RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 PRSS22Q9GZN4 317 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 CLCF1Q9UBD9 225 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 PSME4Q14997 1843 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 BMPR1BO00238 502 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 SOX15O60248 233 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 PPYP01298 95 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 RAB5CP51148 216 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 PJVKQ0ZLH3 352 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 LINC00303Q3SY05 128 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 C12orf54Q6X4T0 127 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 ZNF66Q6ZN08 573 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 STPG3Q8N7X2 389 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 OR52B4Q8NGK2 314 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 OR5P3Q8WZ94 311 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 MRPL24Q96A35 216 aaKnown RBP4.31□□□□□ -1.72
SCN3A-203ENST00000409101 RBM14Q96PK6 669 aaKnown RBP4.31□□□□□ -1.72
SCN3A-203ENST00000409101 PEMTQ9UBM1 199 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 KLHDC2Q9Y2U9 406 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 SDK1Q7Z5N4 2213 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 TCRBV4S1A1TA0A5B7 111 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 C17orf100A8MU93 164 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 CORTO00230 105 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 THY1P04216 161 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 TGFBR1P36897 503 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 CA7P43166 264 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 ZNF137PP52743 207 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 EFNA4P52798 201 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 DGAT2L7PQ6IED9 249 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 GLDNQ6ZMI3 551 aaPredicted RBP4.31□□□□□ -1.72
SCN3A-203ENST00000409101 ZNF738Q8NE65 137 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 STXBP6Q8NFX7 210 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 DDB2Q92466 427 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 IL22RA2Q969J5 263 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 SAV1Q9H4B6 383 aaPredicted RBP4.31□□□□□ -1.72
SCN3A-203ENST00000409101 ST6GALNAC2Q9UJ37 374 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 ZNF727A8MUV8 499 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 NPIPB11E5RHQ5 1161 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 TRGV3P03979 118 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 FGF9P31371 208 aaPredicted RBP4.3□□□□□ -1.72
SCN3A-203ENST00000409101 MFAP4P55083 255 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 PAX5Q02548 391 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 FUT5Q11128 374 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 SURF2Q15527 256 aaPredicted RBP4.3□□□□□ -1.72
SCN3A-203ENST00000409101 KHDC3LQ587J8 217 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 FAM162BQ5T6X4 162 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 GVQW1Q8N7I0 195 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 SCARB1Q8WTV0 552 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 SLC25A28Q96A46 364 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 GPX7Q96SL4 187 aaPredicted RBP4.3□□□□□ -1.72
SCN3A-203ENST00000409101 JPT1Q9UK76 154 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 UFC1Q9Y3C8 167 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 PATJQ8NI35 1801 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 FAM90A10PA6NDY2 464 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 FAM90A18PA6NE21 464 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 FAM90A16PA6NEW6 464 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 FAM90A20PA6NIJ5 464 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 FAM90A8PA6NJQ4 464 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 FAM90A7PA6NKC0 464 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 FAM90A22PA8MWA6 464 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 KIAA1324LA8MWY0 1029 aaPredicted RBP4.3□□□□□ -1.72
SCN3A-203ENST00000409101 FAM90A12PA8MX19 464 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 FAM90A5PA8MXJ8 464 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 FAM90A23PA8MXZ1 464 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 PDGFAP04085 211 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 FAM90A15PP0C7V4 464 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 FAM90A13PP0C7W8 464 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 FAM90A14PP0C7W9 464 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 FAM90A24PP0C7X0 464 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 PSG2P11465 335 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 HIST1H1BP16401 226 aaKnown RBP4.3□□□□□ -1.72
SCN3A-203ENST00000409101 ERVFC1-1P60608 527 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 SMAGPQ0VAQ4 97 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 Q9N2K0 584 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 GAB2Q9UQC2 676 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 MYO18AQ92614 2054 aaKnown RBP4.3□□□□□ -1.72
SCN3A-203ENST00000409101 TRAV30A0A087WSZ9 112 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 OR4C45A6NMZ5 311 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 ZNF705GA8MUZ8 300 aaPredicted RBP4.3□□□□□ -1.72
SCN3A-203ENST00000409101 NEURL1O76050 574 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 SCGB1D1O95968 90 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 M6PRP20645 277 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 CDC34P49427 236 aaPredicted RBP4.3□□□□□ -1.72
SCN3A-203ENST00000409101 Q0VFX4 171 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 FXYD3Q14802 87 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 PGLYRP3Q96LB9 341 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 TMEM167BQ9NRX6 74 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 MTFP1Q9UDX5 166 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 LHFPL6Q9Y693 200 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 IGLV1-36A0A0B4J1U3 117 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 C9orf170A2RU37 121 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 PINLYPA6NC86 204 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 HLA-GP17693 338 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 GNG4P50150 75 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 RPL8P62917 257 aaKnown RBP4.3□□□□□ -1.72
SCN3A-203ENST00000409101 ENDOGQ14249 297 aaKnown RBP4.3□□□□□ -1.72
SCN3A-203ENST00000409101 NHLRC2Q8NBF2 726 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 SYT8Q8NBV8 401 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 MARC2Q969Z3 335 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 DPH3Q96FX2 82 aa4.3□□□□□ -1.72
SCN3A-203ENST00000409101 DEPPQ9NTK1 212 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms