RNA–Protein interactions for RNA: ENST00000471439.1

VPS13A-210, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-210ENST00000471439 KCNIP1Q9NZI2 227 aa2.46□□□□□ -2.02
VPS13A-210ENST00000471439 SLC22A14Q9Y267 594 aa2.46□□□□□ -2.02
VPS13A-210ENST00000471439 IZUMO1RA6ND01 250 aa2.45□□□□□ -2.02
VPS13A-210ENST00000471439 OR11H12B2RN74 326 aa2.45□□□□□ -2.02
VPS13A-210ENST00000471439 E5RI56 91 aa2.45□□□□□ -2.02
VPS13A-210ENST00000471439 OR7A10O76100 309 aa2.45□□□□□ -2.02
VPS13A-210ENST00000471439 CD7P09564 240 aa2.45□□□□□ -2.02
VPS13A-210ENST00000471439 SSR1P43307 286 aaKnown RBP2.45□□□□□ -2.02
VPS13A-210ENST00000471439 DYNLT3P51808 116 aa2.45□□□□□ -2.02
VPS13A-210ENST00000471439 CRISP3P54108 245 aa2.45□□□□□ -2.02
VPS13A-210ENST00000471439 OR2B6P58173 313 aa2.45□□□□□ -2.02
VPS13A-210ENST00000471439 GPX6P59796 221 aa2.45□□□□□ -2.02
VPS13A-210ENST00000471439 SARNPP82979 210 aaKnown RBP2.45□□□□□ -2.02
VPS13A-210ENST00000471439 PITPNAQ00169 270 aa2.45□□□□□ -2.02
VPS13A-210ENST00000471439 SSX2Q16385 188 aa2.45□□□□□ -2.02
VPS13A-210ENST00000471439 DGUOKQ16854 277 aa2.45□□□□□ -2.02
VPS13A-210ENST00000471439 TTLL9Q3SXZ7 439 aa2.45□□□□□ -2.02
VPS13A-210ENST00000471439 LDLRAD2Q5SZI1 272 aa2.45□□□□□ -2.02
VPS13A-210ENST00000471439 RESP18Q5W5W9 173 aa2.45□□□□□ -2.02
VPS13A-210ENST00000471439 ARL9Q6T311 187 aa2.45□□□□□ -2.02
VPS13A-210ENST00000471439 C19orf35Q6ZS72 473 aa2.45□□□□□ -2.02
VPS13A-210ENST00000471439 SLC30A8Q8IWU4 369 aa2.45□□□□□ -2.02
VPS13A-210ENST00000471439 MKXQ8IYA7 352 aa2.45□□□□□ -2.02
VPS13A-210ENST00000471439 CPNE9Q8IYJ1 553 aa2.45□□□□□ -2.02
VPS13A-210ENST00000471439 RNF175Q8N4F7 328 aa2.45□□□□□ -2.02
VPS13A-210ENST00000471439 Q8N9W7 124 aa2.45□□□□□ -2.02
VPS13A-210ENST00000471439 OR13C2Q8NGS9 318 aa2.45□□□□□ -2.02
VPS13A-210ENST00000471439 SLC25A40Q8TBP6 338 aa2.45□□□□□ -2.02
VPS13A-210ENST00000471439 ACOT11Q8WXI4 607 aaPredicted RBP2.45□□□□□ -2.02
VPS13A-210ENST00000471439 OR5B12Q96R08 314 aa2.45□□□□□ -2.02
VPS13A-210ENST00000471439 VAT1Q99536 393 aa2.45□□□□□ -2.02
VPS13A-210ENST00000471439 NRIP2Q9BQI9 281 aa2.45□□□□□ -2.02
VPS13A-210ENST00000471439 TMEM70Q9BUB7 260 aa2.45□□□□□ -2.02
VPS13A-210ENST00000471439 GGTLC1Q9BX51 225 aa2.45□□□□□ -2.02
VPS13A-210ENST00000471439 FRMD8P1Q9BZ68 369 aaPredicted RBP2.45□□□□□ -2.02
VPS13A-210ENST00000471439 LINC00470Q9BZP3 86 aa2.45□□□□□ -2.02
VPS13A-210ENST00000471439 OR2J1Q9GZK6 312 aa2.45□□□□□ -2.02
VPS13A-210ENST00000471439 OR51B5Q9H339 312 aa2.45□□□□□ -2.02
VPS13A-210ENST00000471439 ELOVL6Q9H5J4 265 aa2.45□□□□□ -2.02
VPS13A-210ENST00000471439 A0A0A6YYD5 115 aa2.44□□□□□ -2.02
VPS13A-210ENST00000471439 TRAV10A0A0B4J240 114 aa2.44□□□□□ -2.02
VPS13A-210ENST00000471439 SERPINE3A8MV23 424 aa2.44□□□□□ -2.02
VPS13A-210ENST00000471439 ZNF99A8MXY4 864 aaPredicted RBP2.44□□□□□ -2.02
VPS13A-210ENST00000471439 H0Y980 276 aa2.44□□□□□ -2.02
VPS13A-210ENST00000471439 SNAP29O95721 258 aa2.44□□□□□ -2.02
VPS13A-210ENST00000471439 UCHL3P15374 230 aa2.44□□□□□ -2.02
VPS13A-210ENST00000471439 CD24P25063 80 aa2.44□□□□□ -2.02
VPS13A-210ENST00000471439 CALRP27797 417 aaKnown RBP2.44□□□□□ -2.02
VPS13A-210ENST00000471439 AQP5P55064 265 aa2.44□□□□□ -2.02
VPS13A-210ENST00000471439 DYNLT1P63172 113 aa2.44□□□□□ -2.02
VPS13A-210ENST00000471439 ZNF181Q2M3W8 571 aa2.44□□□□□ -2.02
VPS13A-210ENST00000471439 ZNF678Q5SXM1 525 aa2.44□□□□□ -2.02
VPS13A-210ENST00000471439 HHATQ5VTY9 493 aa2.44□□□□□ -2.02
VPS13A-210ENST00000471439 LCN12Q6JVE5 192 aa2.44□□□□□ -2.02
VPS13A-210ENST00000471439 ZNF621Q6ZSS3 439 aa2.44□□□□□ -2.02
VPS13A-210ENST00000471439 H2BFWTQ7Z2G1 175 aa2.44□□□□□ -2.02
VPS13A-210ENST00000471439 FNDC5Q8NAU1 212 aa2.44□□□□□ -2.02
VPS13A-210ENST00000471439 NPBQ8NG41 125 aa2.44□□□□□ -2.02
VPS13A-210ENST00000471439 PYROXD1Q8WU10 500 aa2.44□□□□□ -2.02
VPS13A-210ENST00000471439 CAPSLQ8WWF8 208 aa2.44□□□□□ -2.02
VPS13A-210ENST00000471439 FAM104AQ969W3 186 aa2.44□□□□□ -2.02
VPS13A-210ENST00000471439 OR8B4Q96RC9 309 aa2.44□□□□□ -2.02
VPS13A-210ENST00000471439 CNN2Q99439 309 aaKnown RBP2.44□□□□□ -2.02
VPS13A-210ENST00000471439 SCRT1Q9BWW7 348 aa2.44□□□□□ -2.02
VPS13A-210ENST00000471439 LCE3DQ9BYE3 92 aa2.44□□□□□ -2.02
VPS13A-210ENST00000471439 CALYQ9NYX4 217 aa2.44□□□□□ -2.02
VPS13A-210ENST00000471439 FBXL3Q9UKT7 428 aa2.44□□□□□ -2.02
VPS13A-210ENST00000471439 LOC102724200A0A096LPH7 203 aaPredicted RBP2.43□□□□□ -2.02
VPS13A-210ENST00000471439 IGKV1D-13A0A0B4J2D9 117 aa2.43□□□□□ -2.02
VPS13A-210ENST00000471439 M0R1W7 72 aa2.43□□□□□ -2.02
VPS13A-210ENST00000471439 DEFB4AO15263 64 aa2.43□□□□□ -2.02
VPS13A-210ENST00000471439 GYPAP02724 150 aa2.43□□□□□ -2.02
VPS13A-210ENST00000471439 C8GP07360 202 aa2.43□□□□□ -2.02
VPS13A-210ENST00000471439 IGKV1-13P0DP09 117 aa2.43□□□□□ -2.02
VPS13A-210ENST00000471439 TBPP20226 339 aa2.43□□□□□ -2.02
VPS13A-210ENST00000471439 KDELR1P24390 212 aa2.43□□□□□ -2.02
VPS13A-210ENST00000471439 IVDP26440 423 aa2.43□□□□□ -2.02
VPS13A-210ENST00000471439 NPBWR2P48146 333 aa2.43□□□□□ -2.02
VPS13A-210ENST00000471439 P2RX1P51575 399 aa2.43□□□□□ -2.02
VPS13A-210ENST00000471439 CCR6P51684 374 aa2.43□□□□□ -2.02
VPS13A-210ENST00000471439 PSMD4P55036 377 aaKnown RBP2.43□□□□□ -2.02
VPS13A-210ENST00000471439 FGF8P55075 233 aaPredicted RBP2.43□□□□□ -2.02
VPS13A-210ENST00000471439 MRPL28Q13084 256 aaKnown RBP2.43□□□□□ -2.02
VPS13A-210ENST00000471439 QPRTQ15274 297 aa2.43□□□□□ -2.02
VPS13A-210ENST00000471439 MPPED2Q15777 294 aa2.43□□□□□ -2.02
VPS13A-210ENST00000471439 MAPK14Q16539 360 aa2.43□□□□□ -2.02
VPS13A-210ENST00000471439 NDUFAF6Q330K2 333 aa2.43□□□□□ -2.02
VPS13A-210ENST00000471439 LRRC10Q5BKY1 277 aa2.43□□□□□ -2.02
VPS13A-210ENST00000471439 C6orf226Q5I0X4 101 aa2.43□□□□□ -2.02
VPS13A-210ENST00000471439 NOXRED1Q6NXP6 359 aa2.43□□□□□ -2.02
VPS13A-210ENST00000471439 ZYG11AQ6WRX3 759 aa2.43□□□□□ -2.02
VPS13A-210ENST00000471439 PGAM4Q8N0Y7 254 aa2.43□□□□□ -2.02
VPS13A-210ENST00000471439 STPG2Q8N412 459 aa2.43□□□□□ -2.02
VPS13A-210ENST00000471439 ZNF561Q8N587 486 aa2.43□□□□□ -2.02
VPS13A-210ENST00000471439 EEF1AKMT1Q8WVE0 214 aa2.43□□□□□ -2.02
VPS13A-210ENST00000471439 RCN3Q96D15 328 aa2.43□□□□□ -2.02
VPS13A-210ENST00000471439 ZNF488Q96MN9 340 aa2.43□□□□□ -2.02
VPS13A-210ENST00000471439 CHRDL1Q9BU40 450 aa2.43□□□□□ -2.02
VPS13A-210ENST00000471439 SLCO1B3Q9NPD5 702 aa2.43□□□□□ -2.02
VPS13A-210ENST00000471439 XCL2Q9UBD3 114 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms