RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 CLEC18AA5D8T8 446 aa11.77□□□□□ -0.53
NPHP4-207ENST00000470763 BRS3P32247 399 aa11.77□□□□□ -0.53
NPHP4-207ENST00000470763 GAGE1Q13065 139 aa11.77□□□□□ -0.53
NPHP4-207ENST00000470763 SHBQ15464 509 aa11.77□□□□□ -0.53
NPHP4-207ENST00000470763 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.77□□□□□ -0.53
NPHP4-207ENST00000470763 ARL6IP6Q8N6S5 226 aa11.77□□□□□ -0.53
NPHP4-207ENST00000470763 ZNF525Q8N782 197 aa11.77□□□□□ -0.53
NPHP4-207ENST00000470763 CLEC18CQ8NCF0 446 aa11.77□□□□□ -0.53
NPHP4-207ENST00000470763 MRGPRX4Q96LA9 322 aa11.77□□□□□ -0.53
NPHP4-207ENST00000470763 ZNF385AQ96PM9 386 aaKnown RBP11.77□□□□□ -0.53
NPHP4-207ENST00000470763 ESPL1Q14674 2120 aa11.77□□□□□ -0.53
NPHP4-207ENST00000470763 M0QZK8 103 aa11.77□□□□□ -0.53
NPHP4-207ENST00000470763 TCF21O43680 179 aa11.77□□□□□ -0.53
NPHP4-207ENST00000470763 TLX3O43711 291 aaPredicted RBP11.77□□□□□ -0.53
NPHP4-207ENST00000470763 GGCTO75223 188 aaKnown RBP11.77□□□□□ -0.53
NPHP4-207ENST00000470763 ARL4DP49703 201 aa11.77□□□□□ -0.53
NPHP4-207ENST00000470763 CNN3Q15417 329 aaKnown RBP11.77□□□□□ -0.53
NPHP4-207ENST00000470763 ANKRD39Q53RE8 183 aa11.77□□□□□ -0.53
NPHP4-207ENST00000470763 Q6ZRM9 215 aa11.77□□□□□ -0.53
NPHP4-207ENST00000470763 HAPLN4Q86UW8 402 aa11.77□□□□□ -0.53
NPHP4-207ENST00000470763 RPP25LQ8N5L8 163 aaKnown RBP11.77□□□□□ -0.53
NPHP4-207ENST00000470763 ZNF292O60281 2723 aa11.76□□□□□ -0.53
NPHP4-207ENST00000470763 UBE2L5PA0A1B0GUS4 154 aa11.76□□□□□ -0.53
NPHP4-207ENST00000470763 GRIFINA4D1Z8 144 aa11.76□□□□□ -0.53
NPHP4-207ENST00000470763 NRASP01111 189 aa11.76□□□□□ -0.53
NPHP4-207ENST00000470763 GYPAP02724 150 aa11.76□□□□□ -0.53
NPHP4-207ENST00000470763 LINC00614P0C842 121 aa11.76□□□□□ -0.53
NPHP4-207ENST00000470763 IL3RAP26951 378 aa11.76□□□□□ -0.53
NPHP4-207ENST00000470763 RBM11P57052 281 aaKnown RBP11.76□□□□□ -0.53
NPHP4-207ENST00000470763 TMEM41BQ5BJD5 291 aa11.76□□□□□ -0.53
NPHP4-207ENST00000470763 FAM69BQ5VUD6 431 aa11.76□□□□□ -0.53
NPHP4-207ENST00000470763 NABP1Q96AH0 204 aa11.76□□□□□ -0.53
NPHP4-207ENST00000470763 AGMATQ9BSE5 352 aa11.76□□□□□ -0.53
NPHP4-207ENST00000470763 METTL7AQ9H8H3 244 aa11.76□□□□□ -0.53
NPHP4-207ENST00000470763 TRAPPC1Q9Y5R8 145 aa11.76□□□□□ -0.53
NPHP4-207ENST00000470763 DCHS1Q96JQ0 3298 aa11.76□□□□□ -0.53
NPHP4-207ENST00000470763 PATE4P0C8F1 98 aa11.76□□□□□ -0.53
NPHP4-207ENST00000470763 BMP5P22003 454 aa11.76□□□□□ -0.53
NPHP4-207ENST00000470763 OTX1P32242 354 aaPredicted RBP11.76□□□□□ -0.53
NPHP4-207ENST00000470763 SUMO3P55854 103 aaPredicted RBP11.76□□□□□ -0.53
NPHP4-207ENST00000470763 TMEM211Q6ICI0 200 aa11.76□□□□□ -0.53
NPHP4-207ENST00000470763 CISD2Q8N5K1 135 aaKnown RBP11.76□□□□□ -0.53
NPHP4-207ENST00000470763 OR10G3Q8NGC4 313 aa11.76□□□□□ -0.53
NPHP4-207ENST00000470763 ZCCHC14Q8WYQ9 949 aaKnown RBP11.76□□□□□ -0.53
NPHP4-207ENST00000470763 EXTL1Q92935 676 aa11.76□□□□□ -0.53
NPHP4-207ENST00000470763 SPTSSAQ969W0 71 aa11.76□□□□□ -0.53
NPHP4-207ENST00000470763 RASL10BQ96S79 203 aa11.76□□□□□ -0.53
NPHP4-207ENST00000470763 FBRSQ9HAH7 460 aa11.76□□□□□ -0.53
NPHP4-207ENST00000470763 A0A0U1RQK1 487 aa11.75□□□□□ -0.53
NPHP4-207ENST00000470763 ZNF320A2RRD8 509 aa11.75□□□□□ -0.53
NPHP4-207ENST00000470763 DAZAP2Q15038 168 aaPredicted RBP11.75□□□□□ -0.53
NPHP4-207ENST00000470763 TCF23Q7RTU1 214 aa11.75□□□□□ -0.53
NPHP4-207ENST00000470763 CARFQ8N187 725 aa11.75□□□□□ -0.53
NPHP4-207ENST00000470763 PSENENQ9NZ42 101 aa11.75□□□□□ -0.53
NPHP4-207ENST00000470763 RIF1Q5UIP0 2472 aaKnown RBP11.75□□□□□ -0.53
NPHP4-207ENST00000470763 PSG2P11465 335 aa11.75□□□□□ -0.53
NPHP4-207ENST00000470763 DEFA4P12838 97 aa11.75□□□□□ -0.53
NPHP4-207ENST00000470763 EGR1P18146 543 aa11.75□□□□□ -0.53
NPHP4-207ENST00000470763 HIST1H3AP68431 136 aa11.75□□□□□ -0.53
NPHP4-207ENST00000470763 LHFPL2Q6ZUX7 228 aa11.75□□□□□ -0.53
NPHP4-207ENST00000470763 CENPVQ7Z7K6 275 aaPredicted RBP11.75□□□□□ -0.53
NPHP4-207ENST00000470763 LMX1AQ8TE12 382 aa11.75□□□□□ -0.53
NPHP4-207ENST00000470763 PIGCQ92535 297 aa11.75□□□□□ -0.53
NPHP4-207ENST00000470763 C10orf35Q96D05 121 aa11.75□□□□□ -0.53
NPHP4-207ENST00000470763 CACNG5Q9UF02 275 aa11.75□□□□□ -0.53
NPHP4-207ENST00000470763 PPIAL4AQ9Y536 164 aa11.75□□□□□ -0.53
NPHP4-207ENST00000470763 C1QTNF9BB2RNN3 333 aa11.75□□□□□ -0.53
NPHP4-207ENST00000470763 PSMB3P49720 205 aa11.75□□□□□ -0.53
NPHP4-207ENST00000470763 SPANXN5Q5MJ07 72 aa11.75□□□□□ -0.53
NPHP4-207ENST00000470763 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.75□□□□□ -0.53
NPHP4-207ENST00000470763 OR10V1Q8NGI7 309 aa11.75□□□□□ -0.53
NPHP4-207ENST00000470763 OR4C12Q96R67 309 aa11.75□□□□□ -0.53
NPHP4-207ENST00000470763 OR2J1Q9GZK6 312 aa11.75□□□□□ -0.53
NPHP4-207ENST00000470763 MANBALQ9NQG1 85 aa11.75□□□□□ -0.53
NPHP4-207ENST00000470763 PLSCR2Q9NRY7 297 aa11.75□□□□□ -0.53
NPHP4-207ENST00000470763 RNF150Q9ULK6 438 aa11.75□□□□□ -0.53
NPHP4-207ENST00000470763 CABIN1Q9Y6J0 2220 aa11.75□□□□□ -0.53
NPHP4-207ENST00000470763 AQP7P3A6NL99 342 aa11.74□□□□□ -0.53
NPHP4-207ENST00000470763 KIAA1324LA8MWY0 1029 aaPredicted RBP11.74□□□□□ -0.53
NPHP4-207ENST00000470763 SIAH2O43255 324 aa11.74□□□□□ -0.53
NPHP4-207ENST00000470763 PGLYRP1O75594 196 aaPredicted RBP11.74□□□□□ -0.53
NPHP4-207ENST00000470763 GABRG2P18507 467 aa11.74□□□□□ -0.53
NPHP4-207ENST00000470763 OR8B8Q15620 311 aa11.74□□□□□ -0.53
NPHP4-207ENST00000470763 PLCXD3Q63HM9 321 aa11.74□□□□□ -0.53
NPHP4-207ENST00000470763 NEK7Q8TDX7 302 aa11.74□□□□□ -0.53
NPHP4-207ENST00000470763 PSMG3Q9BT73 122 aaPredicted RBP11.74□□□□□ -0.53
NPHP4-207ENST00000470763 TRBV11-1A0A0K0K1C0 115 aa11.74□□□□□ -0.53
NPHP4-207ENST00000470763 SERPINE2P07093 398 aa11.74□□□□□ -0.53
NPHP4-207ENST00000470763 FASLGP48023 281 aa11.74□□□□□ -0.53
NPHP4-207ENST00000470763 LRRC75BQ2VPJ9 315 aa11.74□□□□□ -0.53
NPHP4-207ENST00000470763 DEFB133Q30KQ1 61 aa11.74□□□□□ -0.53
NPHP4-207ENST00000470763 OR8G2PQ6IF36 304 aa11.74□□□□□ -0.53
NPHP4-207ENST00000470763 ALKBH2Q6NS38 261 aa11.74□□□□□ -0.53
NPHP4-207ENST00000470763 OR5D13Q8NGL4 314 aa11.74□□□□□ -0.53
NPHP4-207ENST00000470763 RAB40CQ96S21 281 aa11.74□□□□□ -0.53
NPHP4-207ENST00000470763 SIT1Q9Y3P8 196 aa11.74□□□□□ -0.53
NPHP4-207ENST00000470763 DUXBA0A1W2PPF3 345 aa11.73□□□□□ -0.53
NPHP4-207ENST00000470763 SYNGR2O43760 224 aa11.73□□□□□ -0.53
NPHP4-207ENST00000470763 TRAPPC6AO75865 159 aa11.73□□□□□ -0.53
NPHP4-207ENST00000470763 CDKN1AP38936 164 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms