RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 FBXO9Q9UK97 447 aaPredicted RBP12.65□□□□□ -0.39
ACTB-204ENST00000425660 ARFGEF3Q5TH69 2177 aa12.64□□□□□ -0.39
ACTB-204ENST00000425660 PPIAL4EA0A075B759 164 aa12.64□□□□□ -0.39
ACTB-204ENST00000425660 A0A1B0GW55 424 aa12.64□□□□□ -0.39
ACTB-204ENST00000425660 C5orf51A6NDU8 294 aa12.64□□□□□ -0.39
ACTB-204ENST00000425660 MPTX1A8MV57 137 aa12.64□□□□□ -0.39
ACTB-204ENST00000425660 PPIAL4DF5H284 164 aa12.64□□□□□ -0.39
ACTB-204ENST00000425660 TNFRSF13BO14836 293 aaPredicted RBP12.64□□□□□ -0.39
ACTB-204ENST00000425660 SPINT2O43291 252 aa12.64□□□□□ -0.39
ACTB-204ENST00000425660 PGLYRP1O75594 196 aaPredicted RBP12.64□□□□□ -0.39
ACTB-204ENST00000425660 GYPAP02724 150 aa12.64□□□□□ -0.39
ACTB-204ENST00000425660 DUX4L2P0CJ85 424 aa12.64□□□□□ -0.39
ACTB-204ENST00000425660 DUX4L3P0CJ86 424 aa12.64□□□□□ -0.39
ACTB-204ENST00000425660 DUX4L4P0CJ87 422 aa12.64□□□□□ -0.39
ACTB-204ENST00000425660 DUX4L5P0CJ88 424 aa12.64□□□□□ -0.39
ACTB-204ENST00000425660 DUX4L6P0CJ89 424 aa12.64□□□□□ -0.39
ACTB-204ENST00000425660 DUX4L7P0CJ90 424 aa12.64□□□□□ -0.39
ACTB-204ENST00000425660 PPIAL4FP0DN26 164 aa12.64□□□□□ -0.39
ACTB-204ENST00000425660 CGB3P0DN86 165 aa12.64□□□□□ -0.39
ACTB-204ENST00000425660 CGB7P0DN87 165 aa12.64□□□□□ -0.39
ACTB-204ENST00000425660 SELLP14151 372 aa12.64□□□□□ -0.39
ACTB-204ENST00000425660 IGFBP2P18065 325 aa12.64□□□□□ -0.39
ACTB-204ENST00000425660 SRPXP78539 464 aa12.64□□□□□ -0.39
ACTB-204ENST00000425660 IL15RAQ13261 267 aa12.64□□□□□ -0.39
ACTB-204ENST00000425660 SP6Q3SY56 376 aa12.64□□□□□ -0.39
ACTB-204ENST00000425660 TMEM65Q6PI78 240 aa12.64□□□□□ -0.39
ACTB-204ENST00000425660 DUX4L9Q6RFH8 374 aaPredicted RBP12.64□□□□□ -0.39
ACTB-204ENST00000425660 DEFB108BQ8NET1 73 aa12.64□□□□□ -0.39
ACTB-204ENST00000425660 ARL11Q969Q4 196 aa12.64□□□□□ -0.39
ACTB-204ENST00000425660 C14orf79Q96F83 325 aa12.64□□□□□ -0.39
ACTB-204ENST00000425660 PARP12Q9H0J9 701 aaKnown RBP12.64□□□□□ -0.39
ACTB-204ENST00000425660 SLA2Q9H6Q3 261 aa12.64□□□□□ -0.39
ACTB-204ENST00000425660 DUX4Q9UBX2 424 aa12.64□□□□□ -0.39
ACTB-204ENST00000425660 PPIAL4AQ9Y536 164 aa12.64□□□□□ -0.39
ACTB-204ENST00000425660 DSCAMO60469 2012 aa12.64□□□□□ -0.39
ACTB-204ENST00000425660 IGHV1-69-2A0A0G2JMI3 117 aa12.63□□□□□ -0.39
ACTB-204ENST00000425660 C13orf42A0A1B0GVH6 325 aa12.63□□□□□ -0.39
ACTB-204ENST00000425660 HSD17B6O14756 317 aa12.63□□□□□ -0.39
ACTB-204ENST00000425660 PHF1O43189 567 aaPredicted RBP12.63□□□□□ -0.39
ACTB-204ENST00000425660 B3GALNT1O75752 331 aa12.63□□□□□ -0.39
ACTB-204ENST00000425660 FSTL3O95633 263 aa12.63□□□□□ -0.39
ACTB-204ENST00000425660 SLC25A4P12235 298 aa12.63□□□□□ -0.39
ACTB-204ENST00000425660 LGI3Q8N145 548 aa12.63□□□□□ -0.39
ACTB-204ENST00000425660 FAM216AQ8WUB2 273 aa12.63□□□□□ -0.39
ACTB-204ENST00000425660 C18orf12Q96KH6 178 aa12.63□□□□□ -0.39
ACTB-204ENST00000425660 OR10C1Q96KK4 312 aa12.63□□□□□ -0.39
ACTB-204ENST00000425660 TMEM56Q96MV1 263 aa12.63□□□□□ -0.39
ACTB-204ENST00000425660 CCL13Q99616 98 aa12.63□□□□□ -0.39
ACTB-204ENST00000425660 METTL8Q9H825 291 aaKnown RBP12.63□□□□□ -0.39
ACTB-204ENST00000425660 COMMD9Q9P000 198 aa12.63□□□□□ -0.39
ACTB-204ENST00000425660 TMEM56-RWDD3S4R434 201 aa12.63□□□□□ -0.39
ACTB-204ENST00000425660 HOXB5P09067 269 aa12.62□□□□□ -0.39
ACTB-204ENST00000425660 F2RP25116 425 aa12.62□□□□□ -0.39
ACTB-204ENST00000425660 UCP1P25874 307 aa12.62□□□□□ -0.39
ACTB-204ENST00000425660 S100GP29377 79 aa12.62□□□□□ -0.39
ACTB-204ENST00000425660 EDDM3BP56851 147 aa12.62□□□□□ -0.39
ACTB-204ENST00000425660 MSMO1Q15800 293 aa12.62□□□□□ -0.39
ACTB-204ENST00000425660 C11orf87Q6NUJ2 197 aa12.62□□□□□ -0.39
ACTB-204ENST00000425660 FAM216BQ8N7L0 139 aa12.62□□□□□ -0.39
ACTB-204ENST00000425660 C2orf50Q96LR7 162 aa12.62□□□□□ -0.39
ACTB-204ENST00000425660 DCTN5Q9BTE1 182 aa12.62□□□□□ -0.39
ACTB-204ENST00000425660 OR2S2Q9NQN1 319 aa12.62□□□□□ -0.39
ACTB-204ENST00000425660 SPTBN1Q01082 2364 aaKnown RBP12.62□□□□□ -0.39
ACTB-204ENST00000425660 NKX6-3A6NJ46 265 aa12.62□□□□□ -0.39
ACTB-204ENST00000425660 H0Y980 276 aa12.62□□□□□ -0.39
ACTB-204ENST00000425660 F2RL2O00254 374 aa12.62□□□□□ -0.39
ACTB-204ENST00000425660 TMPRSS2O15393 492 aa12.62□□□□□ -0.39
ACTB-204ENST00000425660 MPC2O95563 127 aa12.62□□□□□ -0.39
ACTB-204ENST00000425660 CDS2O95674 445 aa12.62□□□□□ -0.39
ACTB-204ENST00000425660 OR8U9P0C7N5 309 aa12.62□□□□□ -0.39
ACTB-204ENST00000425660 RPA2P15927 270 aa12.62□□□□□ -0.39
ACTB-204ENST00000425660 CXCL2P19875 107 aa12.62□□□□□ -0.39
ACTB-204ENST00000425660 PSMB6P28072 239 aa12.62□□□□□ -0.39
ACTB-204ENST00000425660 C11orf71Q6IPW1 123 aa12.62□□□□□ -0.39
ACTB-204ENST00000425660 OR52L2PQ8NGH6 319 aa12.62□□□□□ -0.39
ACTB-204ENST00000425660 OR8U1Q8NH10 309 aa12.62□□□□□ -0.39
ACTB-204ENST00000425660 LHFPL5Q8TAF8 219 aa12.62□□□□□ -0.39
ACTB-204ENST00000425660 NINJ1Q92982 152 aa12.62□□□□□ -0.39
ACTB-204ENST00000425660 LINC00574Q9H8X3 128 aa12.62□□□□□ -0.39
ACTB-204ENST00000425660 CBLN4Q9NTU7 201 aa12.62□□□□□ -0.39
ACTB-204ENST00000425660 KAAG1Q9UBP8 84 aa12.62□□□□□ -0.39
ACTB-204ENST00000425660 JPT1Q9UK76 154 aa12.62□□□□□ -0.39
ACTB-204ENST00000425660 ZNF462Q96JM2 2506 aa12.62□□□□□ -0.39
ACTB-204ENST00000425660 TANC2Q9HCD6 1990 aa12.61□□□□□ -0.39
ACTB-204ENST00000425660 HRNRQ86YZ3 2850 aaPredicted RBP12.61□□□□□ -0.39
ACTB-204ENST00000425660 ABCA4P78363 2273 aa12.61□□□□□ -0.39
ACTB-204ENST00000425660 FXYD6-FXYD2A0A087WZ82 144 aa12.61□□□□□ -0.39
ACTB-204ENST00000425660 B8ZZF3 427 aa12.61□□□□□ -0.39
ACTB-204ENST00000425660 ARPC5O15511 151 aa12.61□□□□□ -0.39
ACTB-204ENST00000425660 IFNA21P01568 189 aa12.61□□□□□ -0.39
ACTB-204ENST00000425660 GNMTQ14749 295 aa12.61□□□□□ -0.39
ACTB-204ENST00000425660 GGNBP1Q5YKI7 109 aa12.61□□□□□ -0.39
ACTB-204ENST00000425660 ZNF645Q8N7E2 425 aa12.61□□□□□ -0.39
ACTB-204ENST00000425660 ZBTB34Q8NCN2 500 aa12.61□□□□□ -0.39
ACTB-204ENST00000425660 CORO2AQ92828 525 aa12.61□□□□□ -0.39
ACTB-204ENST00000425660 HEXA-AS1Q9H8Q6 139 aa12.61□□□□□ -0.39
ACTB-204ENST00000425660 PAIP2BQ9ULR5 123 aaKnown RBP12.61□□□□□ -0.39
ACTB-204ENST00000425660 TMED3Q9Y3Q3 217 aa12.61□□□□□ -0.39
ACTB-204ENST00000425660 DANCRP0C864 163 aa12.6□□□□□ -0.39
ACTB-204ENST00000425660 LOXL3P58215 753 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms