RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 OR5T2Q8NGG2 359 aa12.62□□□□□ -0.39
SCAF11-204ENST00000395454 TOLLIPQ9H0E2 274 aa12.62□□□□□ -0.39
SCAF11-204ENST00000395454 UBQLN2Q9UHD9 624 aa12.62□□□□□ -0.39
SCAF11-204ENST00000395454 MAB21L2Q9Y586 359 aa12.62□□□□□ -0.39
SCAF11-204ENST00000395454 IGHV3-64DA0A0J9YX35 117 aa12.62□□□□□ -0.39
SCAF11-204ENST00000395454 TMEM30CPA0ZSE6 113 aa12.62□□□□□ -0.39
SCAF11-204ENST00000395454 H0YIZ8 118 aa12.62□□□□□ -0.39
SCAF11-204ENST00000395454 GPR31O00270 319 aa12.62□□□□□ -0.39
SCAF11-204ENST00000395454 LHBP01229 141 aa12.62□□□□□ -0.39
SCAF11-204ENST00000395454 IGHV1-46P01743 117 aa12.62□□□□□ -0.39
SCAF11-204ENST00000395454 CDKN1AP38936 164 aa12.62□□□□□ -0.39
SCAF11-204ENST00000395454 PHLDA2Q53GA4 152 aa12.62□□□□□ -0.39
SCAF11-204ENST00000395454 PRSS54Q6PEW0 395 aa12.62□□□□□ -0.39
SCAF11-204ENST00000395454 SLC51BQ86UW2 128 aa12.62□□□□□ -0.39
SCAF11-204ENST00000395454 OR11L1Q8NGX0 322 aa12.62□□□□□ -0.39
SCAF11-204ENST00000395454 OR10J5Q8NHC4 309 aa12.62□□□□□ -0.39
SCAF11-204ENST00000395454 MEGF10Q96KG7 1140 aa12.62□□□□□ -0.39
SCAF11-204ENST00000395454 METTL8Q9H825 291 aaKnown RBP12.62□□□□□ -0.39
SCAF11-204ENST00000395454 ZDHHC8Q9ULC8 765 aa12.62□□□□□ -0.39
SCAF11-204ENST00000395454 FLNBO75369 2602 aaKnown RBP12.62□□□□□ -0.39
SCAF11-204ENST00000395454 ADH4P08319 380 aa12.61□□□□□ -0.39
SCAF11-204ENST00000395454 OR3A1P47881 315 aa12.61□□□□□ -0.39
SCAF11-204ENST00000395454 CCL8P80075 99 aa12.61□□□□□ -0.39
SCAF11-204ENST00000395454 LRRC37A5PQ49AS3 106 aa12.61□□□□□ -0.39
SCAF11-204ENST00000395454 ESCO2Q56NI9 601 aa12.61□□□□□ -0.39
SCAF11-204ENST00000395454 CLLU1Q5K131 121 aa12.61□□□□□ -0.39
SCAF11-204ENST00000395454 GGNBP1Q5YKI7 109 aa12.61□□□□□ -0.39
SCAF11-204ENST00000395454 ZNF818PQ6ZRF7 136 aa12.61□□□□□ -0.39
SCAF11-204ENST00000395454 BVESQ8NE79 360 aa12.61□□□□□ -0.39
SCAF11-204ENST00000395454 LRRC29Q8WV35 223 aa12.61□□□□□ -0.39
SCAF11-204ENST00000395454 KIRREL1Q96J84 757 aa12.61□□□□□ -0.39
SCAF11-204ENST00000395454 TMEM56Q96MV1 263 aa12.61□□□□□ -0.39
SCAF11-204ENST00000395454 TMEM222Q9H0R3 208 aa12.61□□□□□ -0.39
SCAF11-204ENST00000395454 UFSP2Q9NUQ7 469 aa12.61□□□□□ -0.39
SCAF11-204ENST00000395454 AUP1Q9Y679 476 aa12.61□□□□□ -0.39
SCAF11-204ENST00000395454 TMEM56-RWDD3S4R434 201 aa12.61□□□□□ -0.39
SCAF11-204ENST00000395454 HEXAP06865 529 aa12.6□□□□□ -0.39
SCAF11-204ENST00000395454 HOXB5P09067 269 aa12.6□□□□□ -0.39
SCAF11-204ENST00000395454 PET100P0DJ07 73 aa12.6□□□□□ -0.39
SCAF11-204ENST00000395454 PPOXP50336 477 aa12.6□□□□□ -0.39
SCAF11-204ENST00000395454 ATXN7L3Q14CW9 347 aaPredicted RBP12.6□□□□□ -0.39
SCAF11-204ENST00000395454 LGI3Q8N145 548 aa12.6□□□□□ -0.39
SCAF11-204ENST00000395454 GCSAMQ8N6F7 178 aa12.6□□□□□ -0.39
SCAF11-204ENST00000395454 COQ2Q96H96 371 aa12.6□□□□□ -0.39
SCAF11-204ENST00000395454 OR2V2Q96R30 315 aa12.6□□□□□ -0.39
SCAF11-204ENST00000395454 FBXO9Q9UK97 447 aaPredicted RBP12.6□□□□□ -0.39
SCAF11-204ENST00000395454 MAP1AP78559 2803 aaPredicted RBP12.6□□□□□ -0.39
SCAF11-204ENST00000395454 ANKRD17O75179 2603 aaKnown RBP12.6□□□□□ -0.39
SCAF11-204ENST00000395454 ARID1AO14497 2285 aa12.6□□□□□ -0.39
SCAF11-204ENST00000395454 C3orf85A0A1B0GTC6 90 aa12.6□□□□□ -0.39
SCAF11-204ENST00000395454 LINC00862A6NCI5 91 aa12.6□□□□□ -0.39
SCAF11-204ENST00000395454 BCL2L11O43521 198 aa12.6□□□□□ -0.39
SCAF11-204ENST00000395454 ZNF737O75373 536 aa12.6□□□□□ -0.39
SCAF11-204ENST00000395454 IFNA21P01568 189 aa12.6□□□□□ -0.39
SCAF11-204ENST00000395454 TNFSF4P23510 183 aa12.6□□□□□ -0.39
SCAF11-204ENST00000395454 CEBPDP49716 269 aaPredicted RBP12.6□□□□□ -0.39
SCAF11-204ENST00000395454 TESK1Q15569 626 aa12.6□□□□□ -0.39
SCAF11-204ENST00000395454 ZNF565Q8N9K5 539 aa12.6□□□□□ -0.39
SCAF11-204ENST00000395454 TP53RKQ96S44 253 aa12.6□□□□□ -0.39
SCAF11-204ENST00000395454 GSX2Q9BZM3 304 aa12.6□□□□□ -0.39
SCAF11-204ENST00000395454 SLC5A7Q9GZV3 580 aa12.6□□□□□ -0.39
SCAF11-204ENST00000395454 SHARPINQ9H0F6 387 aa12.6□□□□□ -0.39
SCAF11-204ENST00000395454 DNAJB11Q9UBS4 358 aa12.6□□□□□ -0.39
SCAF11-204ENST00000395454 OR14J1Q9UGF5 321 aa12.6□□□□□ -0.39
SCAF11-204ENST00000395454 IL19Q9UHD0 177 aa12.6□□□□□ -0.39
SCAF11-204ENST00000395454 TRAPPC2LQ9UL33 140 aa12.6□□□□□ -0.39
SCAF11-204ENST00000395454 TMED3Q9Y3Q3 217 aa12.6□□□□□ -0.39
SCAF11-204ENST00000395454 DUXBA0A1W2PPF3 345 aa12.59□□□□□ -0.39
SCAF11-204ENST00000395454 EGR1P18146 543 aa12.59□□□□□ -0.39
SCAF11-204ENST00000395454 UCP1P25874 307 aa12.59□□□□□ -0.39
SCAF11-204ENST00000395454 TNFAIP6P98066 277 aaPredicted RBP12.59□□□□□ -0.39
SCAF11-204ENST00000395454 IAH1Q2TAA2 248 aaPredicted RBP12.59□□□□□ -0.39
SCAF11-204ENST00000395454 SP6Q3SY56 376 aa12.59□□□□□ -0.39
SCAF11-204ENST00000395454 TBC1D26Q86UD7 250 aa12.59□□□□□ -0.39
SCAF11-204ENST00000395454 CD177Q8N6Q3 437 aa12.59□□□□□ -0.39
SCAF11-204ENST00000395454 LHFPL5Q8TAF8 219 aa12.59□□□□□ -0.39
SCAF11-204ENST00000395454 Q8TCH9 128 aa12.59□□□□□ -0.39
SCAF11-204ENST00000395454 SECTM1Q8WVN6 248 aa12.59□□□□□ -0.39
SCAF11-204ENST00000395454 ERGIC1Q969X5 290 aa12.59□□□□□ -0.39
SCAF11-204ENST00000395454 AQP10Q96PS8 301 aa12.59□□□□□ -0.39
SCAF11-204ENST00000395454 DIRC2Q96SL1 478 aa12.59□□□□□ -0.39
SCAF11-204ENST00000395454 RAB1BQ9H0U4 201 aa12.59□□□□□ -0.39
SCAF11-204ENST00000395454 SAP30LQ9HAJ7 183 aa12.59□□□□□ -0.39
SCAF11-204ENST00000395454 TAF9BQ9HBM6 251 aa12.59□□□□□ -0.39
SCAF11-204ENST00000395454 KIAA2026Q5HYC2 2103 aa12.59□□□□□ -0.39
SCAF11-204ENST00000395454 hCG_1807616A0A1W2PRN6 198 aa12.58□□□□□ -0.39
SCAF11-204ENST00000395454 RAB32Q13637 225 aa12.58□□□□□ -0.39
SCAF11-204ENST00000395454 FAM209AQ5JX71 171 aa12.58□□□□□ -0.39
SCAF11-204ENST00000395454 CMTM1Q8IZ96 169 aa12.58□□□□□ -0.39
SCAF11-204ENST00000395454 INO80EQ8NBZ0 244 aaPredicted RBP12.58□□□□□ -0.39
SCAF11-204ENST00000395454 IL22RA2Q969J5 263 aa12.58□□□□□ -0.39
SCAF11-204ENST00000395454 RRNAD1Q96FB5 475 aaKnown RBP12.58□□□□□ -0.39
SCAF11-204ENST00000395454 NAV2Q8IVL1 2488 aa12.58□□□□□ -0.4
SCAF11-204ENST00000395454 IGKV1D-17A0A075B6S4 117 aa12.58□□□□□ -0.4
SCAF11-204ENST00000395454 OOEPA6NGQ2 149 aa12.58□□□□□ -0.4
SCAF11-204ENST00000395454 H0Y980 276 aa12.58□□□□□ -0.4
SCAF11-204ENST00000395454 PHF1O43189 567 aaPredicted RBP12.58□□□□□ -0.4
SCAF11-204ENST00000395454 CDS2O95674 445 aa12.58□□□□□ -0.4
SCAF11-204ENST00000395454 IGLV2-14P01704 120 aa12.58□□□□□ -0.4
SCAF11-204ENST00000395454 CD55P08174 381 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms