RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 DLX2Q07687 328 aaPredicted RBP15.99■□□□□ 0.15
PTPA-223ENST00000452489 RD3Q7Z3Z2 195 aa15.99■□□□□ 0.15
PTPA-223ENST00000452489 ZNF501Q96CX3 271 aaPredicted RBP15.99■□□□□ 0.15
PTPA-223ENST00000452489 MRGPRX1Q96LB2 322 aa15.99■□□□□ 0.15
PTPA-223ENST00000452489 HDAC8Q9BY41 377 aa15.99■□□□□ 0.15
PTPA-223ENST00000452489 A0A0G2JRQ6 117 aa15.98■□□□□ 0.15
PTPA-223ENST00000452489 VENTXO95231 258 aa15.98■□□□□ 0.15
PTPA-223ENST00000452489 CCL1P22362 96 aa15.98■□□□□ 0.15
PTPA-223ENST00000452489 ZNF596Q8TC21 504 aa15.98■□□□□ 0.15
PTPA-223ENST00000452489 LRRC3BQ96PB8 259 aa15.98■□□□□ 0.15
PTPA-223ENST00000452489 UHRF2Q96PU4 802 aa15.98■□□□□ 0.15
PTPA-223ENST00000452489 CCDC3Q9BQI4 270 aa15.98■□□□□ 0.15
PTPA-223ENST00000452489 PRTFDC1Q9NRG1 225 aa15.98■□□□□ 0.15
PTPA-223ENST00000452489 OR5B21A6NL26 309 aa15.98■□□□□ 0.15
PTPA-223ENST00000452489 SPRY1O43609 319 aaPredicted RBP15.98■□□□□ 0.15
PTPA-223ENST00000452489 GPX1P07203 203 aa15.98■□□□□ 0.15
PTPA-223ENST00000452489 DUSP3P51452 185 aaPredicted RBP15.98■□□□□ 0.15
PTPA-223ENST00000452489 FOXL1Q12952 345 aa15.98■□□□□ 0.15
PTPA-223ENST00000452489 PDCD1Q15116 288 aa15.98■□□□□ 0.15
PTPA-223ENST00000452489 HAPLN4Q86UW8 402 aa15.98■□□□□ 0.15
PTPA-223ENST00000452489 SLC39A11Q8N1S5 342 aa15.98■□□□□ 0.15
PTPA-223ENST00000452489 ZNF114Q8NC26 417 aa15.98■□□□□ 0.15
PTPA-223ENST00000452489 MRPL18Q9H0U6 180 aaKnown RBP15.98■□□□□ 0.15
PTPA-223ENST00000452489 ZNF430Q9H8G1 570 aaPredicted RBP15.98■□□□□ 0.15
PTPA-223ENST00000452489 ODAMA1E959 279 aa15.97■□□□□ 0.15
PTPA-223ENST00000452489 PAGE4O60829 102 aa15.97■□□□□ 0.15
PTPA-223ENST00000452489 OPN1LWP04000 364 aa15.97■□□□□ 0.15
PTPA-223ENST00000452489 PPP1CAP62136 330 aa15.97■□□□□ 0.15
PTPA-223ENST00000452489 RPS18P62269 152 aaKnown RBP15.97■□□□□ 0.15
PTPA-223ENST00000452489 SERF2P84101 59 aa15.97■□□□□ 0.15
PTPA-223ENST00000452489 ACSF3Q4G176 576 aaPredicted RBP15.97■□□□□ 0.15
PTPA-223ENST00000452489 WFDC8Q8IUA0 241 aa15.97■□□□□ 0.15
PTPA-223ENST00000452489 OR10V1Q8NGI7 309 aa15.97■□□□□ 0.15
PTPA-223ENST00000452489 NRN1Q9NPD7 142 aa15.97■□□□□ 0.15
PTPA-223ENST00000452489 MRPS16Q9Y3D3 137 aaKnown RBP15.97■□□□□ 0.15
PTPA-223ENST00000452489 FRMD6-AS1P0C7T7 363 aa15.97■□□□□ 0.15
PTPA-223ENST00000452489 IAPPP10997 89 aa15.97■□□□□ 0.15
PTPA-223ENST00000452489 VDAC1P21796 283 aa15.97■□□□□ 0.15
PTPA-223ENST00000452489 RHOGP84095 191 aa15.97■□□□□ 0.15
PTPA-223ENST00000452489 PSG4Q00888 419 aa15.97■□□□□ 0.15
PTPA-223ENST00000452489 MFAP5Q13361 173 aa15.97■□□□□ 0.15
PTPA-223ENST00000452489 LRRC75BQ2VPJ9 315 aa15.97■□□□□ 0.15
PTPA-223ENST00000452489 DERL1Q9BUN8 251 aa15.97■□□□□ 0.15
PTPA-223ENST00000452489 IGHV1-69-2A0A0G2JMI3 117 aa15.96■□□□□ 0.15
PTPA-223ENST00000452489 IGLC7A0M8Q6 106 aa15.96■□□□□ 0.15
PTPA-223ENST00000452489 HYAL1Q12794 435 aa15.96■□□□□ 0.15
PTPA-223ENST00000452489 SYT13Q7L8C5 426 aa15.96■□□□□ 0.15
PTPA-223ENST00000452489 BAHD1Q8TBE0 780 aaPredicted RBP15.96■□□□□ 0.15
PTPA-223ENST00000452489 FGF14Q92915 247 aa15.96■□□□□ 0.15
PTPA-223ENST00000452489 NEIL1Q96FI4 390 aaPredicted RBP15.96■□□□□ 0.15
PTPA-223ENST00000452489 B4DGG1 531 aa15.96■□□□□ 0.14
PTPA-223ENST00000452489 DAP3P51398 398 aaKnown RBP15.96■□□□□ 0.14
PTPA-223ENST00000452489 SNAI3Q3KNW1 292 aa15.96■□□□□ 0.14
PTPA-223ENST00000452489 ZNF818PQ6ZRF7 136 aa15.96■□□□□ 0.14
PTPA-223ENST00000452489 SLC7A10Q9NS82 523 aa15.96■□□□□ 0.14
PTPA-223ENST00000452489 PTRH2Q9Y3E5 179 aaKnown RBP15.96■□□□□ 0.14
PTPA-223ENST00000452489 IGHV2-26A0A0B4J1V2 119 aa15.95■□□□□ 0.14
PTPA-223ENST00000452489 RBFOX2O43251 390 aaKnown RBP eCLIP15.95■□□□□ 0.141e-5■■■■□ 19.7
PTPA-223ENST00000452489 NBEAP1P0C6P0 100 aa15.95■□□□□ 0.14
PTPA-223ENST00000452489 PMCHP20382 165 aa15.95■□□□□ 0.14
PTPA-223ENST00000452489 IL12BP29460 328 aa15.95■□□□□ 0.14
PTPA-223ENST00000452489 OR4A47Q6IF82 309 aa15.95■□□□□ 0.14
PTPA-223ENST00000452489 PRR27Q6MZM9 219 aa15.95■□□□□ 0.14
PTPA-223ENST00000452489 C17orf99Q6UX52 265 aa15.95■□□□□ 0.14
PTPA-223ENST00000452489 LRFN3Q9BTN0 628 aa15.95■□□□□ 0.14
PTPA-223ENST00000452489 MEGF9Q9H1U4 602 aa15.95■□□□□ 0.14
PTPA-223ENST00000452489 ADAMTS9Q9P2N4 1935 aa15.95■□□□□ 0.14
PTPA-223ENST00000452489 CRYAAP02489 173 aa15.95■□□□□ 0.14
PTPA-223ENST00000452489 AMTP48728 403 aa15.95■□□□□ 0.14
PTPA-223ENST00000452489 EIF3IQ13347 325 aaKnown RBP15.95■□□□□ 0.14
PTPA-223ENST00000452489 MRPL49Q13405 166 aaKnown RBP15.95■□□□□ 0.14
PTPA-223ENST00000452489 PIGYQ3MUY2 71 aa15.95■□□□□ 0.14
PTPA-223ENST00000452489 S100A7AQ86SG5 101 aa15.95■□□□□ 0.14
PTPA-223ENST00000452489 GAPTQ8N292 157 aa15.95■□□□□ 0.14
PTPA-223ENST00000452489 ZIC4Q8N9L1 334 aa15.95■□□□□ 0.14
PTPA-223ENST00000452489 ABHD3Q8WU67 409 aa15.95■□□□□ 0.14
PTPA-223ENST00000452489 PINX1Q96BK5 328 aaKnown RBP15.95■□□□□ 0.14
PTPA-223ENST00000452489 WDR61Q9GZS3 305 aaKnown RBP15.95■□□□□ 0.14
PTPA-223ENST00000452489 UBE2L5PA0A1B0GUS4 154 aa15.94■□□□□ 0.14
PTPA-223ENST00000452489 ZNF253O75346 499 aa15.94■□□□□ 0.14
PTPA-223ENST00000452489 NRASP01111 189 aa15.94■□□□□ 0.14
PTPA-223ENST00000452489 KRASP01116 189 aa15.94■□□□□ 0.14
PTPA-223ENST00000452489 PLPPR5Q32ZL2 321 aa15.94■□□□□ 0.14
PTPA-223ENST00000452489 ACSM6Q6P461 480 aa15.94■□□□□ 0.14
PTPA-223ENST00000452489 ST6GALNAC3Q8NDV1 305 aa15.94■□□□□ 0.14
PTPA-223ENST00000452489 OR56B2PQ8NGI1 322 aa15.94■□□□□ 0.14
PTPA-223ENST00000452489 OR4C12Q96R67 309 aa15.94■□□□□ 0.14
PTPA-223ENST00000452489 TP73-AS1Q9UF72 201 aa15.94■□□□□ 0.14
PTPA-223ENST00000452489 ZNF891A8MT65 544 aaPredicted RBP15.94■□□□□ 0.14
PTPA-223ENST00000452489 RNF212BA8MTL3 300 aa15.94■□□□□ 0.14
PTPA-223ENST00000452489 NPIPA2E9PIF3 369 aa15.94■□□□□ 0.14
PTPA-223ENST00000452489 DEFA4P12838 97 aa15.94■□□□□ 0.14
PTPA-223ENST00000452489 WASP42768 502 aa15.94■□□□□ 0.14
PTPA-223ENST00000452489 KLHDC1Q8N7A1 406 aa15.94■□□□□ 0.14
PTPA-223ENST00000452489 FAM131CQ96AQ9 280 aa15.94■□□□□ 0.14
PTPA-223ENST00000452489 SMIM12Q96EX1 92 aa15.94■□□□□ 0.14
PTPA-223ENST00000452489 GNB4Q9HAV0 340 aa15.94■□□□□ 0.14
PTPA-223ENST00000452489 PNRC2Q9NPJ4 139 aaKnown RBP15.94■□□□□ 0.14
PTPA-223ENST00000452489 OTOL1A6NHN0 477 aaPredicted RBP15.93■□□□□ 0.14
PTPA-223ENST00000452489 FAM166BA8MTA8 275 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms