RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 CLEC5AQ9NY25 188 aa4.53□□□□□ -1.68
HDAC3-206ENST00000471968 SLC25A37Q9NYZ2 338 aa4.53□□□□□ -1.68
HDAC3-206ENST00000471968 RHCGQ9UBD6 479 aa4.53□□□□□ -1.68
HDAC3-206ENST00000471968 KIF25Q9UIL4 384 aa4.53□□□□□ -1.68
HDAC3-206ENST00000471968 GSTK1Q9Y2Q3 226 aa4.53□□□□□ -1.68
HDAC3-206ENST00000471968 IGHV3-43A0A0B4J1X8 118 aa4.52□□□□□ -1.69
HDAC3-206ENST00000471968 TRAV39A0A0B4J263 110 aa4.52□□□□□ -1.69
HDAC3-206ENST00000471968 DBX1A6NMT0 343 aa4.52□□□□□ -1.69
HDAC3-206ENST00000471968 SDCBPO00560 298 aaPredicted RBP4.52□□□□□ -1.69
HDAC3-206ENST00000471968 HSPB6O14558 160 aa4.52□□□□□ -1.69
HDAC3-206ENST00000471968 MRPS14O60783 128 aaKnown RBP4.52□□□□□ -1.69
HDAC3-206ENST00000471968 IGHV3-43DP0DP04 118 aa4.52□□□□□ -1.69
HDAC3-206ENST00000471968 BCL3P20749 454 aa4.52□□□□□ -1.69
HDAC3-206ENST00000471968 ZNF137PP52743 207 aa4.52□□□□□ -1.69
HDAC3-206ENST00000471968 RHOGP84095 191 aa4.52□□□□□ -1.69
HDAC3-206ENST00000471968 ATP5G2Q06055 141 aa4.52□□□□□ -1.69
HDAC3-206ENST00000471968 FXYD3Q14802 87 aa4.52□□□□□ -1.69
HDAC3-206ENST00000471968 SPIN3Q5JUX0 258 aa4.52□□□□□ -1.69
HDAC3-206ENST00000471968 ATAD3CQ5T2N8 411 aa4.52□□□□□ -1.69
HDAC3-206ENST00000471968 OR4A47Q6IF82 309 aa4.52□□□□□ -1.69
HDAC3-206ENST00000471968 TBPL2Q6SJ96 375 aa4.52□□□□□ -1.69
HDAC3-206ENST00000471968 CLEC19AQ6UXS0 136 aa4.52□□□□□ -1.69
HDAC3-206ENST00000471968 GPHB5Q86YW7 130 aa4.52□□□□□ -1.69
HDAC3-206ENST00000471968 OR10A7Q8NGE5 316 aa4.52□□□□□ -1.69
HDAC3-206ENST00000471968 DYDC1Q8WWB3 177 aa4.52□□□□□ -1.69
HDAC3-206ENST00000471968 GTF2H4Q92759 462 aa4.52□□□□□ -1.69
HDAC3-206ENST00000471968 FAM46BQ96A09 425 aa4.52□□□□□ -1.69
HDAC3-206ENST00000471968 MRPL20Q9BYC9 149 aaKnown RBP4.52□□□□□ -1.69
HDAC3-206ENST00000471968 AKIP1Q9NQ31 210 aa4.52□□□□□ -1.69
HDAC3-206ENST00000471968 TMEM14BQ9NUH8 114 aa4.52□□□□□ -1.69
HDAC3-206ENST00000471968 LGALS13Q9UHV8 139 aa4.52□□□□□ -1.69
HDAC3-206ENST00000471968 SAMD4AQ9UPU9 718 aaKnown RBP4.52□□□□□ -1.69
HDAC3-206ENST00000471968 DMRT1Q9Y5R6 373 aa4.52□□□□□ -1.69
HDAC3-206ENST00000471968 A0A087WUU8 490 aa4.51□□□□□ -1.69
HDAC3-206ENST00000471968 TRBV2A0A0J9YWF9 115 aa4.51□□□□□ -1.69
HDAC3-206ENST00000471968 A6NIN4 97 aa4.51□□□□□ -1.69
HDAC3-206ENST00000471968 H2BFMP0C1H6 154 aa4.51□□□□□ -1.69
HDAC3-206ENST00000471968 C8orf88P0DMB2 117 aa4.51□□□□□ -1.69
HDAC3-206ENST00000471968 APELAP0DMC3 54 aa4.51□□□□□ -1.69
HDAC3-206ENST00000471968 IGFBP3P17936 291 aaPredicted RBP4.51□□□□□ -1.69
HDAC3-206ENST00000471968 GSTT1P30711 240 aa4.51□□□□□ -1.69
HDAC3-206ENST00000471968 OPRL1P41146 370 aa4.51□□□□□ -1.69
HDAC3-206ENST00000471968 FXYD6P3P58550 94 aa4.51□□□□□ -1.69
HDAC3-206ENST00000471968 STX3Q13277 289 aa4.51□□□□□ -1.69
HDAC3-206ENST00000471968 CLINT1Q14677 625 aa4.51□□□□□ -1.69
HDAC3-206ENST00000471968 PTGES3Q15185 160 aaKnown RBP4.51□□□□□ -1.69
HDAC3-206ENST00000471968 FAM106AQ4KMX7 169 aa4.51□□□□□ -1.69
HDAC3-206ENST00000471968 TEX30Q5JUR7 227 aa4.51□□□□□ -1.69
HDAC3-206ENST00000471968 CLVS2Q5SYC1 327 aa4.51□□□□□ -1.69
HDAC3-206ENST00000471968 LAMTOR1Q6IAA8 161 aa4.51□□□□□ -1.69
HDAC3-206ENST00000471968 ZNF730Q6ZMV8 503 aa4.51□□□□□ -1.69
HDAC3-206ENST00000471968 MSANTD1Q6ZTZ1 278 aa4.51□□□□□ -1.69
HDAC3-206ENST00000471968 MSRB3Q8IXL7 192 aa4.51□□□□□ -1.69
HDAC3-206ENST00000471968 Q8IYB0 196 aa4.51□□□□□ -1.69
HDAC3-206ENST00000471968 FAM86B1Q8N7N1 296 aa4.51□□□□□ -1.69
HDAC3-206ENST00000471968 C8orf31Q8N9H6 132 aa4.51□□□□□ -1.69
HDAC3-206ENST00000471968 MZB1Q8WU39 189 aa4.51□□□□□ -1.69
HDAC3-206ENST00000471968 RNF133Q8WVZ7 376 aa4.51□□□□□ -1.69
HDAC3-206ENST00000471968 MARC2Q969Z3 335 aa4.51□□□□□ -1.69
HDAC3-206ENST00000471968 DAZAP1Q96EP5 407 aaKnown RBP4.51□□□□□ -1.69
HDAC3-206ENST00000471968 AMELYQ99218 206 aa4.51□□□□□ -1.69
HDAC3-206ENST00000471968 NIPSNAP3BQ9BS92 247 aa4.51□□□□□ -1.69
HDAC3-206ENST00000471968 TMEM120AQ9BXJ8 343 aa4.51□□□□□ -1.69
HDAC3-206ENST00000471968 DCAF13Q9NV06 445 aaKnown RBP4.51□□□□□ -1.69
HDAC3-206ENST00000471968 MRPL27Q9P0M9 148 aaKnown RBP4.51□□□□□ -1.69
HDAC3-206ENST00000471968 RCC2Q9P258 522 aaKnown RBP4.51□□□□□ -1.69
HDAC3-206ENST00000471968 A6NHS1 94 aa4.5□□□□□ -1.69
HDAC3-206ENST00000471968 SLC33A1O00400 549 aaPredicted RBP4.5□□□□□ -1.69
HDAC3-206ENST00000471968 BIRC5O15392 142 aa4.5□□□□□ -1.69
HDAC3-206ENST00000471968 LANCL1O43813 399 aa4.5□□□□□ -1.69
HDAC3-206ENST00000471968 PROP1O75360 226 aa4.5□□□□□ -1.69
HDAC3-206ENST00000471968 PRH1P02810 166 aa4.5□□□□□ -1.69
HDAC3-206ENST00000471968 REG1AP05451 166 aa4.5□□□□□ -1.69
HDAC3-206ENST00000471968 BPGMP07738 259 aa4.5□□□□□ -1.69
HDAC3-206ENST00000471968 C4BPBP20851 252 aa4.5□□□□□ -1.69
HDAC3-206ENST00000471968 TFPI2P48307 235 aa4.5□□□□□ -1.69
HDAC3-206ENST00000471968 ZNF134P52741 427 aa4.5□□□□□ -1.69
HDAC3-206ENST00000471968 KLF10Q13118 480 aa4.5□□□□□ -1.69
HDAC3-206ENST00000471968 UNQ9165/PRO28630Q6UXU0 137 aa4.5□□□□□ -1.69
HDAC3-206ENST00000471968 MBOAT2Q6ZWT7 520 aa4.5□□□□□ -1.69
HDAC3-206ENST00000471968 SCXQ7RTU7 201 aa4.5□□□□□ -1.69
HDAC3-206ENST00000471968 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.5□□□□□ -1.69
HDAC3-206ENST00000471968 OR52L2PQ8NGH6 319 aa4.5□□□□□ -1.69
HDAC3-206ENST00000471968 TSC22D3Q99576 134 aa4.5□□□□□ -1.69
HDAC3-206ENST00000471968 ABHD6Q9BV23 337 aa4.5□□□□□ -1.69
HDAC3-206ENST00000471968 TMEM109Q9BVC6 243 aa4.5□□□□□ -1.69
HDAC3-206ENST00000471968 GPR84Q9NQS5 396 aa4.5□□□□□ -1.69
HDAC3-206ENST00000471968 GFOD1Q9NXC2 390 aa4.5□□□□□ -1.69
HDAC3-206ENST00000471968 METTL1Q9UBP6 276 aaKnown RBP4.5□□□□□ -1.69
HDAC3-206ENST00000471968 RAP2CQ9Y3L5 183 aa4.5□□□□□ -1.69
HDAC3-206ENST00000471968 TNFRSF18Q9Y5U5 241 aa4.5□□□□□ -1.69
HDAC3-206ENST00000471968 SNX5Q9Y5X3 404 aa4.5□□□□□ -1.69
HDAC3-206ENST00000471968 IGKV1-27A0A075B6S5 117 aa4.49□□□□□ -1.69
HDAC3-206ENST00000471968 FAM223BA6NKX1 122 aa4.49□□□□□ -1.69
HDAC3-206ENST00000471968 TRPC5OSA6NMA1 111 aa4.49□□□□□ -1.69
HDAC3-206ENST00000471968 SLC22A1O15245 554 aa4.49□□□□□ -1.69
HDAC3-206ENST00000471968 CCDC22O60826 627 aa4.49□□□□□ -1.69
HDAC3-206ENST00000471968 C1QBP02746 253 aa4.49□□□□□ -1.69
HDAC3-206ENST00000471968 RPSAP08865 295 aaKnown RBP4.49□□□□□ -1.69
HDAC3-206ENST00000471968 ATP6V1B1P15313 513 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms