RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 GAGE2EQ4V326 116 aa3.57□□□□□ -1.84
SBDSP1-204ENST00000453858 ZNF57Q68EA5 555 aaPredicted RBP3.57□□□□□ -1.84
SBDSP1-204ENST00000453858 GAGE2AQ6NT46 116 aa3.57□□□□□ -1.84
SBDSP1-204ENST00000453858 HAGHLQ6PII5 290 aaPredicted RBP3.57□□□□□ -1.84
SBDSP1-204ENST00000453858 CCDC190Q86UF4 302 aa3.57□□□□□ -1.84
SBDSP1-204ENST00000453858 CACNG8Q8WXS5 425 aa3.57□□□□□ -1.84
SBDSP1-204ENST00000453858 SPTSSAQ969W0 71 aa3.57□□□□□ -1.84
SBDSP1-204ENST00000453858 VPS33AQ96AX1 596 aa3.57□□□□□ -1.84
SBDSP1-204ENST00000453858 REEP6Q96HR9 211 aa3.57□□□□□ -1.84
SBDSP1-204ENST00000453858 TSSK2Q96PF2 358 aa3.57□□□□□ -1.84
SBDSP1-204ENST00000453858 BTBD10Q9BSF8 475 aa3.57□□□□□ -1.84
SBDSP1-204ENST00000453858 SYT4Q9H2B2 425 aa3.57□□□□□ -1.84
SBDSP1-204ENST00000453858 Q9H3A6 140 aa3.57□□□□□ -1.84
SBDSP1-204ENST00000453858 GAL3ST2Q9H3Q3 398 aa3.57□□□□□ -1.84
SBDSP1-204ENST00000453858 FNDC4Q9H6D8 234 aaPredicted RBP3.57□□□□□ -1.84
SBDSP1-204ENST00000453858 GAGE2DQ9UEU5 116 aa3.57□□□□□ -1.84
SBDSP1-204ENST00000453858 EMCNQ9ULC0 261 aa3.57□□□□□ -1.84
SBDSP1-204ENST00000453858 LINC00588Q9Y4M8 146 aa3.57□□□□□ -1.84
SBDSP1-204ENST00000453858 A0A087WTM6 91 aa3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 TRAV25A0A0B4J276 109 aa3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 C13orf42A0A1B0GVH6 325 aa3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 A0A1W2PS18 150 aa3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 CPSF4LA6NMK7 179 aaKnown RBP3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 FCN1O00602 326 aa3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 B3GALNT1O75752 331 aa3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 KRT36O76013 467 aa3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 NXPH2O95156 264 aa3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 KRT75O95678 551 aa3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 C1QBP02746 253 aa3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 PSKH1P11801 424 aa3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 MIFP14174 115 aa3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 MFAP4P55083 255 aa3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 NAA20P61599 178 aa3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 NCALDP61601 193 aa3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 RPS27AP62979 156 aaKnown RBP3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 CX3CL1P78423 397 aa3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 GAGE5Q13069 117 aa3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 GAGE6Q13070 117 aa3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 IRF3Q14653 427 aa3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 TMEM187Q14656 261 aa3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 GRK1Q15835 563 aa3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 C5orf64Q2M2E5 130 aa3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 ZNF585BQ52M93 769 aa3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 ACTBL2Q562R1 376 aa3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 KIRREL3Q8IZU9 778 aa3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 RDH10Q8IZV5 341 aa3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 TRIML2Q8N7C3 387 aa3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 RNF148Q8N7C7 305 aa3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 FNDC5Q8NAU1 212 aa3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 OR8B12Q8NGG6 310 aa3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 TWIST2Q8WVJ9 160 aa3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 RTN4IP1Q8WWV3 396 aaPredicted RBP3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 RASSF5Q8WWW0 418 aa3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 PIGCQ92535 297 aa3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 EMG1Q92979 244 aaKnown RBP3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 PANX1Q96RD7 426 aa3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 CHST6Q9GZX3 395 aa3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 RAD21L1Q9H4I0 556 aa3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 Q9H8V8 135 aa3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 NMNAT1Q9HAN9 279 aaPredicted RBP3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 ABCB9Q9NP78 766 aa3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 BLOC1S6Q9UL45 172 aa3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 POLR1DQ9Y2S0 133 aa3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 JRKLQ9Y4A0 524 aa3.56□□□□□ -1.84
SBDSP1-204ENST00000453858 TRGV10A0A0A0MS01 117 aa3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 KBTBD11-OT1A0A1B0GTJ5 212 aa3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 TMEM213A2RRL7 107 aa3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 LOC110117498-PIK3R3F6TDL0 507 aa3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 PANO1I0J062 215 aa3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 TYROBPO43914 113 aa3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 CD14P08571 375 aa3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 DNAH10OSP0CZ25 163 aa3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 HOXB6P17509 224 aaKnown RBP3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 MPZP25189 248 aa3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 SLC15A1P46059 708 aa3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 OR3A1P47881 315 aa3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 PRKXP51817 358 aa3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 EIF2B1Q14232 305 aaKnown RBP3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 MORN3Q6PF18 240 aaPredicted RBP3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 FAM131AQ6UXB0 335 aa3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 TRAPPC6BQ86SZ2 158 aa3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 BATF2Q8N1L9 274 aa3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 POC5Q8NA72 575 aa3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 NPBQ8NG41 125 aa3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 OR2AK2Q8NG84 335 aa3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 GPR32P1Q8NGA4 272 aa3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 OR5A2Q8NGI9 324 aa3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 OR4D6Q8NGJ1 314 aa3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 OR1L6Q8NGR2 347 aa3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 OR5B3Q8NH48 314 aa3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 ACTRT1Q8TDG2 376 aa3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 CD300LFQ8TDQ1 290 aa3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 RDH12Q96NR8 316 aa3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 OSBPL10Q9BXB5 764 aa3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 CST11Q9H112 138 aa3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 TPT1P8Q9HAU6 139 aa3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 CACYBPQ9HB71 228 aaKnown RBP3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 MRPL22Q9NWU5 206 aaKnown RBP3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 THUMPD1Q9NXG2 353 aaKnown RBP3.55□□□□□ -1.84
SBDSP1-204ENST00000453858 RCC2Q9P258 522 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms