RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 SYNGR1O43759 233 aa6.4□□□□□ -1.38
SH3D19-203ENST00000409598 MYOD1P15172 320 aa6.4□□□□□ -1.38
SH3D19-203ENST00000409598 IL11P20809 199 aa6.4□□□□□ -1.38
SH3D19-203ENST00000409598 NPY1RP25929 384 aa6.4□□□□□ -1.38
SH3D19-203ENST00000409598 PPP1CCP36873 323 aaKnown RBP6.4□□□□□ -1.38
SH3D19-203ENST00000409598 MAGEB1P43366 347 aa6.4□□□□□ -1.38
SH3D19-203ENST00000409598 TMEM155Q4W5P6 130 aa6.4□□□□□ -1.38
SH3D19-203ENST00000409598 GGNBP1Q5YKI7 109 aa6.4□□□□□ -1.38
SH3D19-203ENST00000409598 RHOUQ7L0Q8 258 aa6.4□□□□□ -1.38
SH3D19-203ENST00000409598 RFLNBQ8N5W9 214 aa6.4□□□□□ -1.38
SH3D19-203ENST00000409598 BBS1Q8NFJ9 593 aa6.4□□□□□ -1.38
SH3D19-203ENST00000409598 OR13A1Q8NGR1 328 aa6.4□□□□□ -1.38
SH3D19-203ENST00000409598 UBALD1Q8TB05 177 aa6.4□□□□□ -1.38
SH3D19-203ENST00000409598 MARVELD1Q9BSK0 173 aa6.4□□□□□ -1.38
SH3D19-203ENST00000409598 BPESC1Q9GZL8 116 aa6.4□□□□□ -1.38
SH3D19-203ENST00000409598 FGF20Q9NP95 211 aaPredicted RBP6.4□□□□□ -1.38
SH3D19-203ENST00000409598 ZNF107Q9UII5 783 aaPredicted RBP6.4□□□□□ -1.38
SH3D19-203ENST00000409598 PI4KAP42356 2102 aa6.4□□□□□ -1.38
SH3D19-203ENST00000409598 ZNF98A6NK75 572 aa6.4□□□□□ -1.38
SH3D19-203ENST00000409598 FBXO24O75426 580 aa6.4□□□□□ -1.38
SH3D19-203ENST00000409598 IGHV3-13P01766 116 aa6.4□□□□□ -1.38
SH3D19-203ENST00000409598 IGHV3-7P01780 117 aa6.4□□□□□ -1.38
SH3D19-203ENST00000409598 SULT1A3P0DMM9 295 aa6.4□□□□□ -1.38
SH3D19-203ENST00000409598 SULT1A4P0DMN0 295 aa6.4□□□□□ -1.38
SH3D19-203ENST00000409598 NQO2P16083 231 aa6.4□□□□□ -1.38
SH3D19-203ENST00000409598 CRYBB2P43320 205 aa6.4□□□□□ -1.38
SH3D19-203ENST00000409598 LPAR6P43657 344 aa6.4□□□□□ -1.38
SH3D19-203ENST00000409598 DAZAP2Q15038 168 aaPredicted RBP6.4□□□□□ -1.38
SH3D19-203ENST00000409598 SAXO1Q8IYX7 474 aa6.4□□□□□ -1.38
SH3D19-203ENST00000409598 SUMF2Q8NBJ7 301 aa6.4□□□□□ -1.38
SH3D19-203ENST00000409598 TMEM104Q8NE00 496 aa6.4□□□□□ -1.38
SH3D19-203ENST00000409598 LILRB1Q8NHL6 650 aaPredicted RBP6.4□□□□□ -1.38
SH3D19-203ENST00000409598 CHAC2Q8WUX2 184 aa6.4□□□□□ -1.38
SH3D19-203ENST00000409598 RNF166Q96A37 237 aaPredicted RBP6.4□□□□□ -1.38
SH3D19-203ENST00000409598 ZMAT4Q9H898 229 aa6.4□□□□□ -1.38
SH3D19-203ENST00000409598 PATZ1Q9HBE1 687 aaKnown RBP6.4□□□□□ -1.38
SH3D19-203ENST00000409598 TNFSF12O43508 249 aa6.4□□□□□ -1.39
SH3D19-203ENST00000409598 REG1BP48304 166 aa6.4□□□□□ -1.39
SH3D19-203ENST00000409598 HMGN3Q15651 99 aa6.4□□□□□ -1.39
SH3D19-203ENST00000409598 C2orf76Q3KRA6 126 aa6.4□□□□□ -1.39
SH3D19-203ENST00000409598 ZNF826PQ6ZT77 177 aa6.4□□□□□ -1.39
SH3D19-203ENST00000409598 ZNF525Q8N782 197 aa6.4□□□□□ -1.39
SH3D19-203ENST00000409598 OR5B12Q96R08 314 aa6.4□□□□□ -1.39
SH3D19-203ENST00000409598 TAS2R5Q9NYW4 299 aa6.4□□□□□ -1.39
SH3D19-203ENST00000409598 CCL27Q9Y4X3 112 aa6.4□□□□□ -1.39
SH3D19-203ENST00000409598 CSAG2Q9Y5P2 127 aa6.4□□□□□ -1.39
SH3D19-203ENST00000409598 SLC25A15Q9Y619 301 aa6.4□□□□□ -1.39
SH3D19-203ENST00000409598 PSMB11A5LHX3 300 aa6.4□□□□□ -1.39
SH3D19-203ENST00000409598 C2orf68Q2NKX9 166 aa6.4□□□□□ -1.39
SH3D19-203ENST00000409598 SMIM3Q9BZL3 60 aa6.4□□□□□ -1.39
SH3D19-203ENST00000409598 ZNF705FA8MVS1 300 aaPredicted RBP6.39□□□□□ -1.39
SH3D19-203ENST00000409598 OOSP1A8MZH6 123 aa6.39□□□□□ -1.39
SH3D19-203ENST00000409598 ZNF705DP0CH99 300 aaPredicted RBP6.39□□□□□ -1.39
SH3D19-203ENST00000409598 ZNF705BP0CI00 300 aaPredicted RBP6.39□□□□□ -1.39
SH3D19-203ENST00000409598 HLA-DRB3P79483 266 aa6.39□□□□□ -1.39
SH3D19-203ENST00000409598 ZNF266Q14584 549 aa6.39□□□□□ -1.39
SH3D19-203ENST00000409598 OR52I2Q8NH67 350 aa6.39□□□□□ -1.39
SH3D19-203ENST00000409598 KPTNQ9Y664 436 aa6.39□□□□□ -1.39
SH3D19-203ENST00000409598 TICRRQ7Z2Z1 1910 aa6.39□□□□□ -1.39
SH3D19-203ENST00000409598 C4orf51C9J302 202 aa6.39□□□□□ -1.39
SH3D19-203ENST00000409598 NPIPB11E5RHQ5 1161 aa6.39□□□□□ -1.39
SH3D19-203ENST00000409598 ST8SIA3O43173 380 aa6.39□□□□□ -1.39
SH3D19-203ENST00000409598 OR2B8PP59922 312 aa6.39□□□□□ -1.39
SH3D19-203ENST00000409598 SNRPD3P62318 126 aaKnown RBP6.39□□□□□ -1.39
SH3D19-203ENST00000409598 SMAGPQ0VAQ4 97 aa6.39□□□□□ -1.39
SH3D19-203ENST00000409598 KIAA0141Q14154 515 aaPredicted RBP6.39□□□□□ -1.39
SH3D19-203ENST00000409598 LRRC75A-AS1Q8N1F1 130 aa6.39□□□□□ -1.39
SH3D19-203ENST00000409598 OR4A4PQ8NGN8 299 aa6.39□□□□□ -1.39
SH3D19-203ENST00000409598 OR1L4Q8NGR5 311 aa6.39□□□□□ -1.39
SH3D19-203ENST00000409598 CXorf58Q96LI9 332 aa6.39□□□□□ -1.39
SH3D19-203ENST00000409598 CHST2Q9Y4C5 530 aa6.39□□□□□ -1.39
SH3D19-203ENST00000409598 ICE1Q9Y2F5 2266 aa6.39□□□□□ -1.39
SH3D19-203ENST00000409598 FAM90A10PA6NDY2 464 aa6.39□□□□□ -1.39
SH3D19-203ENST00000409598 FAM90A18PA6NE21 464 aa6.39□□□□□ -1.39
SH3D19-203ENST00000409598 FAM90A16PA6NEW6 464 aa6.39□□□□□ -1.39
SH3D19-203ENST00000409598 FAM90A20PA6NIJ5 464 aa6.39□□□□□ -1.39
SH3D19-203ENST00000409598 FAM90A8PA6NJQ4 464 aa6.39□□□□□ -1.39
SH3D19-203ENST00000409598 FAM90A7PA6NKC0 464 aa6.39□□□□□ -1.39
SH3D19-203ENST00000409598 FAM90A22PA8MWA6 464 aa6.39□□□□□ -1.39
SH3D19-203ENST00000409598 FAM90A12PA8MX19 464 aa6.39□□□□□ -1.39
SH3D19-203ENST00000409598 FAM90A5PA8MXJ8 464 aa6.39□□□□□ -1.39
SH3D19-203ENST00000409598 FAM90A23PA8MXZ1 464 aa6.39□□□□□ -1.39
SH3D19-203ENST00000409598 IQCF6A8MYZ5 107 aa6.39□□□□□ -1.39
SH3D19-203ENST00000409598 FAM90A15PP0C7V4 464 aa6.39□□□□□ -1.39
SH3D19-203ENST00000409598 FAM90A13PP0C7W8 464 aa6.39□□□□□ -1.39
SH3D19-203ENST00000409598 FAM90A14PP0C7W9 464 aa6.39□□□□□ -1.39
SH3D19-203ENST00000409598 FAM90A24PP0C7X0 464 aa6.39□□□□□ -1.39
SH3D19-203ENST00000409598 HMGA2P52926 109 aa6.39□□□□□ -1.39
SH3D19-203ENST00000409598 UBE2MP61081 183 aaKnown RBP6.39□□□□□ -1.39
SH3D19-203ENST00000409598 SNRPEP62304 92 aaKnown RBP6.39□□□□□ -1.39
SH3D19-203ENST00000409598 C12orf73Q69YU5 71 aa6.39□□□□□ -1.39
SH3D19-203ENST00000409598 OR8I2Q8N0Y5 310 aa6.39□□□□□ -1.39
SH3D19-203ENST00000409598 ITLN2Q8WWU7 325 aaPredicted RBP6.39□□□□□ -1.39
SH3D19-203ENST00000409598 PUS1Q9Y606 427 aaKnown RBP eCLIP6.39□□□□□ -1.39
SH3D19-203ENST00000409598 IGKV3-7A0A075B6H7 116 aa6.39□□□□□ -1.39
SH3D19-203ENST00000409598 TRAV30A0A087WSZ9 112 aa6.39□□□□□ -1.39
SH3D19-203ENST00000409598 TRBV5-3A0A0A0MS03 114 aa6.39□□□□□ -1.39
SH3D19-203ENST00000409598 FAM181BA6NEQ2 426 aa6.39□□□□□ -1.39
SH3D19-203ENST00000409598 HELTA6NFD8 242 aa6.39□□□□□ -1.39
SH3D19-203ENST00000409598 RPL36A-HNRNPH2H7BZ11 118 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms