1-209ENST00000484305 SHISA3A0PJX4 238 aa10.24□□□□□ -0.77
HDAC1-209ENST00000484305 FOXI3A8MTJ6 420 aaPredicted RBP10.24□□□□□ -0.77
HDAC1-209ENST00000484305 ZNF736B4DX44 427 aaPredicted RBP10.24□□□□□ -0.77
HDAC1-209ENST00000484305 NAPSAO96009 420 aa10.24□□□□□ -0.77
HDAC1-209ENST00000484305 IL3RAP26951 378 aa10.24□□□□□ -0.77
HDAC1-209ENST00000484305 PPP1CCP36873 323 aaKnown RBP10.24□□□□□ -0.77
HDAC1-209ENST00000484305 ZNF137PP52743 207 aa10.24□□□□□ -0.77
HDAC1-209ENST00000484305 HMGN3Q15651 99 aa10.24□□□□□ -0.77
HDAC1-209ENST00000484305 C2orf76Q3KRA6 126 aa10.24□□□□□ -0.77
HDAC1-209ENST00000484305 TCTEX1D4Q5JR98 221 aa10.24□□□□□ -0.77
HDAC1-209ENST00000484305 CD200R1LQ6Q8B3 271 aa10.24□□□□□ -0.77
HDAC1-209ENST00000484305 C10orf99Q6UWK7 81 aa10.24□□□□□ -0.77
HDAC1-209ENST00000484305 CENPVQ7Z7K6 275 aaPredicted RBP10.24□□□□□ -0.77
HDAC1-209ENST00000484305 NDUFA11Q86Y39 141 aa10.24□□□□□ -0.77
HDAC1-209ENST00000484305 FAM89BQ8N5H3 189 aa10.24□□□□□ -0.77
HDAC1-209ENST00000484305 C5orf56Q8N8D9 126 aa10.24□□□□□ -0.77
HDAC1-209ENST00000484305 FAM3DQ96BQ1 224 aa10.24□□□□□ -0.77
HDAC1-209ENST00000484305 EAF1Q96JC9 268 aaPredicted RBP10.24□□□□□ -0.77
HDAC1-209ENST00000484305 URM1Q9BTM9 101 aaKnown RBP10.24□□□□□ -0.77
HDAC1-209ENST00000484305 KRTAP3-3Q9BYR6 98 aa10.24□□□□□ -0.77
HDAC1-209ENST00000484305 KRTAP3-2Q9BYR7 98 aa10.24□□□□□ -0.77
HDAC1-209ENST00000484305 Q9H521 79 aa10.24□□□□□ -0.77
HDAC1-209ENST00000484305 TRAV1-2A0A0B4J238 106 aa10.23□□□□□ -0.77
HDAC1-209ENST00000484305 TRDV1A0A1B0GX56 115 aa10.23□□□□□ -0.77
HDAC1-209ENST00000484305 LDLRAD4O15165 306 aa10.23□□□□□ -0.77
HDAC1-209ENST00000484305 MRPS14O60783 128 aaKnown RBP10.23□□□□□ -0.77
HDAC1-209ENST00000484305 VEGFCP49767 419 aa10.23□□□□□ -0.77
HDAC1-209ENST00000484305 TMEM50BP56557 158 aa10.23□□□□□ -0.77
HDAC1-209ENST00000484305 OR10A3P58181 314 aa10.23□□□□□ -0.77
HDAC1-209ENST00000484305 HTD2P86397 168 aa10.23□□□□□ -0.77
HDAC1-209ENST00000484305 CD83Q01151 205 aa10.23□□□□□ -0.77
HDAC1-209ENST00000484305 PLA2G7Q13093 441 aa10.23□□□□□ -0.77
HDAC1-209ENST00000484305 HES5Q5TA89 166 aa10.23□□□□□ -0.77
HDAC1-209ENST00000484305 UBE2UQ5VVX9 321 aa10.23□□□□□ -0.77
HDAC1-209ENST00000484305 STEAP3Q658P3 488 aa10.23□□□□□ -0.77
HDAC1-209ENST00000484305 ZNF880Q6PDB4 577 aa10.23□□□□□ -0.77
HDAC1-209ENST00000484305 TGIF2LXQ8IUE1 241 aa10.23□□□□□ -0.77
HDAC1-209ENST00000484305 IZUMO1Q8IYV9 350 aa10.23□□□□□ -0.77
HDAC1-209ENST00000484305 SPARTQ8N0X7 666 aa10.23□□□□□ -0.77
HDAC1-209ENST00000484305 SVOPQ8N4V2 548 aa10.23□□□□□ -0.77
HDAC1-209ENST00000484305 Q8N6K4 173 aa10.23□□□□□ -0.77
HDAC1-209ENST00000484305 GALMQ96C23 342 aa10.23□□□□□ -0.77
HDAC1-209ENST00000484305 HDHD3Q9BSH5 251 aaPredicted RBP10.23□□□□□ -0.77
HDAC1-209ENST00000484305 AK3Q9UIJ7 227 aa10.23□□□□□ -0.77
HDAC1-209ENST00000484305 JPT1Q9UK76 154 aa10.23□□□□□ -0.77
HDAC1-209ENST00000484305 LRRC42Q9Y546 428 aa10.23□□□□□ -0.77
HDAC1-209ENST00000484305 TMEM272A0A1B0GTI8 110 aa10.22□□□□□ -0.77
HDAC1-209ENST00000484305 A0A1W2PRX2 142 aa10.22□□□□□ -0.77
HDAC1-209ENST00000484305 PDCD5O14737 125 aa10.22□□□□□ -0.77
HDAC1-209ENST00000484305 FGF16O43320 207 aa10.22□□□□□ -0.77
HDAC1-209ENST00000484305 YPEL1O60688 119 aa10.22□□□□□ -0.77
HDAC1-209ENST00000484305 OPN1MWP04001 364 aa10.22□□□□□ -0.77
HDAC1-209ENST00000484305 OPN1MW2P0DN77 364 aa10.22□□□□□ -0.77
HDAC1-209ENST00000484305 OPN1MW3P0DN78 364 aa10.22□□□□□ -0.77
HDAC1-209ENST00000484305 CD1BP29016 333 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms