RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 P2RY1P47900 373 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 RAB7AP51149 207 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 RND2P52198 227 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 POLR2HP52434 150 aaKnown RBP3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 PFN3P60673 137 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 UBE2NP61088 152 aaKnown RBP3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 BTN3A2P78410 334 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 TGM3Q08188 693 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 ENPP2Q13822 863 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 ARL6IP1Q15041 203 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 TGIF1Q15583 401 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 ECSCRQ19T08 205 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 MAJINQ3KP22 176 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 C14orf177Q52M58 125 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 C10orf120Q5SQS8 335 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 RPL7L1Q6DKI1 246 aaKnown RBP3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 RTL6Q6ICC9 239 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 OR8G2PQ6IF36 304 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 FBXL22Q6P050 247 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 LEG1Q6P5S2 330 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 DEGS2Q6QHC5 323 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 UNQ9370/PRO34162Q6UXP9 181 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 ZNF497Q6ZNH5 498 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 TMPPEQ6ZT21 453 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 SCD5Q86SK9 330 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 PRSS58Q8IYP2 241 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 ZNF664Q8N3J9 261 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 C11orf42Q8N5U0 333 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 GVQW1Q8N7I0 195 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 ZNF676Q8N7Q3 588 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 ZNF321PQ8N8H1 164 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 CYB561A3Q8NBI2 242 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 ZNF738Q8NE65 137 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 OR9A1PQ8NGU1 263 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 RPS4Y2Q8TD47 263 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 RAB8BQ92930 207 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 NEIL2Q969S2 332 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 TMEM106AQ96A25 262 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 MRPL24Q96A35 216 aaKnown RBP3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 TMEM186Q96B77 213 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 FAM3DQ96BQ1 224 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 NTNG2Q96CW9 530 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 SEH1LQ96EE3 360 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 SEC22AQ96IW7 307 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 SLC35E1Q96K37 410 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 YPEL4Q96NS1 127 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 IP6K3Q96PC2 410 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 MCHR1Q99705 422 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 SLC6A7Q99884 636 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 CABLES2Q9BTV7 478 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 HCAR1Q9BXC0 346 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 KRTAP2-2Q9BYT5 123 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 TBL1XR1Q9BZK7 514 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 OR2J1Q9GZK6 312 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 PCBD2Q9H0N5 130 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 ATG10Q9H0Y0 220 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 CYTL1Q9NRR1 136 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 FKBP11Q9NYL4 201 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 THAP10Q9P2Z0 257 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 CHRNA9Q9UGM1 479 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 IL20RAQ9UHF4 553 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 ZNF230Q9UIE0 474 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 NAGKQ9UJ70 344 aa3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 ZNF443Q9Y2A4 671 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P16-201ENST00000447155 COL4A2P08572 1712 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 BPTFQ12830 3046 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 IGLV3-16A0A075B6K0 115 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 A0A0U1RQV5 110 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 RBFOX3A6NFN3 312 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 OR2AG2A6NM03 316 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 ZNF705FA8MVS1 300 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 GEMIN2O14893 280 aaKnown RBP3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 HMGB3O15347 200 aaKnown RBP3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 SOX15O60248 233 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 MMP23AO75900 390 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 NDUFB2O95178 105 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 SFT2D2O95562 160 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 IGLV3-27P01718 113 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 CXCL10P02778 98 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 MAS1P04201 325 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 KLK1P06870 262 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 DBIP07108 87 aaKnown RBP3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 ZNF705DP0CH99 300 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 ZNF705BP0CI00 300 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 OR13C7P0DN81 318 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 LIPCP11150 499 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 ATP1B2P14415 290 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 AKR1C4P17516 323 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 SERPINA2P20848 420 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 BRS3P32247 399 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 ARR3P36575 388 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 NAA10P41227 235 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 SGSHP51688 502 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 NCBP2P52298 156 aaKnown RBP eCLIP3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 HMGCS2P54868 508 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 TPPP2P59282 170 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 RPL27P61353 136 aaKnown RBP3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 RBX1P62877 108 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 SRPXP78539 464 aa3.59□□□□□ -1.83
HMGB1P16-201ENST00000447155 HLA-DRB3P79483 266 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms