RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 KRTAP27-1Q3LI81 207 aa11.71□□□□□ -0.53
PTPRE-204ENST00000455661 OR4F5Q8NH21 305 aa11.71□□□□□ -0.53
PTPRE-204ENST00000455661 TAF15Q92804 592 aaKnown RBP eCLIP11.71□□□□□ -0.53
PTPRE-204ENST00000455661 OR4C12Q96R67 309 aa11.71□□□□□ -0.53
PTPRE-204ENST00000455661 OR4F4Q96R69 305 aa11.71□□□□□ -0.53
PTPRE-204ENST00000455661 IGHV1OR15-9A0A0B4J2B8 117 aa11.71□□□□□ -0.54
PTPRE-204ENST00000455661 IGKV1-6A0A0C4DH72 117 aa11.71□□□□□ -0.54
PTPRE-204ENST00000455661 LRP5LA4QPB2 252 aa11.71□□□□□ -0.54
PTPRE-204ENST00000455661 HSPB6O14558 160 aa11.71□□□□□ -0.54
PTPRE-204ENST00000455661 GYPAP02724 150 aa11.71□□□□□ -0.54
PTPRE-204ENST00000455661 GLB1P16278 677 aa11.71□□□□□ -0.54
PTPRE-204ENST00000455661 FGF12P61328 243 aa11.71□□□□□ -0.54
PTPRE-204ENST00000455661 PCBD1P61457 104 aa11.71□□□□□ -0.54
PTPRE-204ENST00000455661 PSG4Q00888 419 aa11.71□□□□□ -0.54
PTPRE-204ENST00000455661 IZUMO4Q1ZYL8 232 aa11.71□□□□□ -0.54
PTPRE-204ENST00000455661 OR10J5Q8NHC4 309 aa11.71□□□□□ -0.54
PTPRE-204ENST00000455661 BTF3L4Q96K17 158 aa11.71□□□□□ -0.54
PTPRE-204ENST00000455661 RIMS4Q9H426 269 aaPredicted RBP11.71□□□□□ -0.54
PTPRE-204ENST00000455661 MANBALQ9NQG1 85 aa11.71□□□□□ -0.54
PTPRE-204ENST00000455661 NAGKQ9UJ70 344 aa11.71□□□□□ -0.54
PTPRE-204ENST00000455661 OR2W1Q9Y3N9 320 aa11.71□□□□□ -0.54
PTPRE-204ENST00000455661 TIMM9Q9Y5J7 89 aa11.71□□□□□ -0.54
PTPRE-204ENST00000455661 SPAG17Q6Q759 2223 aa11.71□□□□□ -0.54
PTPRE-204ENST00000455661 MED12Q93074 2177 aa11.7□□□□□ -0.54
PTPRE-204ENST00000455661 TMEM210A6NLX4 147 aa11.7□□□□□ -0.54
PTPRE-204ENST00000455661 MBP02144 154 aa11.7□□□□□ -0.54
PTPRE-204ENST00000455661 B4GALT1P15291 398 aa11.7□□□□□ -0.54
PTPRE-204ENST00000455661 DSCR4P56555 118 aaPredicted RBP11.7□□□□□ -0.54
PTPRE-204ENST00000455661 GNB2P62879 340 aa11.7□□□□□ -0.54
PTPRE-204ENST00000455661 SPANXN5Q5MJ07 72 aa11.7□□□□□ -0.54
PTPRE-204ENST00000455661 CYB5R2Q6BCY4 276 aa11.7□□□□□ -0.54
PTPRE-204ENST00000455661 Q6ZRM9 215 aa11.7□□□□□ -0.54
PTPRE-204ENST00000455661 RPP25LQ8N5L8 163 aaKnown RBP11.7□□□□□ -0.54
PTPRE-204ENST00000455661 CPT1CQ8TCG5 803 aa11.7□□□□□ -0.54
PTPRE-204ENST00000455661 SF3B5Q9BWJ5 86 aaKnown RBP11.7□□□□□ -0.54
PTPRE-204ENST00000455661 OR2H1Q9GZK4 316 aa11.7□□□□□ -0.54
PTPRE-204ENST00000455661 KIAA0100Q14667 2235 aaKnown RBP11.7□□□□□ -0.54
PTPRE-204ENST00000455661 UNC13CQ8NB66 2214 aa11.7□□□□□ -0.54
PTPRE-204ENST00000455661 UBE2L5PA0A1B0GUS4 154 aa11.7□□□□□ -0.54
PTPRE-204ENST00000455661 TNFSF11O14788 317 aa11.7□□□□□ -0.54
PTPRE-204ENST00000455661 DKK1O94907 266 aa11.7□□□□□ -0.54
PTPRE-204ENST00000455661 VENTXO95231 258 aa11.7□□□□□ -0.54
PTPRE-204ENST00000455661 LCN2P80188 198 aa11.7□□□□□ -0.54
PTPRE-204ENST00000455661 DCAF10Q5QP82 559 aa11.7□□□□□ -0.54
PTPRE-204ENST00000455661 WDR74Q6RFH5 385 aaPredicted RBP11.7□□□□□ -0.54
PTPRE-204ENST00000455661 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.7□□□□□ -0.54
PTPRE-204ENST00000455661 HAPLN4Q86UW8 402 aa11.7□□□□□ -0.54
PTPRE-204ENST00000455661 TSTD1Q8NFU3 115 aa11.7□□□□□ -0.54
PTPRE-204ENST00000455661 CLDN23Q96B33 292 aa11.7□□□□□ -0.54
PTPRE-204ENST00000455661 CLEC1BQ9P126 229 aa11.7□□□□□ -0.54
PTPRE-204ENST00000455661 TRANK1O15050 2925 aa11.7□□□□□ -0.54
PTPRE-204ENST00000455661 KIR2DL5BA0A0G2JN68 375 aa11.69□□□□□ -0.54
PTPRE-204ENST00000455661 KIR2DL5BA0A0G2JPC4 375 aa11.69□□□□□ -0.54
PTPRE-204ENST00000455661 CTXND1A0A1B0GTU2 59 aa11.69□□□□□ -0.54
PTPRE-204ENST00000455661 SLC38A11Q08AI6 406 aa11.69□□□□□ -0.54
PTPRE-204ENST00000455661 SAXO1Q8IYX7 474 aa11.69□□□□□ -0.54
PTPRE-204ENST00000455661 KIR2DL5AQ8N109 375 aa11.69□□□□□ -0.54
PTPRE-204ENST00000455661 THOC3Q96J01 351 aaKnown RBP11.69□□□□□ -0.54
PTPRE-204ENST00000455661 WNT5BQ9H1J7 359 aa11.69□□□□□ -0.54
PTPRE-204ENST00000455661 ERRFI1Q9UJM3 462 aaPredicted RBP11.69□□□□□ -0.54
PTPRE-204ENST00000455661 POLR3KQ9Y2Y1 108 aaPredicted RBP11.69□□□□□ -0.54
PTPRE-204ENST00000455661 CBY1Q9Y3M2 126 aa11.69□□□□□ -0.54
PTPRE-204ENST00000455661 TRAPPC1Q9Y5R8 145 aa11.69□□□□□ -0.54
PTPRE-204ENST00000455661 GJE1A6NN92 205 aa11.69□□□□□ -0.54
PTPRE-204ENST00000455661 MARCH11A6NNE9 402 aa11.69□□□□□ -0.54
PTPRE-204ENST00000455661 ZNF705FA8MVS1 300 aaPredicted RBP11.69□□□□□ -0.54
PTPRE-204ENST00000455661 SCRG1O75711 98 aa11.69□□□□□ -0.54
PTPRE-204ENST00000455661 ZNF705DP0CH99 300 aaPredicted RBP11.69□□□□□ -0.54
PTPRE-204ENST00000455661 ZNF705BP0CI00 300 aaPredicted RBP11.69□□□□□ -0.54
PTPRE-204ENST00000455661 MYF5P13349 255 aa11.69□□□□□ -0.54
PTPRE-204ENST00000455661 PCSK4Q6UW60 755 aa11.69□□□□□ -0.54
PTPRE-204ENST00000455661 ZNF705AQ6ZN79 300 aaPredicted RBP11.69□□□□□ -0.54
PTPRE-204ENST00000455661 MRPL52Q86TS9 123 aaKnown RBP11.69□□□□□ -0.54
PTPRE-204ENST00000455661 WNT16Q9UBV4 365 aa11.69□□□□□ -0.54
PTPRE-204ENST00000455661 CHD3Q12873 2000 aaKnown RBP11.68□□□□□ -0.54
PTPRE-204ENST00000455661 A0A0J9YW62 118 aa11.68□□□□□ -0.54
PTPRE-204ENST00000455661 EPOPA6NHQ4 379 aa11.68□□□□□ -0.54
PTPRE-204ENST00000455661 TRAPPC2LH3BP13 241 aa11.68□□□□□ -0.54
PTPRE-204ENST00000455661 PDGFBP01127 241 aaPredicted RBP11.68□□□□□ -0.54
PTPRE-204ENST00000455661 RPLP1P05386 114 aaKnown RBP11.68□□□□□ -0.54
PTPRE-204ENST00000455661 RAC1P63000 192 aa11.68□□□□□ -0.54
PTPRE-204ENST00000455661 PRDX4Q13162 271 aa11.68□□□□□ -0.54
PTPRE-204ENST00000455661 TRIM61Q5EBN2 209 aa11.68□□□□□ -0.54
PTPRE-204ENST00000455661 ZNF324BQ6AW86 544 aaPredicted RBP11.68□□□□□ -0.54
PTPRE-204ENST00000455661 MKXQ8IYA7 352 aa11.68□□□□□ -0.54
PTPRE-204ENST00000455661 NEIL1Q96FI4 390 aaPredicted RBP11.68□□□□□ -0.54
PTPRE-204ENST00000455661 MS4A10Q96PG2 267 aa11.68□□□□□ -0.54
PTPRE-204ENST00000455661 OR6C1Q96RD1 312 aa11.68□□□□□ -0.54
PTPRE-204ENST00000455661 IMMP2LQ96T52 175 aa11.68□□□□□ -0.54
PTPRE-204ENST00000455661 FOXB1Q99853 325 aa11.68□□□□□ -0.54
PTPRE-204ENST00000455661 STRADBQ9C0K7 418 aa11.68□□□□□ -0.54
PTPRE-204ENST00000455661 SLC25A22Q9H936 323 aa11.68□□□□□ -0.54
PTPRE-204ENST00000455661 GOLT1BQ9Y3E0 138 aa11.68□□□□□ -0.54
PTPRE-204ENST00000455661 HMGB3O15347 200 aaKnown RBP11.68□□□□□ -0.54
PTPRE-204ENST00000455661 SOX15O60248 233 aa11.68□□□□□ -0.54
PTPRE-204ENST00000455661 TIAF1O95411 115 aa11.68□□□□□ -0.54
PTPRE-204ENST00000455661 IGKV1D-33P01593 117 aa11.68□□□□□ -0.54
PTPRE-204ENST00000455661 IGKV1-33P01594 117 aa11.68□□□□□ -0.54
PTPRE-204ENST00000455661 WNT2P09544 360 aa11.68□□□□□ -0.54
PTPRE-204ENST00000455661 EDN3P14138 238 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms